RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 RGPD1P0DJD0 1748 aa22.48■■□□□ 1.19
SGCE-208ENST00000450385 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
SGCE-208ENST00000450385 USP47Q96K76 1375 aa22.48■■□□□ 1.19
SGCE-208ENST00000450385 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
SGCE-208ENST00000450385 WDR17Q8IZU2 1322 aa22.47■■□□□ 1.19
SGCE-208ENST00000450385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.197e-6■■□□□ 11.5
SGCE-208ENST00000450385 NFAT5O94916 1531 aa22.46■■□□□ 1.19
SGCE-208ENST00000450385 PARP4Q9UKK3 1724 aaKnown RBP22.45■■□□□ 1.19
SGCE-208ENST00000450385 A0A1W2PP64 1363 aa22.45■■□□□ 1.18
SGCE-208ENST00000450385 DISP2A7MBM2 1401 aa22.44■■□□□ 1.18
SGCE-208ENST00000450385 TOM1L2Q6ZVM7 507 aa22.44■■□□□ 1.18
SGCE-208ENST00000450385 CARD10Q9BWT7 1032 aa22.44■■□□□ 1.18
SGCE-208ENST00000450385 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
SGCE-208ENST00000450385 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
SGCE-208ENST00000450385 RGPD5Q99666 1765 aa22.42■■□□□ 1.18
SGCE-208ENST00000450385 ANKRD36BQ8N2N9 1353 aa22.41■■□□□ 1.18
SGCE-208ENST00000450385 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
SGCE-208ENST00000450385 NME9Q86XW9 330 aa22.41■■□□□ 1.18
SGCE-208ENST00000450385 PARD3Q8TEW0 1356 aa22.39■■□□□ 1.18
SGCE-208ENST00000450385 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
SGCE-208ENST00000450385 SRCAPQ6ZRS2 3230 aa22.39■■□□□ 1.17
SGCE-208ENST00000450385 DDB1Q16531 1140 aa22.38■■□□□ 1.17
SGCE-208ENST00000450385 OVOS2A0A0J9YW53 1432 aa22.38■■□□□ 1.17
SGCE-208ENST00000450385 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
SGCE-208ENST00000450385 CSB-PGBD3P0DP91 1061 aa22.37■■□□□ 1.17
SGCE-208ENST00000450385 COG3Q96JB2 828 aa22.37■■□□□ 1.17
SGCE-208ENST00000450385 LTN1O94822 1766 aa22.37■■□□□ 1.17
SGCE-208ENST00000450385 SOX12O15370 315 aa22.36■■□□□ 1.17
SGCE-208ENST00000450385 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
SGCE-208ENST00000450385 TNS1Q9HBL0 1735 aaKnown RBP22.36■■□□□ 1.17
SGCE-208ENST00000450385 BCL9O00512 1426 aa22.35■■□□□ 1.17
SGCE-208ENST00000450385 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
SGCE-208ENST00000450385 WNK3Q9BYP7 1800 aa22.34■■□□□ 1.17
SGCE-208ENST00000450385 TRIM37O94972 964 aa22.34■■□□□ 1.17
SGCE-208ENST00000450385 ERBB3P21860 1342 aa22.33■■□□□ 1.17
SGCE-208ENST00000450385 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.17
SGCE-208ENST00000450385 IP6K1Q92551 441 aa22.33■■□□□ 1.17
SGCE-208ENST00000450385 EXOC5O00471 708 aa22.32■■□□□ 1.16
SGCE-208ENST00000450385 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
SGCE-208ENST00000450385 APBA3O96018 575 aa22.31■■□□□ 1.16
SGCE-208ENST00000450385 CAMKK2Q96RR4 588 aa22.31■■□□□ 1.16
SGCE-208ENST00000450385 PEAK1Q9H792 1746 aa22.29■■□□□ 1.16
SGCE-208ENST00000450385 LRRC37A3O60309 1634 aa22.29■■□□□ 1.16
SGCE-208ENST00000450385 FYB1O15117 783 aa22.29■■□□□ 1.16
SGCE-208ENST00000450385 FAM208AQ9UK61 1670 aaKnown RBP22.29■■□□□ 1.16
SGCE-208ENST00000450385 SBF2Q86WG5 1849 aa22.29■■□□□ 1.16
SGCE-208ENST00000450385 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
SGCE-208ENST00000450385 PLSCR1O15162 318 aa22.27■■□□□ 1.16
SGCE-208ENST00000450385 EIF4G2P78344 907 aaKnown RBP eCLIP22.27■■□□□ 1.16
SGCE-208ENST00000450385 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
SGCE-208ENST00000450385 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
SGCE-208ENST00000450385 KIF24Q5T7B8 1368 aa22.25■■□□□ 1.15
SGCE-208ENST00000450385 IL2RBP14784 551 aa22.25■■□□□ 1.15
SGCE-208ENST00000450385 RGPD3A6NKT7 1758 aaPredicted RBP22.25■■□□□ 1.15
SGCE-208ENST00000450385 RGPD4Q7Z3J3 1758 aa22.25■■□□□ 1.15
SGCE-208ENST00000450385 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
SGCE-208ENST00000450385 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
SGCE-208ENST00000450385 MARCH10Q8NA82 808 aaPredicted RBP22.24■■□□□ 1.15
SGCE-208ENST00000450385 AMPHP49418 695 aa22.23■■□□□ 1.15
SGCE-208ENST00000450385 MAP3K19Q56UN5 1328 aa22.23■■□□□ 1.15
SGCE-208ENST00000450385 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
SGCE-208ENST00000450385 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
SGCE-208ENST00000450385 KIF20BQ96Q89 1820 aa22.22■■□□□ 1.15
SGCE-208ENST00000450385 HOXC9P31274 260 aa22.21■■□□□ 1.15
SGCE-208ENST00000450385 MYOM1P52179 1685 aa22.2■■□□□ 1.15
SGCE-208ENST00000450385 RREB1Q92766 1687 aa22.2■■□□□ 1.15
SGCE-208ENST00000450385 GGNBP2Q9H3C7 697 aa22.19■■□□□ 1.14
SGCE-208ENST00000450385 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
SGCE-208ENST00000450385 CARD14Q9BXL6 1004 aa22.18■■□□□ 1.14
SGCE-208ENST00000450385 LRP5O75197 1615 aa22.17■■□□□ 1.14
SGCE-208ENST00000450385 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
SGCE-208ENST00000450385 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
SGCE-208ENST00000450385 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.14
SGCE-208ENST00000450385 INSRP06213 1382 aa22.14■■□□□ 1.14
SGCE-208ENST00000450385 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.13
SGCE-208ENST00000450385 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.13
SGCE-208ENST00000450385 FLT4P35916 1363 aa22.13■■□□□ 1.13
SGCE-208ENST00000450385 R3HDM1Q15032 1099 aaKnown RBP22.13■■□□□ 1.13
SGCE-208ENST00000450385 RRS1Q15050 365 aaKnown RBP22.12■■□□□ 1.13
SGCE-208ENST00000450385 LTV1Q96GA3 475 aaPredicted RBP22.12■■□□□ 1.13
SGCE-208ENST00000450385 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
SGCE-208ENST00000450385 FBLN1P23142 703 aa22.1■■□□□ 1.13
SGCE-208ENST00000450385 NHSQ6T4R5 1651 aa22.1■■□□□ 1.13
SGCE-208ENST00000450385 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.13
SGCE-208ENST00000450385 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
SGCE-208ENST00000450385 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
SGCE-208ENST00000450385 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
SGCE-208ENST00000450385 NBPF6Q5VWK0 638 aa22.06■■□□□ 1.12
SGCE-208ENST00000450385 RAPGEF4Q8WZA2 1011 aa22.06■■□□□ 1.12
SGCE-208ENST00000450385 NBPF4Q96M43 638 aa22.06■■□□□ 1.12
SGCE-208ENST00000450385 NSD2O96028 1365 aa22.06■■□□□ 1.12
SGCE-208ENST00000450385 HMGB2P26583 209 aaKnown RBP22.05■■□□□ 1.12
SGCE-208ENST00000450385 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
SGCE-208ENST00000450385 PROM2Q8N271 834 aa22.05■■□□□ 1.12
SGCE-208ENST00000450385 ANKRD26Q9UPS8 1709 aa22.05■■□□□ 1.12
SGCE-208ENST00000450385 KCNQ2O43526 872 aa22.04■■□□□ 1.12
SGCE-208ENST00000450385 TXNRD1Q16881 649 aa22.04■■□□□ 1.12
SGCE-208ENST00000450385 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
SGCE-208ENST00000450385 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
SGCE-208ENST00000450385 PANK3Q9H999 370 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms