RNA–Protein interactions for RNA: ENST00000458012.2

POLR1B-210, Transcript of RNA polymerase I subunit B, humanhuman

TSL 5

Gene POLR1B, Length 923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-210ENST00000458012 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
POLR1B-210ENST00000458012 TNS1Q9HBL0 1735 aaKnown RBP12.7□□□□□ -0.38
POLR1B-210ENST00000458012 USP6P35125 1406 aa12.7□□□□□ -0.38
POLR1B-210ENST00000458012 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
POLR1B-210ENST00000458012 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
POLR1B-210ENST00000458012 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
POLR1B-210ENST00000458012 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
POLR1B-210ENST00000458012 CRB1P82279 1406 aa12.69□□□□□ -0.38
POLR1B-210ENST00000458012 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
POLR1B-210ENST00000458012 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
POLR1B-210ENST00000458012 LMO7Q8WWI1 1683 aa12.68□□□□□ -0.38
POLR1B-210ENST00000458012 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
POLR1B-210ENST00000458012 POLA2Q14181 598 aa12.67□□□□□ -0.38
POLR1B-210ENST00000458012 DDB1Q16531 1140 aa12.67□□□□□ -0.38
POLR1B-210ENST00000458012 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
POLR1B-210ENST00000458012 TTC21BQ7Z4L5 1316 aa12.65□□□□□ -0.38
POLR1B-210ENST00000458012 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
POLR1B-210ENST00000458012 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.38
POLR1B-210ENST00000458012 TRPM1Q7Z4N2 1603 aa12.65□□□□□ -0.38
POLR1B-210ENST00000458012 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
POLR1B-210ENST00000458012 SLIT3O75094 1523 aa12.64□□□□□ -0.39
POLR1B-210ENST00000458012 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
POLR1B-210ENST00000458012 OVOS2A0A0G2JMS6 1433 aa12.63□□□□□ -0.39
POLR1B-210ENST00000458012 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
POLR1B-210ENST00000458012 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
POLR1B-210ENST00000458012 SOX12O15370 315 aa12.63□□□□□ -0.39
POLR1B-210ENST00000458012 ARHGEF25Q86VW2 580 aa12.63□□□□□ -0.39
POLR1B-210ENST00000458012 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
POLR1B-210ENST00000458012 EXOC5O00471 708 aa12.62□□□□□ -0.39
POLR1B-210ENST00000458012 PLSCR1O15162 318 aa12.62□□□□□ -0.39
POLR1B-210ENST00000458012 CARD10Q9BWT7 1032 aa12.62□□□□□ -0.39
POLR1B-210ENST00000458012 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
POLR1B-210ENST00000458012 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
POLR1B-210ENST00000458012 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
POLR1B-210ENST00000458012 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
POLR1B-210ENST00000458012 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
POLR1B-210ENST00000458012 CPSF1Q10570 1443 aaKnown RBP12.61□□□□□ -0.39
POLR1B-210ENST00000458012 PIK3C2AO00443 1686 aa12.61□□□□□ -0.39
POLR1B-210ENST00000458012 RREB1Q92766 1687 aa12.61□□□□□ -0.39
POLR1B-210ENST00000458012 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
POLR1B-210ENST00000458012 HDGFL2Q7Z4V5 671 aaPredicted RBP12.6□□□□□ -0.39
POLR1B-210ENST00000458012 COL18A1P39060 1754 aa12.59□□□□□ -0.39
POLR1B-210ENST00000458012 AKAP12Q02952 1782 aa12.59□□□□□ -0.39
POLR1B-210ENST00000458012 KCNQ2O43526 872 aa12.59□□□□□ -0.39
POLR1B-210ENST00000458012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
POLR1B-210ENST00000458012 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
POLR1B-210ENST00000458012 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
POLR1B-210ENST00000458012 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
POLR1B-210ENST00000458012 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
POLR1B-210ENST00000458012 LRRC37A3O60309 1634 aa12.58□□□□□ -0.4
POLR1B-210ENST00000458012 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
POLR1B-210ENST00000458012 SRCAPQ6ZRS2 3230 aa12.57□□□□□ -0.4
POLR1B-210ENST00000458012 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
POLR1B-210ENST00000458012 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
POLR1B-210ENST00000458012 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
POLR1B-210ENST00000458012 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
POLR1B-210ENST00000458012 SBF2Q86WG5 1849 aa12.56□□□□□ -0.4
POLR1B-210ENST00000458012 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
POLR1B-210ENST00000458012 BCL9O00512 1426 aa12.55□□□□□ -0.4
POLR1B-210ENST00000458012 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
POLR1B-210ENST00000458012 NME9Q86XW9 330 aa12.55□□□□□ -0.4
POLR1B-210ENST00000458012 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
POLR1B-210ENST00000458012 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
POLR1B-210ENST00000458012 RGPD3A6NKT7 1758 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-210ENST00000458012 RGPD4Q7Z3J3 1758 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 ABCC6O95255 1503 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
POLR1B-210ENST00000458012 NFAT5O94916 1531 aa12.53□□□□□ -0.4
POLR1B-210ENST00000458012 IL2RBP14784 551 aa12.53□□□□□ -0.4
POLR1B-210ENST00000458012 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
POLR1B-210ENST00000458012 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
POLR1B-210ENST00000458012 PROM2Q8N271 834 aa12.52□□□□□ -0.41
POLR1B-210ENST00000458012 ANKRD24Q8TF21 1146 aa12.52□□□□□ -0.41
POLR1B-210ENST00000458012 ERBB3P21860 1342 aa12.52□□□□□ -0.41
POLR1B-210ENST00000458012 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
POLR1B-210ENST00000458012 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
POLR1B-210ENST00000458012 YY1P25490 414 aa12.5□□□□□ -0.41
POLR1B-210ENST00000458012 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
POLR1B-210ENST00000458012 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
POLR1B-210ENST00000458012 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-210ENST00000458012 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
POLR1B-210ENST00000458012 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
POLR1B-210ENST00000458012 IP6K1Q92551 441 aa12.49□□□□□ -0.41
POLR1B-210ENST00000458012 COG3Q96JB2 828 aa12.49□□□□□ -0.41
POLR1B-210ENST00000458012 LTN1O94822 1766 aa12.48□□□□□ -0.41
POLR1B-210ENST00000458012 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
POLR1B-210ENST00000458012 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
POLR1B-210ENST00000458012 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
POLR1B-210ENST00000458012 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-210ENST00000458012 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
POLR1B-210ENST00000458012 ZBTB22O15209 634 aa12.47□□□□□ -0.41
POLR1B-210ENST00000458012 LTV1Q96GA3 475 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-210ENST00000458012 AMPHP49418 695 aa12.46□□□□□ -0.41
POLR1B-210ENST00000458012 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
POLR1B-210ENST00000458012 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.41
POLR1B-210ENST00000458012 MTFR1LQ9H019 292 aa12.46□□□□□ -0.41
POLR1B-210ENST00000458012 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms