RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
LTBR-204ENST00000444814 SOCS7O14512 581 aa16.8■□□□□ 0.28
LTBR-204ENST00000444814 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
LTBR-204ENST00000444814 A0A0G2JS52 829 aa16.79■□□□□ 0.28
LTBR-204ENST00000444814 FYB1O15117 783 aa16.79■□□□□ 0.28
LTBR-204ENST00000444814 PANK3Q9H999 370 aa16.79■□□□□ 0.28
LTBR-204ENST00000444814 NSD2O96028 1365 aa16.78■□□□□ 0.28
LTBR-204ENST00000444814 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
LTBR-204ENST00000444814 MYOM1P52179 1685 aa16.78■□□□□ 0.28
LTBR-204ENST00000444814 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.28
LTBR-204ENST00000444814 THRAP3Q9Y2W1 955 aaKnown RBP16.77■□□□□ 0.28
LTBR-204ENST00000444814 SPATA31A5Q5VU36 1347 aa16.77■□□□□ 0.28
LTBR-204ENST00000444814 SPATA31A7Q8IWB4 1347 aa16.77■□□□□ 0.28
LTBR-204ENST00000444814 AMPHP49418 695 aa16.77■□□□□ 0.27
LTBR-204ENST00000444814 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.27
LTBR-204ENST00000444814 NFAT5O94916 1531 aa16.76■□□□□ 0.27
LTBR-204ENST00000444814 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
LTBR-204ENST00000444814 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
LTBR-204ENST00000444814 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
LTBR-204ENST00000444814 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
LTBR-204ENST00000444814 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
LTBR-204ENST00000444814 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
LTBR-204ENST00000444814 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
LTBR-204ENST00000444814 SPATA31A1Q5TZJ5 1347 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 WDR17Q8IZU2 1322 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 RGS12O14924 1447 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 CRB1P82279 1406 aa16.74■□□□□ 0.27
LTBR-204ENST00000444814 COL5A2P05997 1499 aaPredicted RBP16.74■□□□□ 0.27
LTBR-204ENST00000444814 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
LTBR-204ENST00000444814 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
LTBR-204ENST00000444814 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
LTBR-204ENST00000444814 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
LTBR-204ENST00000444814 ONECUT3O60422 494 aaPredicted RBP16.72■□□□□ 0.27
LTBR-204ENST00000444814 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
LTBR-204ENST00000444814 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
LTBR-204ENST00000444814 IP6K1Q92551 441 aa16.72■□□□□ 0.27
LTBR-204ENST00000444814 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
LTBR-204ENST00000444814 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
LTBR-204ENST00000444814 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
LTBR-204ENST00000444814 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
LTBR-204ENST00000444814 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
LTBR-204ENST00000444814 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
LTBR-204ENST00000444814 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
LTBR-204ENST00000444814 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
LTBR-204ENST00000444814 GLI3P10071 1580 aa16.7■□□□□ 0.26
LTBR-204ENST00000444814 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
LTBR-204ENST00000444814 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
LTBR-204ENST00000444814 ERBB3P21860 1342 aa16.69■□□□□ 0.26
LTBR-204ENST00000444814 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 FLT4P35916 1363 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 HOXC9P31274 260 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
LTBR-204ENST00000444814 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
LTBR-204ENST00000444814 CCDC125Q86Z20 511 aa16.66■□□□□ 0.26
LTBR-204ENST00000444814 ARXQ96QS3 562 aa16.66■□□□□ 0.26
LTBR-204ENST00000444814 LTN1O94822 1766 aa16.66■□□□□ 0.26
LTBR-204ENST00000444814 COL18A1P39060 1754 aa16.65■□□□□ 0.26
LTBR-204ENST00000444814 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
LTBR-204ENST00000444814 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
LTBR-204ENST00000444814 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
LTBR-204ENST00000444814 INSRP06213 1382 aa16.64■□□□□ 0.25
LTBR-204ENST00000444814 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
LTBR-204ENST00000444814 DDB1Q16531 1140 aa16.63■□□□□ 0.25
LTBR-204ENST00000444814 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
LTBR-204ENST00000444814 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
LTBR-204ENST00000444814 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
LTBR-204ENST00000444814 IL2RBP14784 551 aa16.61■□□□□ 0.25
LTBR-204ENST00000444814 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
LTBR-204ENST00000444814 EXOC5O00471 708 aa16.6■□□□□ 0.25
LTBR-204ENST00000444814 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
LTBR-204ENST00000444814 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
LTBR-204ENST00000444814 POLKQ9UBT6 870 aa16.6■□□□□ 0.25
LTBR-204ENST00000444814 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
LTBR-204ENST00000444814 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
LTBR-204ENST00000444814 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
LTBR-204ENST00000444814 FBLN1P23142 703 aa16.58■□□□□ 0.24
LTBR-204ENST00000444814 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
LTBR-204ENST00000444814 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
LTBR-204ENST00000444814 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
LTBR-204ENST00000444814 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
LTBR-204ENST00000444814 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
LTBR-204ENST00000444814 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
LTBR-204ENST00000444814 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
LTBR-204ENST00000444814 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
LTBR-204ENST00000444814 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
LTBR-204ENST00000444814 BAG6P46379 1132 aa16.52■□□□□ 0.24
LTBR-204ENST00000444814 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
LTBR-204ENST00000444814 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
LTBR-204ENST00000444814 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
LTBR-204ENST00000444814 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
LTBR-204ENST00000444814 BRWD3Q6RI45 1802 aa16.51■□□□□ 0.23
LTBR-204ENST00000444814 MTHFSP49914 203 aa16.51■□□□□ 0.23
LTBR-204ENST00000444814 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
LTBR-204ENST00000444814 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms