RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 POM121Q96HA1 1249 aa6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 ARID4BQ4LE39 1312 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P21-201ENST00000452483 BRD1O95696 1058 aa6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 NR6A1Q15406 480 aa6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 TMEM259Q4ZIN3 620 aa6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 FOXJ1Q92949 421 aa6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 TLL2Q9Y6L7 1015 aa6.46□□□□□ -1.38
HMGB3P21-201ENST00000452483 J3QL48 77 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 SIAH2O43255 324 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 ALDH1A1P00352 501 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 SMPD1P17405 629 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 AGERQ15109 404 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 TRAF7Q6Q0C0 670 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 BPHLQ86WA6 291 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 GPKOWQ92917 476 aaPredicted RBP eCLIP6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 FKBPLQ9UIM3 349 aa6.45□□□□□ -1.38
HMGB3P21-201ENST00000452483 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
HMGB3P21-201ENST00000452483 SH3BP5LQ7L8J4 393 aa6.44□□□□□ -1.38
HMGB3P21-201ENST00000452483 SH3RF1Q7Z6J0 888 aa6.44□□□□□ -1.38
HMGB3P21-201ENST00000452483 ZC3H4Q9UPT8 1303 aaKnown RBP6.44□□□□□ -1.38
HMGB3P21-201ENST00000452483 MAGEB6P1A0A0J9YX57 407 aa6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 UNCXA6NJT0 531 aa6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 AVPP01185 164 aa6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 FAM174AQ8TBP5 190 aa6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 EPS8L1Q8TE68 723 aa6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 ZNF330Q9Y3S2 320 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P21-201ENST00000452483 ST8SIA5O15466 376 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 CRIPAKQ8N1N5 446 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 PNMA1Q8ND90 353 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 C1QTNF2Q9BXJ5 285 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 CARD14Q9BXL6 1004 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 TRIM34Q9BYJ4 488 aa6.42□□□□□ -1.38
HMGB3P21-201ENST00000452483 CTC1Q2NKJ3 1217 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 PDXDC2PQ6P474 469 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 SND1Q7KZF4 910 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 MPNDQ8N594 471 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 BANK1Q8NDB2 785 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 HPS1Q92902 700 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 GJD4Q96KN9 370 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 PSMD1Q99460 953 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 WASF2Q9Y6W5 498 aa6.41□□□□□ -1.38
HMGB3P21-201ENST00000452483 SOCS7O14512 581 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 SMARCA5O60264 1052 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 ADH1CP00326 375 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 CERS3Q8IU89 383 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 MTMR14Q8NCE2 650 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 ARHGAP9Q9BRR9 750 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 AAASQ9NRG9 546 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 IVNS1ABPQ9Y6Y0 642 aa6.4□□□□□ -1.38
HMGB3P21-201ENST00000452483 AXIN1O15169 862 aa6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 NCLP19338 710 aaKnown RBP6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 NNTQ13423 1086 aa6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 ARID5BQ14865 1188 aa6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 TRMT44Q8IYL2 757 aaKnown RBP6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
HMGB3P21-201ENST00000452483 CSB-PGBD3P0DP91 1061 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 PTK2Q05397 1052 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 ANKRD13AQ8IZ07 590 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 ZNF592Q92610 1267 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 SLC10A4Q96EP9 437 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 SPATA32Q96LK8 384 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 OCSTAMPQ9BR26 566 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 SNRKQ9NRH2 765 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 USTQ9Y2C2 406 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 GPSM3Q9Y4H4 160 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
HMGB3P21-201ENST00000452483 FSHRP23945 695 aa6.37□□□□□ -1.39
HMGB3P21-201ENST00000452483 ZBTB33Q86T24 672 aa6.37□□□□□ -1.39
HMGB3P21-201ENST00000452483 CALR3Q96L12 384 aaKnown RBP6.37□□□□□ -1.39
HMGB3P21-201ENST00000452483 BCCIPQ9P287 314 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB3P21-201ENST00000452483 NDUFB9Q9Y6M9 179 aa6.37□□□□□ -1.39
HMGB3P21-201ENST00000452483 RBM47A0AV96 593 aaKnown RBP6.36□□□□□ -1.39
HMGB3P21-201ENST00000452483 VASH1Q7L8A9 365 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P21-201ENST00000452483 ADAM32Q8TC27 787 aa6.36□□□□□ -1.39
HMGB3P21-201ENST00000452483 DRC1Q96MC2 740 aa6.36□□□□□ -1.39
HMGB3P21-201ENST00000452483 GPR37L1O60883 481 aa6.35□□□□□ -1.39
HMGB3P21-201ENST00000452483 NR3C2P08235 984 aa6.35□□□□□ -1.39
HMGB3P21-201ENST00000452483 NR5A1Q13285 461 aa6.35□□□□□ -1.39
HMGB3P21-201ENST00000452483 ZNF775Q96BV0 537 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P21-201ENST00000452483 DACH1Q9UI36 760 aa6.35□□□□□ -1.39
HMGB3P21-201ENST00000452483 CAPN5O15484 640 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 CLSTN1O94985 981 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 GRM5P41594 1212 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 ZNF787Q6DD87 383 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 CC2D2BQ6DHV5 1058 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 TICAM2Q86XR7 235 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 PBXIP1Q96AQ6 731 aa6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 CDV3Q9UKY7 258 aaKnown RBP6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P21-201ENST00000452483 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
HMGB3P21-201ENST00000452483 TIMP2P16035 220 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms