RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
USP25-206ENST00000453553 C1QTNF2Q9BXJ5 285 aa9.29□□□□□ -0.92
USP25-206ENST00000453553 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
USP25-206ENST00000453553 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
USP25-206ENST00000453553 WNT7AO00755 349 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 WFS1O76024 890 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 DZIP3Q86Y13 1208 aaKnown RBP9.27□□□□□ -0.93
USP25-206ENST00000453553 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 ZNF592Q92610 1267 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 GLMNQ92990 594 aa9.27□□□□□ -0.93
USP25-206ENST00000453553 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
USP25-206ENST00000453553 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
USP25-206ENST00000453553 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
USP25-206ENST00000453553 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
USP25-206ENST00000453553 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
USP25-206ENST00000453553 AXIN1O15169 862 aa9.25□□□□□ -0.93
USP25-206ENST00000453553 SIAH2O43255 324 aa9.25□□□□□ -0.93
USP25-206ENST00000453553 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
USP25-206ENST00000453553 MRGPRX2Q96LB1 330 aa9.24□□□□□ -0.93
USP25-206ENST00000453553 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
USP25-206ENST00000453553 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
USP25-206ENST00000453553 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
USP25-206ENST00000453553 MPNDQ8N594 471 aa9.23□□□□□ -0.93
USP25-206ENST00000453553 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
USP25-206ENST00000453553 CDV3Q9UKY7 258 aaKnown RBP9.23□□□□□ -0.93
USP25-206ENST00000453553 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
USP25-206ENST00000453553 CDK15Q96Q40 435 aa9.22□□□□□ -0.93
USP25-206ENST00000453553 WIPF1O43516 503 aa9.21□□□□□ -0.94
USP25-206ENST00000453553 MAP4K5Q9Y4K4 846 aa9.21□□□□□ -0.94
USP25-206ENST00000453553 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
USP25-206ENST00000453553 VASH1Q7L8A9 365 aaPredicted RBP9.2□□□□□ -0.94
USP25-206ENST00000453553 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
USP25-206ENST00000453553 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
USP25-206ENST00000453553 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
USP25-206ENST00000453553 PHTF2Q8N3S3 785 aa9.19□□□□□ -0.94
USP25-206ENST00000453553 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
USP25-206ENST00000453553 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
USP25-206ENST00000453553 ESPNB1AK53 854 aa9.18□□□□□ -0.94
USP25-206ENST00000453553 GRM5P41594 1212 aa9.18□□□□□ -0.94
USP25-206ENST00000453553 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
USP25-206ENST00000453553 CCDC82Q8N4S0 544 aa9.18□□□□□ -0.94
USP25-206ENST00000453553 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
USP25-206ENST00000453553 CCDC97Q96F63 343 aaPredicted RBP9.18□□□□□ -0.94
USP25-206ENST00000453553 TLL2Q9Y6L7 1015 aa9.18□□□□□ -0.94
USP25-206ENST00000453553 SNRPBP14678 240 aaKnown RBP9.17□□□□□ -0.94
USP25-206ENST00000453553 SMPD1P17405 629 aa9.17□□□□□ -0.94
USP25-206ENST00000453553 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
USP25-206ENST00000453553 UCN2Q96RP3 112 aa9.17□□□□□ -0.94
USP25-206ENST00000453553 TTC24A2A3L6 582 aaPredicted RBP9.16□□□□□ -0.94
USP25-206ENST00000453553 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
USP25-206ENST00000453553 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
USP25-206ENST00000453553 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
USP25-206ENST00000453553 PIK3CDO00329 1044 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 ADH1CP00326 375 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 TBC1D9Q6ZT07 1266 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
USP25-206ENST00000453553 CHIC2Q9UKJ5 165 aa9.15□□□□□ -0.94
USP25-206ENST00000453553 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
USP25-206ENST00000453553 NR5A1Q13285 461 aa9.14□□□□□ -0.95
USP25-206ENST00000453553 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
USP25-206ENST00000453553 ARID3AQ99856 593 aa9.14□□□□□ -0.95
USP25-206ENST00000453553 ATP9BO43861 1147 aa9.13□□□□□ -0.95
USP25-206ENST00000453553 SKIP12755 728 aa9.13□□□□□ -0.95
USP25-206ENST00000453553 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
USP25-206ENST00000453553 TSGA10IPQ3SY00 556 aa9.13□□□□□ -0.95
USP25-206ENST00000453553 TERTO14746 1132 aaKnown RBP9.12□□□□□ -0.95
USP25-206ENST00000453553 FSHRP23945 695 aa9.12□□□□□ -0.95
USP25-206ENST00000453553 MAP7D1Q3KQU3 841 aa9.12□□□□□ -0.95
USP25-206ENST00000453553 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
USP25-206ENST00000453553 CCDC85AQ96PX6 553 aaPredicted RBP9.12□□□□□ -0.95
USP25-206ENST00000453553 WASF2Q9Y6W5 498 aa9.12□□□□□ -0.95
USP25-206ENST00000453553 J3QL48 77 aa9.11□□□□□ -0.95
USP25-206ENST00000453553 RAB15P59190 212 aa9.11□□□□□ -0.95
USP25-206ENST00000453553 CFAP70Q5T0N1 1121 aa9.11□□□□□ -0.95
USP25-206ENST00000453553 ERVH48-1M5A8F1 160 aa9.1□□□□□ -0.95
USP25-206ENST00000453553 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
USP25-206ENST00000453553 LMOD1P29536 600 aaPredicted RBP9.1□□□□□ -0.95
USP25-206ENST00000453553 DHX9Q08211 1270 aaKnown RBP9.1□□□□□ -0.95
USP25-206ENST00000453553 CCDC116Q8IYX3 515 aa9.1□□□□□ -0.95
USP25-206ENST00000453553 TRIM47Q96LD4 638 aa9.1□□□□□ -0.95
USP25-206ENST00000453553 MAFBQ9Y5Q3 323 aaPredicted RBP9.1□□□□□ -0.95
USP25-206ENST00000453553 NR3C2P08235 984 aa9.09□□□□□ -0.95
USP25-206ENST00000453553 NNTQ13423 1086 aa9.09□□□□□ -0.95
USP25-206ENST00000453553 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
USP25-206ENST00000453553 PCDHB11Q9Y5F2 797 aa9.09□□□□□ -0.95
USP25-206ENST00000453553 USP17L5A8MUK1 530 aa9.08□□□□□ -0.96
USP25-206ENST00000453553 RFX1P22670 979 aa9.08□□□□□ -0.96
USP25-206ENST00000453553 PLEKHM2Q8IWE5 1019 aa9.08□□□□□ -0.96
USP25-206ENST00000453553 HPS1Q92902 700 aa9.08□□□□□ -0.96
USP25-206ENST00000453553 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
USP25-206ENST00000453553 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
USP25-206ENST00000453553 DEPDC4Q8N2C3 294 aa9.07□□□□□ -0.96
USP25-206ENST00000453553 TRIM52Q96A61 297 aa9.07□□□□□ -0.96
USP25-206ENST00000453553 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
USP25-206ENST00000453553 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms