RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
VPS45-204ENST00000460366 MYOM1P52179 1685 aa13.66□□□□□ -0.22
VPS45-204ENST00000460366 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
VPS45-204ENST00000460366 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
VPS45-204ENST00000460366 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
VPS45-204ENST00000460366 FYB1O15117 783 aa13.65□□□□□ -0.22
VPS45-204ENST00000460366 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
VPS45-204ENST00000460366 NME9Q86XW9 330 aa13.65□□□□□ -0.22
VPS45-204ENST00000460366 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
VPS45-204ENST00000460366 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
VPS45-204ENST00000460366 MS4A3Q96HJ5 214 aa13.65□□□□□ -0.22
VPS45-204ENST00000460366 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
VPS45-204ENST00000460366 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 GCP02774 474 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
VPS45-204ENST00000460366 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 CABLES1Q8TDN4 633 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
VPS45-204ENST00000460366 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
VPS45-204ENST00000460366 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
VPS45-204ENST00000460366 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
VPS45-204ENST00000460366 COG3Q96JB2 828 aa13.62□□□□□ -0.23
VPS45-204ENST00000460366 LRP6O75581 1613 aa13.61□□□□□ -0.23
VPS45-204ENST00000460366 PIK3C2AO00443 1686 aa13.61□□□□□ -0.23
VPS45-204ENST00000460366 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
VPS45-204ENST00000460366 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
VPS45-204ENST00000460366 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
VPS45-204ENST00000460366 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
VPS45-204ENST00000460366 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
VPS45-204ENST00000460366 CPDO75976 1380 aa13.6□□□□□ -0.23
VPS45-204ENST00000460366 NSD2O96028 1365 aa13.6□□□□□ -0.23
VPS45-204ENST00000460366 SLIT3O75094 1523 aa13.6□□□□□ -0.23
VPS45-204ENST00000460366 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
VPS45-204ENST00000460366 NPC1L1Q9UHC9 1359 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
VPS45-204ENST00000460366 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
VPS45-204ENST00000460366 MAP3K13O43283 966 aa13.58□□□□□ -0.24
VPS45-204ENST00000460366 ARHGEF25Q86VW2 580 aa13.58□□□□□ -0.24
VPS45-204ENST00000460366 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
VPS45-204ENST00000460366 ZC3H6P61129 1189 aaKnown RBP13.57□□□□□ -0.24
VPS45-204ENST00000460366 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
VPS45-204ENST00000460366 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
VPS45-204ENST00000460366 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
VPS45-204ENST00000460366 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
VPS45-204ENST00000460366 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
VPS45-204ENST00000460366 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
VPS45-204ENST00000460366 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
VPS45-204ENST00000460366 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
VPS45-204ENST00000460366 SLIT2O94813 1529 aa13.54□□□□□ -0.24
VPS45-204ENST00000460366 NFAT5O94916 1531 aa13.54□□□□□ -0.24
VPS45-204ENST00000460366 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
VPS45-204ENST00000460366 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
VPS45-204ENST00000460366 AFF2P51816 1311 aa13.54□□□□□ -0.24
VPS45-204ENST00000460366 CHRNA2Q15822 529 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 MORC1Q86VD1 984 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 USP21Q9UK80 565 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
VPS45-204ENST00000460366 SOX12O15370 315 aa13.52□□□□□ -0.25
VPS45-204ENST00000460366 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.25
VPS45-204ENST00000460366 BCL9LQ86UU0 1499 aa13.52□□□□□ -0.25
VPS45-204ENST00000460366 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
VPS45-204ENST00000460366 ABCC6O95255 1503 aa13.51□□□□□ -0.25
VPS45-204ENST00000460366 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
VPS45-204ENST00000460366 IP6K1Q92551 441 aa13.51□□□□□ -0.25
VPS45-204ENST00000460366 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
VPS45-204ENST00000460366 TRPC5Q9UL62 973 aaPredicted RBP13.51□□□□□ -0.25
VPS45-204ENST00000460366 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
VPS45-204ENST00000460366 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
VPS45-204ENST00000460366 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 FBLN1P23142 703 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 AMPHP49418 695 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 EVA1CP58658 441 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
VPS45-204ENST00000460366 VPS72Q15906 364 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
VPS45-204ENST00000460366 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
VPS45-204ENST00000460366 ATRNO75882 1429 aa13.48□□□□□ -0.25
VPS45-204ENST00000460366 NWD2Q9ULI1 1742 aa13.48□□□□□ -0.25
VPS45-204ENST00000460366 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
VPS45-204ENST00000460366 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
VPS45-204ENST00000460366 HOXC9P31274 260 aa13.48□□□□□ -0.25
VPS45-204ENST00000460366 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
VPS45-204ENST00000460366 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
VPS45-204ENST00000460366 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
VPS45-204ENST00000460366 COL18A1P39060 1754 aa13.47□□□□□ -0.25
VPS45-204ENST00000460366 FLT4P35916 1363 aa13.46□□□□□ -0.25
VPS45-204ENST00000460366 PYGBP11216 843 aa13.46□□□□□ -0.25
VPS45-204ENST00000460366 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
VPS45-204ENST00000460366 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
VPS45-204ENST00000460366 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms