RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 FAM98CQ17RN3 349 aaKnown RBP30.76■■■□□ 2.51
C9orf3-209ENST00000460573 CHRNA2Q15822 529 aa30.75■■■□□ 2.51
C9orf3-209ENST00000460573 STRN4Q9NRL3 753 aa30.75■■■□□ 2.51
C9orf3-209ENST00000460573 KRT27Q7Z3Y8 459 aa30.74■■■□□ 2.51
C9orf3-209ENST00000460573 ZNF316A6NFI3 1004 aaPredicted RBP30.73■■■□□ 2.51
C9orf3-209ENST00000460573 NFAT5O94916 1531 aa30.73■■■□□ 2.51
C9orf3-209ENST00000460573 EVA1CP58658 441 aa30.72■■■□□ 2.51
C9orf3-209ENST00000460573 ARHGEF25Q86VW2 580 aa30.71■■■□□ 2.51
C9orf3-209ENST00000460573 SOX12O15370 315 aa30.7■■■□□ 2.51
C9orf3-209ENST00000460573 AMER1Q5JTC6 1135 aaPredicted RBP30.7■■■□□ 2.51
C9orf3-209ENST00000460573 ZBTB7CA1YPR0 619 aa30.69■■■□□ 2.5
C9orf3-209ENST00000460573 BLMP54132 1417 aaPredicted RBP30.68■■■□□ 2.5
C9orf3-209ENST00000460573 ONECUT3O60422 494 aaPredicted RBP30.68■■■□□ 2.5
C9orf3-209ENST00000460573 SPATA31A5Q5VU36 1347 aa30.68■■■□□ 2.5
C9orf3-209ENST00000460573 SPATA31A7Q8IWB4 1347 aa30.68■■■□□ 2.5
C9orf3-209ENST00000460573 AATKQ6ZMQ8 1374 aa30.67■■■□□ 2.5
C9orf3-209ENST00000460573 NPC1L1Q9UHC9 1359 aa30.67■■■□□ 2.5
C9orf3-209ENST00000460573 ANKRD26Q9UPS8 1709 aa30.66■■■□□ 2.5
C9orf3-209ENST00000460573 ABCC6O95255 1503 aa30.64■■■□□ 2.5
C9orf3-209ENST00000460573 USP35Q9P2H5 1018 aa30.64■■■□□ 2.5
C9orf3-209ENST00000460573 DDX10Q13206 875 aaKnown RBP30.62■■■□□ 2.49
C9orf3-209ENST00000460573 MORC1Q86VD1 984 aa30.62■■■□□ 2.49
C9orf3-209ENST00000460573 LMO7Q8WWI1 1683 aa30.61■■■□□ 2.49
C9orf3-209ENST00000460573 EP400Q96L91 3159 aa30.6■■■□□ 2.49
C9orf3-209ENST00000460573 SPATA31A1Q5TZJ5 1347 aa30.59■■■□□ 2.49
C9orf3-209ENST00000460573 MAP3K19Q56UN5 1328 aa30.58■■■□□ 2.49
C9orf3-209ENST00000460573 LTN1O94822 1766 aa30.58■■■□□ 2.49
C9orf3-209ENST00000460573 COL18A1P39060 1754 aa30.58■■■□□ 2.49
C9orf3-209ENST00000460573 CAMTA1Q9Y6Y1 1673 aa30.58■■■□□ 2.49
C9orf3-209ENST00000460573 KIF24Q5T7B8 1368 aa30.57■■■□□ 2.48
C9orf3-209ENST00000460573 CC2D1BQ5T0F9 858 aaKnown RBP30.57■■■□□ 2.48
C9orf3-209ENST00000460573 FBLN1P23142 703 aa30.56■■■□□ 2.48
C9orf3-209ENST00000460573 AMPHP49418 695 aa30.56■■■□□ 2.48
C9orf3-209ENST00000460573 IP6K1Q92551 441 aa30.56■■■□□ 2.48
C9orf3-209ENST00000460573 RTL1A6NKG5 1358 aa30.55■■■□□ 2.48
C9orf3-209ENST00000460573 RRS1Q15050 365 aaKnown RBP30.55■■■□□ 2.48
C9orf3-209ENST00000460573 AXIN2Q9Y2T1 843 aa30.55■■■□□ 2.48
C9orf3-209ENST00000460573 BAG6P46379 1132 aa30.54■■■□□ 2.48
C9orf3-209ENST00000460573 DEFB132Q7Z7B7 95 aa30.54■■■□□ 2.48
C9orf3-209ENST00000460573 THSD7AQ9UPZ6 1657 aa30.54■■■□□ 2.48
C9orf3-209ENST00000460573 COL5A2P05997 1499 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-209ENST00000460573 TNNT2P45379 298 aaPredicted RBP30.52■■■□□ 2.48
C9orf3-209ENST00000460573 LARP1Q6PKG0 1096 aaKnown RBP30.52■■■□□ 2.48
C9orf3-209ENST00000460573 HOXC9P31274 260 aa30.51■■■□□ 2.47
C9orf3-209ENST00000460573 FAM182BQ5T319 152 aa30.51■■■□□ 2.47
C9orf3-209ENST00000460573 PDE3BQ13370 1112 aa30.5■■■□□ 2.47
C9orf3-209ENST00000460573 TCP11L2Q8N4U5 519 aa30.5■■■□□ 2.47
C9orf3-209ENST00000460573 POLKQ9UBT6 870 aa30.5■■■□□ 2.47
C9orf3-209ENST00000460573 FLT4P35916 1363 aa30.5■■■□□ 2.47
C9orf3-209ENST00000460573 RGPD1P0DJD0 1748 aa30.5■■■□□ 2.47
C9orf3-209ENST00000460573 EMILIN1Q9Y6C2 1016 aa30.48■■■□□ 2.47
C9orf3-209ENST00000460573 MAP2P11137 1827 aaKnown RBP30.47■■■□□ 2.47
C9orf3-209ENST00000460573 WDR17Q8IZU2 1322 aa30.47■■■□□ 2.47
C9orf3-209ENST00000460573 BARGINQ6ZT62 677 aa30.46■■■□□ 2.47
C9orf3-209ENST00000460573 THRAP3Q9Y2W1 955 aaKnown RBP30.45■■■□□ 2.47
C9orf3-209ENST00000460573 RGPD5Q99666 1765 aa30.45■■■□□ 2.46
C9orf3-209ENST00000460573 ERBB3P21860 1342 aa30.45■■■□□ 2.46
C9orf3-209ENST00000460573 INSRP06213 1382 aa30.44■■■□□ 2.46
C9orf3-209ENST00000460573 PPM1GO15355 546 aaPredicted RBP30.44■■■□□ 2.46
C9orf3-209ENST00000460573 CSB-PGBD3P0DP91 1061 aa30.44■■■□□ 2.46
C9orf3-209ENST00000460573 CNGB1Q14028 1251 aaPredicted RBP30.44■■■□□ 2.46
C9orf3-209ENST00000460573 ANKRD24Q8TF21 1146 aa30.44■■■□□ 2.46
C9orf3-209ENST00000460573 CRB1P82279 1406 aa30.44■■■□□ 2.46
C9orf3-209ENST00000460573 SMG6Q86US8 1419 aaKnown RBP30.44■■■□□ 2.46
C9orf3-209ENST00000460573 FAM196AQ6ZSG2 479 aa30.43■■■□□ 2.46
C9orf3-209ENST00000460573 TOM1L2Q6ZVM7 507 aa30.43■■■□□ 2.46
C9orf3-209ENST00000460573 PEAK1Q9H792 1746 aa30.42■■■□□ 2.46
C9orf3-209ENST00000460573 HSP90AB2PQ58FF8 381 aa30.4■■■□□ 2.46
C9orf3-209ENST00000460573 CARD10Q9BWT7 1032 aa30.38■■■□□ 2.45
C9orf3-209ENST00000460573 TRIM37O94972 964 aa30.37■■■□□ 2.45
C9orf3-209ENST00000460573 EN1Q05925 392 aaPredicted RBP30.37■■■□□ 2.45
C9orf3-209ENST00000460573 RALBP1Q15311 655 aa30.37■■■□□ 2.45
C9orf3-209ENST00000460573 PARD3Q8TEW0 1356 aa30.37■■■□□ 2.45
C9orf3-209ENST00000460573 LTV1Q96GA3 475 aaPredicted RBP30.36■■■□□ 2.45
C9orf3-209ENST00000460573 FAM208AQ9UK61 1670 aaKnown RBP30.36■■■□□ 2.45
C9orf3-209ENST00000460573 MTHFSP49914 203 aa30.35■■■□□ 2.45
C9orf3-209ENST00000460573 NLRP2Q9NX02 1062 aa30.35■■■□□ 2.45
C9orf3-209ENST00000460573 TNS1Q9HBL0 1735 aaKnown RBP30.33■■■□□ 2.45
C9orf3-209ENST00000460573 PARP4Q9UKK3 1724 aaKnown RBP30.33■■■□□ 2.45
C9orf3-209ENST00000460573 PPP2R1AP30153 589 aa30.32■■■□□ 2.44
C9orf3-209ENST00000460573 APBA3O96018 575 aa30.31■■■□□ 2.44
C9orf3-209ENST00000460573 DDB1Q16531 1140 aa30.3■■■□□ 2.44
C9orf3-209ENST00000460573 CDCA7Q9BWT1 371 aaPredicted RBP30.3■■■□□ 2.44
C9orf3-209ENST00000460573 EIF4A2Q14240 407 aaKnown RBP30.27■■■□□ 2.44
C9orf3-209ENST00000460573 PSDA5PKW4 1024 aaPredicted RBP30.26■■■□□ 2.43
C9orf3-209ENST00000460573 NBPF6Q5VWK0 638 aa30.26■■■□□ 2.43
C9orf3-209ENST00000460573 NBPF4Q96M43 638 aa30.26■■■□□ 2.43
C9orf3-209ENST00000460573 CFAP53Q96M91 514 aa30.26■■■□□ 2.43
C9orf3-209ENST00000460573 WNK3Q9BYP7 1800 aa30.26■■■□□ 2.43
C9orf3-209ENST00000460573 DISP2A7MBM2 1401 aa30.25■■■□□ 2.43
C9orf3-209ENST00000460573 EZH2Q15910 746 aaKnown RBP30.25■■■□□ 2.43
C9orf3-209ENST00000460573 OVOS2A0A0G2JMS6 1433 aa30.24■■■□□ 2.43
C9orf3-209ENST00000460573 PRKRIP1Q9H875 184 aaPredicted RBP30.24■■■□□ 2.43
C9orf3-209ENST00000460573 LRRC37A3O60309 1634 aa30.24■■■□□ 2.43
C9orf3-209ENST00000460573 MYBBP1AQ9BQG0 1328 aaKnown RBP30.22■■■□□ 2.43
C9orf3-209ENST00000460573 DIAPH1O60610 1272 aaKnown RBP30.21■■■□□ 2.43
C9orf3-209ENST00000460573 IL2RBP14784 551 aa30.21■■■□□ 2.43
C9orf3-209ENST00000460573 IL13P35225 146 aa30.21■■■□□ 2.43
C9orf3-209ENST00000460573 EYA1Q99502 592 aa30.21■■■□□ 2.43
C9orf3-209ENST00000460573 RGPD2P0DJD1 1756 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms