RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MCM10Q7L590 875 aa18.9■□□□□ 0.62
SF1-211ENST00000448404 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
SF1-211ENST00000448404 FOXO3O43524 673 aa18.89■□□□□ 0.62
SF1-211ENST00000448404 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
SF1-211ENST00000448404 USP19O94966 1318 aa18.87■□□□□ 0.61
SF1-211ENST00000448404 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
SF1-211ENST00000448404 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
SF1-211ENST00000448404 VAMP4O75379 141 aa18.86■□□□□ 0.61
SF1-211ENST00000448404 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
SF1-211ENST00000448404 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
SF1-211ENST00000448404 RWDD1Q9H446 243 aaPredicted RBP18.85■□□□□ 0.61
SF1-211ENST00000448404 KCNA6P17658 529 aa18.84■□□□□ 0.61
SF1-211ENST00000448404 LTV1Q96GA3 475 aaPredicted RBP18.83■□□□□ 0.61
SF1-211ENST00000448404 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
SF1-211ENST00000448404 CDC42BPGQ6DT37 1551 aa18.83■□□□□ 0.6
SF1-211ENST00000448404 TWISTNBQ3B726 338 aaPredicted RBP18.82■□□□□ 0.6
SF1-211ENST00000448404 IL16Q14005 1332 aa18.82■□□□□ 0.6
SF1-211ENST00000448404 LNPKQ9C0E8 428 aa18.82■□□□□ 0.6
SF1-211ENST00000448404 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
SF1-211ENST00000448404 TECPR2O15040 1411 aa18.82■□□□□ 0.6
SF1-211ENST00000448404 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
SF1-211ENST00000448404 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
SF1-211ENST00000448404 RTL5Q5HYW3 569 aaPredicted RBP18.81■□□□□ 0.6
SF1-211ENST00000448404 SPRYD3Q8NCJ5 442 aa18.81■□□□□ 0.6
SF1-211ENST00000448404 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
SF1-211ENST00000448404 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
SF1-211ENST00000448404 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
SF1-211ENST00000448404 MAP3K19Q56UN5 1328 aa18.8■□□□□ 0.6
SF1-211ENST00000448404 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
SF1-211ENST00000448404 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
SF1-211ENST00000448404 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
SF1-211ENST00000448404 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
SF1-211ENST00000448404 GNAI1P63096 354 aa18.78■□□□□ 0.6
SF1-211ENST00000448404 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
SF1-211ENST00000448404 USP6P35125 1406 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
SF1-211ENST00000448404 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 NLRP6P59044 892 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 KIF16BQ96L93 1317 aa18.77■□□□□ 0.6
SF1-211ENST00000448404 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
SF1-211ENST00000448404 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
SF1-211ENST00000448404 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
SF1-211ENST00000448404 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
SF1-211ENST00000448404 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
SF1-211ENST00000448404 MFAP1P55081 439 aaKnown RBP18.76■□□□□ 0.59
SF1-211ENST00000448404 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
SF1-211ENST00000448404 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
SF1-211ENST00000448404 AMPHP49418 695 aa18.75■□□□□ 0.59
SF1-211ENST00000448404 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
SF1-211ENST00000448404 C3P01024 1663 aa18.74■□□□□ 0.59
SF1-211ENST00000448404 APBB1O00213 710 aa18.74■□□□□ 0.59
SF1-211ENST00000448404 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
SF1-211ENST00000448404 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
SF1-211ENST00000448404 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
SF1-211ENST00000448404 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
SF1-211ENST00000448404 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
SF1-211ENST00000448404 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
SF1-211ENST00000448404 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
SF1-211ENST00000448404 ANKRD45Q5TZF3 282 aa18.72■□□□□ 0.59
SF1-211ENST00000448404 EYA1Q99502 592 aa18.72■□□□□ 0.59
SF1-211ENST00000448404 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
SF1-211ENST00000448404 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
SF1-211ENST00000448404 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
SF1-211ENST00000448404 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
SF1-211ENST00000448404 PEAK1Q9H792 1746 aa18.71■□□□□ 0.59
SF1-211ENST00000448404 HDAC1Q13547 482 aaPredicted RBP18.71■□□□□ 0.59
SF1-211ENST00000448404 ITSN1Q15811 1721 aa18.71■□□□□ 0.59
SF1-211ENST00000448404 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
SF1-211ENST00000448404 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
SF1-211ENST00000448404 F6X3S4 739 aa18.7■□□□□ 0.58
SF1-211ENST00000448404 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
SF1-211ENST00000448404 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
SF1-211ENST00000448404 AKAP12Q02952 1782 aa18.69■□□□□ 0.58
SF1-211ENST00000448404 KNDC1Q76NI1 1749 aa18.69■□□□□ 0.58
SF1-211ENST00000448404 G2E3Q7L622 706 aa18.69■□□□□ 0.58
SF1-211ENST00000448404 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
SF1-211ENST00000448404 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
SF1-211ENST00000448404 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
SF1-211ENST00000448404 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
SF1-211ENST00000448404 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
SF1-211ENST00000448404 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
SF1-211ENST00000448404 LMOD2Q6P5Q4 547 aa18.65■□□□□ 0.58
SF1-211ENST00000448404 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
SF1-211ENST00000448404 CHL1O00533 1208 aa18.65■□□□□ 0.58
SF1-211ENST00000448404 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
SF1-211ENST00000448404 NUCB1Q02818 461 aa18.65■□□□□ 0.58
SF1-211ENST00000448404 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
SF1-211ENST00000448404 AAMPQ13685 434 aa18.64■□□□□ 0.58
SF1-211ENST00000448404 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.58
SF1-211ENST00000448404 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
SF1-211ENST00000448404 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
SF1-211ENST00000448404 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
SF1-211ENST00000448404 DIP2AQ14689 1571 aa18.64■□□□□ 0.57
SF1-211ENST00000448404 ABCC4O15439 1325 aa18.64■□□□□ 0.57
SF1-211ENST00000448404 MEIS3Q99687 375 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms