RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FAM187AA6NFU0 413 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 DGAT1O75907 488 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 SEMA3FQ13275 785 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 NR6A1Q15406 480 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 TBC1D9Q6ZT07 1266 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRDM9Q9NQV7 894 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 IVNS1ABPQ9Y6Y0 642 aa5.01□□□□□ -1.61
HMGB3P8-201ENST00000449709 POTECB2RU33 542 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 PER1O15534 1290 aaPredicted RBP5□□□□□ -1.61
HMGB3P8-201ENST00000449709 RBM25P49756 843 aaKnown RBP5□□□□□ -1.61
HMGB3P8-201ENST00000449709 FOXC1Q12948 553 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 GLIPR1L2Q4G1C9 344 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 CDCA8Q53HL2 280 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 TAF7LQ5H9L4 462 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 SYMPKQ92797 1274 aaKnown RBP5□□□□□ -1.61
HMGB3P8-201ENST00000449709 PKD2L1Q9P0L9 805 aa5□□□□□ -1.61
HMGB3P8-201ENST00000449709 FCF1Q9Y324 198 aaKnown RBP5□□□□□ -1.61
HMGB3P8-201ENST00000449709 ATP9BO43861 1147 aa4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 FMNL1O95466 1100 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 EIF4G2P78344 907 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 KANK4Q5T7N3 995 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 BRICD5Q6PL45 260 aa4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 RNF19BQ6ZMZ0 732 aa4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 SND1Q7KZF4 910 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 PNMA1Q8ND90 353 aa4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 ZNF775Q96BV0 537 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 AMOTL2Q9Y2J4 779 aa4.99□□□□□ -1.61
HMGB3P8-201ENST00000449709 ST8SIA5O15466 376 aa4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 ELOAQ14241 798 aaKnown RBP4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 CCDC27Q2M243 656 aa4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 DESI1Q6ICB0 168 aa4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 RETREG3Q86VR2 466 aa4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 GNEQ9Y223 722 aaKnown RBP4.98□□□□□ -1.61
HMGB3P8-201ENST00000449709 RPIAP49247 311 aa4.97□□□□□ -1.61
HMGB3P8-201ENST00000449709 NR1H3Q13133 447 aa4.97□□□□□ -1.61
HMGB3P8-201ENST00000449709 LYPD8Q6UX82 237 aa4.97□□□□□ -1.61
HMGB3P8-201ENST00000449709 E9PSI1 815 aa4.96□□□□□ -1.62
HMGB3P8-201ENST00000449709 CD2BP2O95400 341 aaKnown RBP4.96□□□□□ -1.62
HMGB3P8-201ENST00000449709 MSS51Q4VC12 460 aa4.96□□□□□ -1.62
HMGB3P8-201ENST00000449709 ZBBXA8MT70 800 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 PIK3CDO00329 1044 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 FBXO45P0C2W1 286 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 RBM10P98175 930 aaKnown RBP4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 TMEM164Q5U3C3 297 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 B4GALNT3Q6L9W6 998 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 TXNDC2Q86VQ3 553 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 NFATC2IPQ8NCF5 419 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 AAASQ9NRG9 546 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 TOR4AQ9NXH8 423 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 ZMIZ1Q9ULJ6 1067 aa4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 CENPJQ9HC77 1338 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P8-201ENST00000449709 Q3C1V9 767 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 PHLDB3Q6NSJ2 640 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 PLEKHM2Q8IWE5 1019 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 CYP4X1Q8N118 509 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 STK32AQ8WU08 396 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 DACH1Q9UI36 760 aa4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 WRNQ14191 1432 aaPredicted RBP eCLIP4.94□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L3A6NCW0 530 aa4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L4A6NCW7 530 aa4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 ZBTB24O43167 697 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 F12P00748 615 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L2Q6R6M4 530 aa4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L1Q7RTZ2 530 aa4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 FKBPLQ9UIM3 349 aa4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 NOVA2Q9UNW9 492 aaKnown RBP4.93□□□□□ -1.62
HMGB3P8-201ENST00000449709 LOC105371045A0A1W2PR82 267 aa4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 SKIP12755 728 aa4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 MMP16P51512 607 aa4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 CCER1Q8TC90 406 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 YTHDC1Q96MU7 727 aaKnown RBP4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 USB1Q9BQ65 265 aaKnown RBP4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP35Q9P2H5 1018 aa4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 ZC3H4Q9UPT8 1303 aaKnown RBP4.92□□□□□ -1.62
HMGB3P8-201ENST00000449709 TTC24A2A3L6 582 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 FAM196BA6NMK8 535 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L5A8MUK1 530 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 WNT7AO00755 349 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 DXOO77932 396 aaKnown RBP4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 AVPP01185 164 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 SSFA2P28290 1259 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 TRIM32Q13049 653 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 CCDC24Q8N4L8 307 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 FAM174AQ8TBP5 190 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 SLAIN2Q9P270 581 aa4.91□□□□□ -1.62
HMGB3P8-201ENST00000449709 USP17L15C9J2P7 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L10C9JJH3 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L13C9JLJ4 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L12C9JPN9 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L11C9JVI0 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L21D6R901 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L18D6R9N7 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L22D6RA61 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L17D6RBQ6 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L19D6RCP7 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 USP17L20D6RJB6 530 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 AXIN1O15169 862 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 IGSF3O75054 1194 aa4.9□□□□□ -1.63
HMGB3P8-201ENST00000449709 ARID4AP29374 1257 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms