RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 BAG6P46379 1132 aa14.09□□□□□ -0.15
HDLBP-228ENST00000459788 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
HDLBP-228ENST00000459788 CDCA7Q9BWT1 371 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-228ENST00000459788 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
HDLBP-228ENST00000459788 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
HDLBP-228ENST00000459788 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
HDLBP-228ENST00000459788 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
HDLBP-228ENST00000459788 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
HDLBP-228ENST00000459788 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
HDLBP-228ENST00000459788 USP47Q96K76 1375 aa14.07□□□□□ -0.16
HDLBP-228ENST00000459788 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
HDLBP-228ENST00000459788 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
HDLBP-228ENST00000459788 A0A1W2PP64 1363 aa14.06□□□□□ -0.16
HDLBP-228ENST00000459788 RGPD3A6NKT7 1758 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-228ENST00000459788 RGPD4Q7Z3J3 1758 aa14.06□□□□□ -0.16
HDLBP-228ENST00000459788 LRRC37A3O60309 1634 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 PEAK1Q9H792 1746 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 TMF1P82094 1093 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 SLC12A5Q9H2X9 1139 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 CCDC7Q96M83 1385 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 BCL9O00512 1426 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
HDLBP-228ENST00000459788 CARD10Q9BWT7 1032 aa14.04□□□□□ -0.16
HDLBP-228ENST00000459788 ANKRD36BQ8N2N9 1353 aa14.04□□□□□ -0.16
HDLBP-228ENST00000459788 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
HDLBP-228ENST00000459788 USP35Q9P2H5 1018 aa14.03□□□□□ -0.16
HDLBP-228ENST00000459788 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
HDLBP-228ENST00000459788 RREB1Q92766 1687 aa14.02□□□□□ -0.16
HDLBP-228ENST00000459788 OVOS2A0A0G2JMS6 1433 aa14.02□□□□□ -0.16
HDLBP-228ENST00000459788 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
HDLBP-228ENST00000459788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDLBP-228ENST00000459788 KIF20BQ96Q89 1820 aa14.01□□□□□ -0.17
HDLBP-228ENST00000459788 NME9Q86XW9 330 aa14.01□□□□□ -0.17
HDLBP-228ENST00000459788 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
HDLBP-228ENST00000459788 DDB1Q16531 1140 aa14□□□□□ -0.17
HDLBP-228ENST00000459788 LRP5O75197 1615 aa14□□□□□ -0.17
HDLBP-228ENST00000459788 ERBB3P21860 1342 aa13.99□□□□□ -0.17
HDLBP-228ENST00000459788 MYOM1P52179 1685 aa13.99□□□□□ -0.17
HDLBP-228ENST00000459788 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
HDLBP-228ENST00000459788 COG3Q96JB2 828 aa13.98□□□□□ -0.17
HDLBP-228ENST00000459788 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
HDLBP-228ENST00000459788 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
HDLBP-228ENST00000459788 TRIM37O94972 964 aa13.97□□□□□ -0.17
HDLBP-228ENST00000459788 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
HDLBP-228ENST00000459788 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
HDLBP-228ENST00000459788 IP6K1Q92551 441 aa13.97□□□□□ -0.17
HDLBP-228ENST00000459788 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
HDLBP-228ENST00000459788 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
HDLBP-228ENST00000459788 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
HDLBP-228ENST00000459788 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
HDLBP-228ENST00000459788 TNS2Q63HR2 1409 aa13.96□□□□□ -0.18
HDLBP-228ENST00000459788 EXOC5O00471 708 aa13.95□□□□□ -0.18
HDLBP-228ENST00000459788 PLSCR1O15162 318 aa13.95□□□□□ -0.18
HDLBP-228ENST00000459788 SOX12O15370 315 aa13.95□□□□□ -0.18
HDLBP-228ENST00000459788 APBA3O96018 575 aa13.95□□□□□ -0.18
HDLBP-228ENST00000459788 KAT6BQ8WYB5 2073 aa13.95□□□□□ -0.18
HDLBP-228ENST00000459788 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-228ENST00000459788 ANKRD24Q8TF21 1146 aa13.93□□□□□ -0.18
HDLBP-228ENST00000459788 NHSQ6T4R5 1651 aa13.93□□□□□ -0.18
HDLBP-228ENST00000459788 FYB1O15117 783 aa13.92□□□□□ -0.18
HDLBP-228ENST00000459788 IL2RBP14784 551 aa13.92□□□□□ -0.18
HDLBP-228ENST00000459788 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
HDLBP-228ENST00000459788 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-228ENST00000459788 ANKRD26Q9UPS8 1709 aa13.92□□□□□ -0.18
HDLBP-228ENST00000459788 NBPF14Q5TI25 921 aa13.91□□□□□ -0.18
HDLBP-228ENST00000459788 CCER1Q8TC90 406 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-228ENST00000459788 NLRP2Q9NX02 1062 aa13.91□□□□□ -0.18
HDLBP-228ENST00000459788 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
HDLBP-228ENST00000459788 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
HDLBP-228ENST00000459788 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
HDLBP-228ENST00000459788 HOXC9P31274 260 aa13.9□□□□□ -0.18
HDLBP-228ENST00000459788 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDLBP-228ENST00000459788 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
HDLBP-228ENST00000459788 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
HDLBP-228ENST00000459788 AMPHP49418 695 aa13.88□□□□□ -0.19
HDLBP-228ENST00000459788 INSRP06213 1382 aa13.87□□□□□ -0.19
HDLBP-228ENST00000459788 FLT4P35916 1363 aa13.87□□□□□ -0.19
HDLBP-228ENST00000459788 BTAF1O14981 1849 aa13.87□□□□□ -0.19
HDLBP-228ENST00000459788 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
HDLBP-228ENST00000459788 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
HDLBP-228ENST00000459788 SHANK3Q9BYB0 1731 aa13.86□□□□□ -0.19
HDLBP-228ENST00000459788 R3HDM1Q15032 1099 aaKnown RBP13.85□□□□□ -0.19
HDLBP-228ENST00000459788 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
HDLBP-228ENST00000459788 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-228ENST00000459788 NSD2O96028 1365 aa13.83□□□□□ -0.19
HDLBP-228ENST00000459788 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
HDLBP-228ENST00000459788 NCAPD2Q15021 1401 aa13.82□□□□□ -0.2
HDLBP-228ENST00000459788 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
HDLBP-228ENST00000459788 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
HDLBP-228ENST00000459788 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
HDLBP-228ENST00000459788 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
HDLBP-228ENST00000459788 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
HDLBP-228ENST00000459788 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-228ENST00000459788 LY75O60449 1722 aa13.81□□□□□ -0.2
HDLBP-228ENST00000459788 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
HDLBP-228ENST00000459788 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
HDLBP-228ENST00000459788 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
HDLBP-228ENST00000459788 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
HDLBP-228ENST00000459788 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms