RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
PKP4-207ENST00000457109 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
PKP4-207ENST00000457109 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
PKP4-207ENST00000457109 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
PKP4-207ENST00000457109 PLSCR1O15162 318 aa12.41□□□□□ -0.42
PKP4-207ENST00000457109 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
PKP4-207ENST00000457109 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
PKP4-207ENST00000457109 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
PKP4-207ENST00000457109 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
PKP4-207ENST00000457109 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
PKP4-207ENST00000457109 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
PKP4-207ENST00000457109 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
PKP4-207ENST00000457109 NME9Q86XW9 330 aa12.39□□□□□ -0.43
PKP4-207ENST00000457109 MARCH10Q8NA82 808 aaPredicted RBP12.39□□□□□ -0.43
PKP4-207ENST00000457109 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
PKP4-207ENST00000457109 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
PKP4-207ENST00000457109 CRYBG1Q9Y4K1 1723 aa12.39□□□□□ -0.43
PKP4-207ENST00000457109 SLIT3O75094 1523 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 KCNQ2O43526 872 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 IL2RBP14784 551 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
PKP4-207ENST00000457109 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 COG3Q96JB2 828 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
PKP4-207ENST00000457109 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
PKP4-207ENST00000457109 LMO7Q8WWI1 1683 aa12.35□□□□□ -0.43
PKP4-207ENST00000457109 USP31Q70CQ4 1352 aa12.35□□□□□ -0.43
PKP4-207ENST00000457109 AMPHP49418 695 aa12.35□□□□□ -0.43
PKP4-207ENST00000457109 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
PKP4-207ENST00000457109 TMF1P82094 1093 aa12.34□□□□□ -0.43
PKP4-207ENST00000457109 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
PKP4-207ENST00000457109 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
PKP4-207ENST00000457109 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
PKP4-207ENST00000457109 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
PKP4-207ENST00000457109 IP6K1Q92551 441 aa12.33□□□□□ -0.44
PKP4-207ENST00000457109 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
PKP4-207ENST00000457109 ERBB3P21860 1342 aa12.33□□□□□ -0.44
PKP4-207ENST00000457109 LRP5O75197 1615 aa12.33□□□□□ -0.44
PKP4-207ENST00000457109 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
PKP4-207ENST00000457109 BCL9O00512 1426 aa12.31□□□□□ -0.44
PKP4-207ENST00000457109 PTF1AQ7RTS3 328 aa12.31□□□□□ -0.44
PKP4-207ENST00000457109 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
PKP4-207ENST00000457109 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
PKP4-207ENST00000457109 PROM2Q8N271 834 aa12.3□□□□□ -0.44
PKP4-207ENST00000457109 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
PKP4-207ENST00000457109 TNS1Q9HBL0 1735 aaKnown RBP12.29□□□□□ -0.44
PKP4-207ENST00000457109 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
PKP4-207ENST00000457109 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
PKP4-207ENST00000457109 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
PKP4-207ENST00000457109 TESK2Q96S53 571 aa12.29□□□□□ -0.44
PKP4-207ENST00000457109 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
PKP4-207ENST00000457109 YY1P25490 414 aa12.28□□□□□ -0.44
PKP4-207ENST00000457109 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
PKP4-207ENST00000457109 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
PKP4-207ENST00000457109 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
PKP4-207ENST00000457109 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
PKP4-207ENST00000457109 NFAT5O94916 1531 aa12.27□□□□□ -0.45
PKP4-207ENST00000457109 ABCC6O95255 1503 aa12.27□□□□□ -0.45
PKP4-207ENST00000457109 HOXC9P31274 260 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 MAP3K19Q56UN5 1328 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
PKP4-207ENST00000457109 SLC27A3Q5K4L6 730 aa12.25□□□□□ -0.45
PKP4-207ENST00000457109 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
PKP4-207ENST00000457109 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
PKP4-207ENST00000457109 COL18A1P39060 1754 aa12.25□□□□□ -0.45
PKP4-207ENST00000457109 FYB1O15117 783 aa12.24□□□□□ -0.45
PKP4-207ENST00000457109 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
PKP4-207ENST00000457109 AKAP12Q02952 1782 aa12.24□□□□□ -0.45
PKP4-207ENST00000457109 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
PKP4-207ENST00000457109 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
PKP4-207ENST00000457109 USP47Q96K76 1375 aa12.23□□□□□ -0.45
PKP4-207ENST00000457109 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
PKP4-207ENST00000457109 FBLN1P23142 703 aa12.23□□□□□ -0.45
PKP4-207ENST00000457109 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
PKP4-207ENST00000457109 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
PKP4-207ENST00000457109 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
PKP4-207ENST00000457109 TFCP2L1Q9NZI6 479 aa12.23□□□□□ -0.45
PKP4-207ENST00000457109 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
PKP4-207ENST00000457109 POLD1P28340 1107 aa12.22□□□□□ -0.45
PKP4-207ENST00000457109 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
PKP4-207ENST00000457109 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
PKP4-207ENST00000457109 MSH5O43196 834 aa12.21□□□□□ -0.45
PKP4-207ENST00000457109 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
PKP4-207ENST00000457109 ARXQ96QS3 562 aa12.21□□□□□ -0.45
PKP4-207ENST00000457109 RREB1Q92766 1687 aa12.21□□□□□ -0.45
PKP4-207ENST00000457109 NUP188Q5SRE5 1749 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 NBPF6Q5VWK0 638 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 NBPF4Q96M43 638 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
PKP4-207ENST00000457109 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
PKP4-207ENST00000457109 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
PKP4-207ENST00000457109 PTGER2P43116 358 aa12.19□□□□□ -0.46
PKP4-207ENST00000457109 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
PKP4-207ENST00000457109 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms