RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 TCP11L2Q8N4U5 519 aa28.61■■■□□ 2.17
UBE2D4-207ENST00000450743 AXIN2Q9Y2T1 843 aa28.6■■■□□ 2.17
UBE2D4-207ENST00000450743 LTN1O94822 1766 aa28.6■■■□□ 2.17
UBE2D4-207ENST00000450743 CRB1P82279 1406 aa28.6■■■□□ 2.17
UBE2D4-207ENST00000450743 FAM182BQ5T319 152 aa28.58■■■□□ 2.17
UBE2D4-207ENST00000450743 THRAP3Q9Y2W1 955 aaKnown RBP28.58■■■□□ 2.17
UBE2D4-207ENST00000450743 SF3B2Q13435 895 aaKnown RBP28.56■■■□□ 2.16
UBE2D4-207ENST00000450743 PARP4Q9UKK3 1724 aaKnown RBP28.56■■■□□ 2.16
UBE2D4-207ENST00000450743 RGPD1P0DJD0 1748 aa28.55■■■□□ 2.16
UBE2D4-207ENST00000450743 ABCC6O95255 1503 aa28.55■■■□□ 2.16
UBE2D4-207ENST00000450743 WDR17Q8IZU2 1322 aa28.54■■■□□ 2.16
UBE2D4-207ENST00000450743 CDCA8Q53HL2 280 aa28.54■■■□□ 2.16
UBE2D4-207ENST00000450743 TOM1L2Q6ZVM7 507 aa28.54■■■□□ 2.16
UBE2D4-207ENST00000450743 OVOS2A0A0J9YW53 1432 aa28.53■■■□□ 2.16
UBE2D4-207ENST00000450743 OVOS2Q6IE36 1432 aa28.53■■■□□ 2.16
UBE2D4-207ENST00000450743 ANKRD36BQ8N2N9 1353 aa28.53■■■□□ 2.16
UBE2D4-207ENST00000450743 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
UBE2D4-207ENST00000450743 DEFB132Q7Z7B7 95 aa28.52■■■□□ 2.16
UBE2D4-207ENST00000450743 PDE3BQ13370 1112 aa28.5■■■□□ 2.15
UBE2D4-207ENST00000450743 TNS1Q9HBL0 1735 aaKnown RBP28.49■■■□□ 2.15
UBE2D4-207ENST00000450743 MYOM1P52179 1685 aa28.48■■■□□ 2.15
UBE2D4-207ENST00000450743 FAM196AQ6ZSG2 479 aa28.48■■■□□ 2.15
UBE2D4-207ENST00000450743 CSB-PGBD3P0DP91 1061 aa28.47■■■□□ 2.15
UBE2D4-207ENST00000450743 LRRC37A3O60309 1634 aa28.45■■■□□ 2.14
UBE2D4-207ENST00000450743 BAG6P46379 1132 aa28.45■■■□□ 2.14
UBE2D4-207ENST00000450743 COG3Q96JB2 828 aa28.45■■■□□ 2.14
UBE2D4-207ENST00000450743 CARD10Q9BWT7 1032 aa28.45■■■□□ 2.14
UBE2D4-207ENST00000450743 KIF20BQ96Q89 1820 aa28.43■■■□□ 2.14
UBE2D4-207ENST00000450743 CDCA7Q9BWT1 371 aaPredicted RBP28.41■■■□□ 2.14
UBE2D4-207ENST00000450743 ERBB3P21860 1342 aa28.41■■■□□ 2.14
UBE2D4-207ENST00000450743 FYB1O15117 783 aa28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 TRIM37O94972 964 aa28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 EIF4G2P78344 907 aaKnown RBP eCLIP28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 DDB1Q16531 1140 aa28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 SBF2Q86WG5 1849 aa28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 PEAK1Q9H792 1746 aa28.4■■■□□ 2.14
UBE2D4-207ENST00000450743 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
UBE2D4-207ENST00000450743 DISP2A7MBM2 1401 aa28.37■■■□□ 2.13
UBE2D4-207ENST00000450743 HSPA5P11021 654 aaKnown RBP28.37■■■□□ 2.13
UBE2D4-207ENST00000450743 EN1Q05925 392 aaPredicted RBP28.37■■■□□ 2.13
UBE2D4-207ENST00000450743 IP6K1Q92551 441 aa28.37■■■□□ 2.13
UBE2D4-207ENST00000450743 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
UBE2D4-207ENST00000450743 GGNBP2Q9H3C7 697 aa28.36■■■□□ 2.13
UBE2D4-207ENST00000450743 C11orf95C9JLR9 678 aaPredicted RBP28.35■■■□□ 2.13
UBE2D4-207ENST00000450743 FBLN1P23142 703 aa28.35■■■□□ 2.13
UBE2D4-207ENST00000450743 CARD14Q9BXL6 1004 aa28.35■■■□□ 2.13
UBE2D4-207ENST00000450743 NLRP2Q9NX02 1062 aa28.35■■■□□ 2.13
UBE2D4-207ENST00000450743 OVOS2A0A0G2JMS6 1433 aa28.35■■■□□ 2.13
UBE2D4-207ENST00000450743 FAM208AQ9UK61 1670 aaKnown RBP28.34■■■□□ 2.13
UBE2D4-207ENST00000450743 MAP3K19Q56UN5 1328 aa28.34■■■□□ 2.13
UBE2D4-207ENST00000450743 APBA3O96018 575 aa28.31■■■□□ 2.12
UBE2D4-207ENST00000450743 NSD3Q9BZ95 1437 aa28.31■■■□□ 2.12
UBE2D4-207ENST00000450743 RGPD2P0DJD1 1756 aa28.31■■■□□ 2.12
UBE2D4-207ENST00000450743 AMPHP49418 695 aa28.3■■■□□ 2.12
UBE2D4-207ENST00000450743 MARCH10Q8NA82 808 aaPredicted RBP28.3■■■□□ 2.12
UBE2D4-207ENST00000450743 POLR3GLQ9BT43 218 aa28.3■■■□□ 2.12
UBE2D4-207ENST00000450743 EXOC5O00471 708 aa28.29■■■□□ 2.12
UBE2D4-207ENST00000450743 HOXC9P31274 260 aa28.29■■■□□ 2.12
UBE2D4-207ENST00000450743 CAMKK2Q96RR4 588 aa28.29■■■□□ 2.12
UBE2D4-207ENST00000450743 EZH2Q15910 746 aaKnown RBP28.28■■■□□ 2.12
UBE2D4-207ENST00000450743 RRS1Q15050 365 aaKnown RBP28.27■■■□□ 2.12
UBE2D4-207ENST00000450743 LTV1Q96GA3 475 aaPredicted RBP28.27■■■□□ 2.12
UBE2D4-207ENST00000450743 KAT6BQ8WYB5 2073 aa28.27■■■□□ 2.12
UBE2D4-207ENST00000450743 TNS2Q63HR2 1409 aa28.26■■■□□ 2.11
UBE2D4-207ENST00000450743 RTL1A6NKG5 1358 aa28.25■■■□□ 2.11
UBE2D4-207ENST00000450743 IL2RBP14784 551 aa28.25■■■□□ 2.11
UBE2D4-207ENST00000450743 RREB1Q92766 1687 aa28.25■■■□□ 2.11
UBE2D4-207ENST00000450743 BCL9O00512 1426 aa28.25■■■□□ 2.11
UBE2D4-207ENST00000450743 PARD3Q8TEW0 1356 aa28.24■■■□□ 2.11
UBE2D4-207ENST00000450743 MAP2P11137 1827 aaKnown RBP28.22■■■□□ 2.11
UBE2D4-207ENST00000450743 CGNL1Q0VF96 1302 aa28.2■■■□□ 2.11
UBE2D4-207ENST00000450743 RGPD3A6NKT7 1758 aaPredicted RBP28.2■■■□□ 2.11
UBE2D4-207ENST00000450743 RGPD4Q7Z3J3 1758 aa28.2■■■□□ 2.11
UBE2D4-207ENST00000450743 NUP188Q5SRE5 1749 aa28.2■■■□□ 2.1
UBE2D4-207ENST00000450743 ANKRD26Q9UPS8 1709 aa28.2■■■□□ 2.1
UBE2D4-207ENST00000450743 BCL11BQ9C0K0 894 aaPredicted RBP28.19■■■□□ 2.1
UBE2D4-207ENST00000450743 KIF24Q5T7B8 1368 aa28.17■■■□□ 2.1
UBE2D4-207ENST00000450743 PSDA5PKW4 1024 aaPredicted RBP28.17■■■□□ 2.1
UBE2D4-207ENST00000450743 PTF1AQ7RTS3 328 aa28.17■■■□□ 2.1
UBE2D4-207ENST00000450743 INSRP06213 1382 aa28.15■■■□□ 2.1
UBE2D4-207ENST00000450743 FLT4P35916 1363 aa28.15■■■□□ 2.1
UBE2D4-207ENST00000450743 HSP90AB2PQ58FF8 381 aa28.15■■■□□ 2.1
UBE2D4-207ENST00000450743 PANK3Q9H999 370 aa28.15■■■□□ 2.1
UBE2D4-207ENST00000450743 NHSQ6T4R5 1651 aa28.14■■■□□ 2.1
UBE2D4-207ENST00000450743 PLSCR1O15162 318 aa28.14■■■□□ 2.1
UBE2D4-207ENST00000450743 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
UBE2D4-207ENST00000450743 R3HDM1Q15032 1099 aaKnown RBP28.12■■■□□ 2.09
UBE2D4-207ENST00000450743 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
UBE2D4-207ENST00000450743 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
UBE2D4-207ENST00000450743 EMILIN1Q9Y6C2 1016 aa28.12■■■□□ 2.09
UBE2D4-207ENST00000450743 SHANK3Q9BYB0 1731 aa28.11■■■□□ 2.09
UBE2D4-207ENST00000450743 SRCAPQ6ZRS2 3230 aa28.11■■■□□ 2.09
UBE2D4-207ENST00000450743 MEGF6O75095 1541 aa28.08■■■□□ 2.09
UBE2D4-207ENST00000450743 KCNQ2O43526 872 aa28.08■■■□□ 2.09
UBE2D4-207ENST00000450743 BTAF1O14981 1849 aa28.07■■■□□ 2.08
UBE2D4-207ENST00000450743 USHBP1Q8N6Y0 703 aa28.07■■■□□ 2.08
UBE2D4-207ENST00000450743 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
UBE2D4-207ENST00000450743 ACSBG1Q96GR2 724 aa28.07■■■□□ 2.08
UBE2D4-207ENST00000450743 LRP5O75197 1615 aa28.07■■■□□ 2.08
UBE2D4-207ENST00000450743 PPM1GO15355 546 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms