RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 THRAP3Q9Y2W1 955 aaKnown RBP19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 OVOS2A0A0J9YW53 1432 aa19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 OVOS2Q6IE36 1432 aa19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 FYB1O15117 783 aa19.65■□□□□ 0.74
RTFDC1-204ENST00000449062 USP54Q70EL1 1684 aa19.65■□□□□ 0.74
RTFDC1-204ENST00000449062 THSD7AQ9UPZ6 1657 aa19.65■□□□□ 0.74
RTFDC1-204ENST00000449062 WDR17Q8IZU2 1322 aa19.64■□□□□ 0.73
RTFDC1-204ENST00000449062 CRB1P82279 1406 aa19.63■□□□□ 0.73
RTFDC1-204ENST00000449062 A0A0G2JS52 829 aa19.63■□□□□ 0.73
RTFDC1-204ENST00000449062 MYT1Q01538 1121 aa19.63■□□□□ 0.73
RTFDC1-204ENST00000449062 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
RTFDC1-204ENST00000449062 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
RTFDC1-204ENST00000449062 FBLN1P23142 703 aa19.61■□□□□ 0.73
RTFDC1-204ENST00000449062 CARD10Q9BWT7 1032 aa19.61■□□□□ 0.73
RTFDC1-204ENST00000449062 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
RTFDC1-204ENST00000449062 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
RTFDC1-204ENST00000449062 COG3Q96JB2 828 aa19.6■□□□□ 0.73
RTFDC1-204ENST00000449062 IP6K1Q92551 441 aa19.58■□□□□ 0.72
RTFDC1-204ENST00000449062 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
RTFDC1-204ENST00000449062 ABCC6O95255 1503 aa19.57■□□□□ 0.72
RTFDC1-204ENST00000449062 ERBB3P21860 1342 aa19.56■□□□□ 0.72
RTFDC1-204ENST00000449062 FAM196AQ6ZSG2 479 aa19.56■□□□□ 0.72
RTFDC1-204ENST00000449062 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
RTFDC1-204ENST00000449062 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
RTFDC1-204ENST00000449062 PDE3BQ13370 1112 aa19.55■□□□□ 0.72
RTFDC1-204ENST00000449062 CSB-PGBD3P0DP91 1061 aa19.54■□□□□ 0.72
RTFDC1-204ENST00000449062 CDCA7Q9BWT1 371 aaPredicted RBP19.54■□□□□ 0.72
RTFDC1-204ENST00000449062 DISP2A7MBM2 1401 aa19.53■□□□□ 0.72
RTFDC1-204ENST00000449062 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
RTFDC1-204ENST00000449062 ANKRD24Q8TF21 1146 aa19.53■□□□□ 0.72
RTFDC1-204ENST00000449062 MYOM1P52179 1685 aa19.52■□□□□ 0.72
RTFDC1-204ENST00000449062 HOXC9P31274 260 aa19.51■□□□□ 0.71
RTFDC1-204ENST00000449062 DDB1Q16531 1140 aa19.51■□□□□ 0.71
RTFDC1-204ENST00000449062 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
RTFDC1-204ENST00000449062 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
RTFDC1-204ENST00000449062 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
RTFDC1-204ENST00000449062 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
RTFDC1-204ENST00000449062 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
RTFDC1-204ENST00000449062 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
RTFDC1-204ENST00000449062 TRIM37O94972 964 aa19.49■□□□□ 0.71
RTFDC1-204ENST00000449062 PANK3Q9H999 370 aa19.49■□□□□ 0.71
RTFDC1-204ENST00000449062 PARP4Q9UKK3 1724 aaKnown RBP19.48■□□□□ 0.71
RTFDC1-204ENST00000449062 AMPHP49418 695 aa19.48■□□□□ 0.71
RTFDC1-204ENST00000449062 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
RTFDC1-204ENST00000449062 EXOC5O00471 708 aa19.47■□□□□ 0.71
RTFDC1-204ENST00000449062 CAMKK2Q96RR4 588 aa19.47■□□□□ 0.71
RTFDC1-204ENST00000449062 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
RTFDC1-204ENST00000449062 LTN1O94822 1766 aa19.47■□□□□ 0.71
RTFDC1-204ENST00000449062 BAG6P46379 1132 aa19.46■□□□□ 0.71
RTFDC1-204ENST00000449062 EN1Q05925 392 aaPredicted RBP19.46■□□□□ 0.71
RTFDC1-204ENST00000449062 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
RTFDC1-204ENST00000449062 LTV1Q96GA3 475 aaPredicted RBP19.45■□□□□ 0.7
RTFDC1-204ENST00000449062 BCL9O00512 1426 aa19.44■□□□□ 0.7
RTFDC1-204ENST00000449062 IL2RBP14784 551 aa19.44■□□□□ 0.7
RTFDC1-204ENST00000449062 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
RTFDC1-204ENST00000449062 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
RTFDC1-204ENST00000449062 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
RTFDC1-204ENST00000449062 KIF7Q2M1P5 1343 aa19.43■□□□□ 0.7
RTFDC1-204ENST00000449062 KIF24Q5T7B8 1368 aa19.43■□□□□ 0.7
RTFDC1-204ENST00000449062 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 APBA3O96018 575 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 NBPF6Q5VWK0 638 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 NBPF4Q96M43 638 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 INSRP06213 1382 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
RTFDC1-204ENST00000449062 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
RTFDC1-204ENST00000449062 EZH2Q15910 746 aaKnown RBP19.41■□□□□ 0.7
RTFDC1-204ENST00000449062 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
RTFDC1-204ENST00000449062 BCL11BQ9C0K0 894 aaPredicted RBP19.39■□□□□ 0.69
RTFDC1-204ENST00000449062 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
RTFDC1-204ENST00000449062 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
RTFDC1-204ENST00000449062 FLT4P35916 1363 aa19.38■□□□□ 0.69
RTFDC1-204ENST00000449062 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
RTFDC1-204ENST00000449062 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
RTFDC1-204ENST00000449062 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
RTFDC1-204ENST00000449062 TNS2Q63HR2 1409 aa19.37■□□□□ 0.69
RTFDC1-204ENST00000449062 WNK3Q9BYP7 1800 aa19.37■□□□□ 0.69
RTFDC1-204ENST00000449062 PLSCR1O15162 318 aa19.36■□□□□ 0.69
RTFDC1-204ENST00000449062 PARD3Q8TEW0 1356 aa19.35■□□□□ 0.69
RTFDC1-204ENST00000449062 KCNQ2O43526 872 aa19.35■□□□□ 0.69
RTFDC1-204ENST00000449062 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
RTFDC1-204ENST00000449062 PROM2Q8N271 834 aa19.34■□□□□ 0.69
RTFDC1-204ENST00000449062 USHBP1Q8N6Y0 703 aa19.33■□□□□ 0.68
RTFDC1-204ENST00000449062 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.68
RTFDC1-204ENST00000449062 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.68
RTFDC1-204ENST00000449062 NSD2O96028 1365 aa19.32■□□□□ 0.68
RTFDC1-204ENST00000449062 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
RTFDC1-204ENST00000449062 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
RTFDC1-204ENST00000449062 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
RTFDC1-204ENST00000449062 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
RTFDC1-204ENST00000449062 MEGF6O75095 1541 aa19.3■□□□□ 0.68
RTFDC1-204ENST00000449062 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
RTFDC1-204ENST00000449062 EYA1Q99502 592 aa19.3■□□□□ 0.68
RTFDC1-204ENST00000449062 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
RTFDC1-204ENST00000449062 RGPD2P0DJD1 1756 aa19.29■□□□□ 0.68
RTFDC1-204ENST00000449062 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
RTFDC1-204ENST00000449062 MAP2P11137 1827 aaKnown RBP19.28■□□□□ 0.68
RTFDC1-204ENST00000449062 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms