RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CSB-PGBD3P0DP91 1061 aa18.43■□□□□ 0.54
RAB11FIP3-207ENST00000461009 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
RAB11FIP3-207ENST00000461009 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
RAB11FIP3-207ENST00000461009 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
RAB11FIP3-207ENST00000461009 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
RAB11FIP3-207ENST00000461009 CDCA7Q9BWT1 371 aaPredicted RBP18.41■□□□□ 0.54
RAB11FIP3-207ENST00000461009 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
RAB11FIP3-207ENST00000461009 TRIM37O94972 964 aa18.4■□□□□ 0.54
RAB11FIP3-207ENST00000461009 WDR17Q8IZU2 1322 aa18.4■□□□□ 0.54
RAB11FIP3-207ENST00000461009 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
RAB11FIP3-207ENST00000461009 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
RAB11FIP3-207ENST00000461009 USP31Q70CQ4 1352 aa18.39■□□□□ 0.53
RAB11FIP3-207ENST00000461009 EDC4Q6P2E9 1401 aaKnown RBP18.39■□□□□ 0.53
RAB11FIP3-207ENST00000461009 DDB1Q16531 1140 aa18.38■□□□□ 0.53
RAB11FIP3-207ENST00000461009 NME9Q86XW9 330 aa18.38■□□□□ 0.53
RAB11FIP3-207ENST00000461009 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
RAB11FIP3-207ENST00000461009 APBA3O96018 575 aa18.37■□□□□ 0.53
RAB11FIP3-207ENST00000461009 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
RAB11FIP3-207ENST00000461009 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
RAB11FIP3-207ENST00000461009 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
RAB11FIP3-207ENST00000461009 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
RAB11FIP3-207ENST00000461009 COL18A1P39060 1754 aa18.34■□□□□ 0.53
RAB11FIP3-207ENST00000461009 ABCC6O95255 1503 aa18.33■□□□□ 0.53
RAB11FIP3-207ENST00000461009 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.53
RAB11FIP3-207ENST00000461009 PARP4Q9UKK3 1724 aaKnown RBP18.33■□□□□ 0.52
RAB11FIP3-207ENST00000461009 COG3Q96JB2 828 aa18.33■□□□□ 0.52
RAB11FIP3-207ENST00000461009 NFAT5O94916 1531 aa18.33■□□□□ 0.52
RAB11FIP3-207ENST00000461009 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 EXOC5O00471 708 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
RAB11FIP3-207ENST00000461009 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
RAB11FIP3-207ENST00000461009 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
RAB11FIP3-207ENST00000461009 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
RAB11FIP3-207ENST00000461009 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
RAB11FIP3-207ENST00000461009 USP54Q70EL1 1684 aa18.29■□□□□ 0.52
RAB11FIP3-207ENST00000461009 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
RAB11FIP3-207ENST00000461009 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
RAB11FIP3-207ENST00000461009 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
RAB11FIP3-207ENST00000461009 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
RAB11FIP3-207ENST00000461009 ERBB3P21860 1342 aa18.27■□□□□ 0.52
RAB11FIP3-207ENST00000461009 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
RAB11FIP3-207ENST00000461009 AMPHP49418 695 aa18.26■□□□□ 0.51
RAB11FIP3-207ENST00000461009 R3HDM1Q15032 1099 aaKnown RBP18.26■□□□□ 0.51
RAB11FIP3-207ENST00000461009 IP6K1Q92551 441 aa18.26■□□□□ 0.51
RAB11FIP3-207ENST00000461009 LTN1O94822 1766 aa18.25■□□□□ 0.51
RAB11FIP3-207ENST00000461009 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
RAB11FIP3-207ENST00000461009 IL2RBP14784 551 aa18.25■□□□□ 0.51
RAB11FIP3-207ENST00000461009 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
RAB11FIP3-207ENST00000461009 MARCH10Q8NA82 808 aaPredicted RBP18.24■□□□□ 0.51
RAB11FIP3-207ENST00000461009 WNK3Q9BYP7 1800 aa18.22■□□□□ 0.51
RAB11FIP3-207ENST00000461009 PLSCR1O15162 318 aa18.22■□□□□ 0.51
RAB11FIP3-207ENST00000461009 LTV1Q96GA3 475 aaPredicted RBP18.22■□□□□ 0.51
RAB11FIP3-207ENST00000461009 BCL9O00512 1426 aa18.22■□□□□ 0.51
RAB11FIP3-207ENST00000461009 MYOM1P52179 1685 aa18.21■□□□□ 0.51
RAB11FIP3-207ENST00000461009 FYB1O15117 783 aa18.2■□□□□ 0.5
RAB11FIP3-207ENST00000461009 HOXC9P31274 260 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 TNS2Q63HR2 1409 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 PEAK1Q9H792 1746 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 MAP3K19Q56UN5 1328 aa18.19■□□□□ 0.5
RAB11FIP3-207ENST00000461009 PANK3Q9H999 370 aa18.18■□□□□ 0.5
RAB11FIP3-207ENST00000461009 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
RAB11FIP3-207ENST00000461009 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
RAB11FIP3-207ENST00000461009 LRP5O75197 1615 aa18.16■□□□□ 0.5
RAB11FIP3-207ENST00000461009 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
RAB11FIP3-207ENST00000461009 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
RAB11FIP3-207ENST00000461009 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
RAB11FIP3-207ENST00000461009 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
RAB11FIP3-207ENST00000461009 RREB1Q92766 1687 aa18.15■□□□□ 0.5
RAB11FIP3-207ENST00000461009 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
RAB11FIP3-207ENST00000461009 SRCAPQ6ZRS2 3230 aa18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 RGPD3A6NKT7 1758 aaPredicted RBP18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 RGPD4Q7Z3J3 1758 aa18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 FBLN1P23142 703 aa18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
RAB11FIP3-207ENST00000461009 NUP188Q5SRE5 1749 aa18.12■□□□□ 0.49
RAB11FIP3-207ENST00000461009 KIF20BQ96Q89 1820 aa18.12■□□□□ 0.49
RAB11FIP3-207ENST00000461009 PTF1AQ7RTS3 328 aa18.11■□□□□ 0.49
RAB11FIP3-207ENST00000461009 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
RAB11FIP3-207ENST00000461009 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 KCNQ2O43526 872 aa18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 STK32BQ9NY57 414 aa18.1■□□□□ 0.49
RAB11FIP3-207ENST00000461009 FLT4P35916 1363 aa18.09■□□□□ 0.49
RAB11FIP3-207ENST00000461009 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
RAB11FIP3-207ENST00000461009 INSRP06213 1382 aa18.08■□□□□ 0.49
RAB11FIP3-207ENST00000461009 PPM1GO15355 546 aaPredicted RBP18.08■□□□□ 0.48
RAB11FIP3-207ENST00000461009 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
RAB11FIP3-207ENST00000461009 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
RAB11FIP3-207ENST00000461009 HSP90AB2PQ58FF8 381 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms