RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 GOLGA6L1Q8N7Z2 621 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 HOOK1Q9UJC3 728 aaKnown RBP12.49□□□□□ -0.41
CTC1-202ENST00000449476 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 SIL1Q9H173 461 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 EMILIN1Q9Y6C2 1016 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 MAP4K4O95819 1239 aaPredicted RBP12.48□□□□□ -0.41
CTC1-202ENST00000449476 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
CTC1-202ENST00000449476 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
CTC1-202ENST00000449476 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
CTC1-202ENST00000449476 NOS1P29475 1434 aa12.48□□□□□ -0.41
CTC1-202ENST00000449476 TRIM27P14373 513 aa12.48□□□□□ -0.41
CTC1-202ENST00000449476 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
CTC1-202ENST00000449476 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
CTC1-202ENST00000449476 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
CTC1-202ENST00000449476 FBXO31Q5XUX0 539 aaPredicted RBP12.47□□□□□ -0.41
CTC1-202ENST00000449476 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
CTC1-202ENST00000449476 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
CTC1-202ENST00000449476 ANKRD20A12PQ8NF67 263 aa12.46□□□□□ -0.41
CTC1-202ENST00000449476 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.41
CTC1-202ENST00000449476 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.42
CTC1-202ENST00000449476 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.42
CTC1-202ENST00000449476 MYL6BP14649 208 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 TPM2P07951 284 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 DHX29Q7Z478 1369 aaKnown RBP12.45□□□□□ -0.42
CTC1-202ENST00000449476 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
CTC1-202ENST00000449476 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 TRIM5Q9C035 493 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
CTC1-202ENST00000449476 ATP10BO94823 1461 aa12.44□□□□□ -0.42
CTC1-202ENST00000449476 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 KINO60870 393 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 AACSQ86V21 672 aa12.44□□□□□ -0.42
CTC1-202ENST00000449476 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 IPO7O95373 1038 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 CABP4P57796 275 aa12.44□□□□□ -0.42
CTC1-202ENST00000449476 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 NAT10Q9H0A0 1025 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
CTC1-202ENST00000449476 IGHDP01880 384 aa12.44□□□□□ -0.42
CTC1-202ENST00000449476 CWC27Q6UX04 472 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
CTC1-202ENST00000449476 RAD21O60216 631 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
CTC1-202ENST00000449476 FANCAO15360 1455 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 STK3Q13188 491 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
CTC1-202ENST00000449476 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 NSD2O96028 1365 aa12.43□□□□□ -0.42
CTC1-202ENST00000449476 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
CTC1-202ENST00000449476 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CTC1-202ENST00000449476 BLOC1S2Q6QNY1 142 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 PCMTD1Q96MG8 357 aaPredicted RBP12.42□□□□□ -0.42
CTC1-202ENST00000449476 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 FYB1O15117 783 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 KDM4AO75164 1064 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 CCDC158Q5M9N0 1113 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
CTC1-202ENST00000449476 KIF6Q6ZMV9 814 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 RAPGEF6Q8TEU7 1601 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 F6X3S4 739 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 MX1P20591 662 aa12.42□□□□□ -0.42
CTC1-202ENST00000449476 KRT85P78386 507 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 ATP2B1P20020 1258 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
CTC1-202ENST00000449476 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
CTC1-202ENST00000449476 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 XBP1P17861 261 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 STK38Q15208 465 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
CTC1-202ENST00000449476 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
CTC1-202ENST00000449476 TESK2Q96S53 571 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 PDE4CQ08493 712 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.42
CTC1-202ENST00000449476 CEP89Q96ST8 783 aa12.4□□□□□ -0.42
CTC1-202ENST00000449476 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
CTC1-202ENST00000449476 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
CTC1-202ENST00000449476 CCDC192P0DO97 292 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms