RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 LRRC37A3O60309 1634 aa19.69■□□□□ 0.74
PTPRE-203ENST00000442830 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
PTPRE-203ENST00000442830 WDR17Q8IZU2 1322 aa19.68■□□□□ 0.74
PTPRE-203ENST00000442830 MON2Q7Z3U7 1717 aa19.68■□□□□ 0.74
PTPRE-203ENST00000442830 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
PTPRE-203ENST00000442830 TOM1L2Q6ZVM7 507 aa19.67■□□□□ 0.74
PTPRE-203ENST00000442830 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
PTPRE-203ENST00000442830 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
PTPRE-203ENST00000442830 ZBTB7CA1YPR0 619 aa19.66■□□□□ 0.74
PTPRE-203ENST00000442830 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
PTPRE-203ENST00000442830 DDB1Q16531 1140 aa19.66■□□□□ 0.74
PTPRE-203ENST00000442830 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
PTPRE-203ENST00000442830 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
PTPRE-203ENST00000442830 BCL9O00512 1426 aa19.65■□□□□ 0.74
PTPRE-203ENST00000442830 ARHGEF25Q86VW2 580 aa19.64■□□□□ 0.73
PTPRE-203ENST00000442830 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
PTPRE-203ENST00000442830 NFAT5O94916 1531 aa19.62■□□□□ 0.73
PTPRE-203ENST00000442830 CCDC7Q96M83 1385 aa19.62■□□□□ 0.73
PTPRE-203ENST00000442830 PLSCR1O15162 318 aa19.62■□□□□ 0.73
PTPRE-203ENST00000442830 CARD10Q9BWT7 1032 aa19.62■□□□□ 0.73
PTPRE-203ENST00000442830 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
PTPRE-203ENST00000442830 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
PTPRE-203ENST00000442830 CARD11Q9BXL7 1154 aa19.6■□□□□ 0.73
PTPRE-203ENST00000442830 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
PTPRE-203ENST00000442830 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
PTPRE-203ENST00000442830 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
PTPRE-203ENST00000442830 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
PTPRE-203ENST00000442830 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.72
PTPRE-203ENST00000442830 AXIN2Q9Y2T1 843 aa19.58■□□□□ 0.72
PTPRE-203ENST00000442830 LTN1O94822 1766 aa19.57■□□□□ 0.72
PTPRE-203ENST00000442830 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
PTPRE-203ENST00000442830 EDC4Q6P2E9 1401 aaKnown RBP19.56■□□□□ 0.72
PTPRE-203ENST00000442830 EXOC5O00471 708 aa19.55■□□□□ 0.72
PTPRE-203ENST00000442830 TNS2Q63HR2 1409 aa19.55■□□□□ 0.72
PTPRE-203ENST00000442830 SPON1Q9HCB6 807 aa19.55■□□□□ 0.72
PTPRE-203ENST00000442830 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
PTPRE-203ENST00000442830 FAM208AQ9UK61 1670 aaKnown RBP19.53■□□□□ 0.72
PTPRE-203ENST00000442830 SOX12O15370 315 aa19.53■□□□□ 0.72
PTPRE-203ENST00000442830 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.72
PTPRE-203ENST00000442830 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
PTPRE-203ENST00000442830 ERBB3P21860 1342 aa19.51■□□□□ 0.71
PTPRE-203ENST00000442830 KCNQ2O43526 872 aa19.51■□□□□ 0.71
PTPRE-203ENST00000442830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTPRE-203ENST00000442830 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
PTPRE-203ENST00000442830 PPP1R1BQ9UD71 204 aaPredicted RBP19.51■□□□□ 0.71
PTPRE-203ENST00000442830 NHSQ6T4R5 1651 aa19.5■□□□□ 0.71
PTPRE-203ENST00000442830 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
PTPRE-203ENST00000442830 CASZ1Q86V15 1759 aa19.48■□□□□ 0.71
PTPRE-203ENST00000442830 NME9Q86XW9 330 aa19.47■□□□□ 0.71
PTPRE-203ENST00000442830 A0A1W2PP64 1363 aa19.46■□□□□ 0.71
PTPRE-203ENST00000442830 IL2RBP14784 551 aa19.46■□□□□ 0.71
PTPRE-203ENST00000442830 NLRP2Q9NX02 1062 aa19.46■□□□□ 0.71
PTPRE-203ENST00000442830 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
PTPRE-203ENST00000442830 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
PTPRE-203ENST00000442830 ANKRD24Q8TF21 1146 aa19.44■□□□□ 0.7
PTPRE-203ENST00000442830 STK32BQ9NY57 414 aa19.44■□□□□ 0.7
PTPRE-203ENST00000442830 TXNRD1Q16881 649 aa19.43■□□□□ 0.7
PTPRE-203ENST00000442830 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
PTPRE-203ENST00000442830 IP6K1Q92551 441 aa19.41■□□□□ 0.7
PTPRE-203ENST00000442830 BTAF1O14981 1849 aa19.41■□□□□ 0.7
PTPRE-203ENST00000442830 COG3Q96JB2 828 aa19.4■□□□□ 0.7
PTPRE-203ENST00000442830 SLC15A2Q16348 729 aa19.39■□□□□ 0.69
PTPRE-203ENST00000442830 PROM2Q8N271 834 aa19.39■□□□□ 0.69
PTPRE-203ENST00000442830 TESK2Q96S53 571 aa19.39■□□□□ 0.69
PTPRE-203ENST00000442830 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
PTPRE-203ENST00000442830 PTF1AQ7RTS3 328 aa19.38■□□□□ 0.69
PTPRE-203ENST00000442830 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
PTPRE-203ENST00000442830 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
PTPRE-203ENST00000442830 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
PTPRE-203ENST00000442830 PAPPAQ13219 1627 aa19.36■□□□□ 0.69
PTPRE-203ENST00000442830 QSER1Q2KHR3 1735 aa19.35■□□□□ 0.69
PTPRE-203ENST00000442830 TMF1P82094 1093 aa19.35■□□□□ 0.69
PTPRE-203ENST00000442830 MTFR1LQ9H019 292 aa19.35■□□□□ 0.69
PTPRE-203ENST00000442830 MYOM1P52179 1685 aa19.34■□□□□ 0.69
PTPRE-203ENST00000442830 YY1P25490 414 aa19.34■□□□□ 0.69
PTPRE-203ENST00000442830 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
PTPRE-203ENST00000442830 HMGB2P26583 209 aaKnown RBP19.33■□□□□ 0.68
PTPRE-203ENST00000442830 AMPHP49418 695 aa19.33■□□□□ 0.68
PTPRE-203ENST00000442830 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
PTPRE-203ENST00000442830 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
PTPRE-203ENST00000442830 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
PTPRE-203ENST00000442830 ZBTB7AO95365 584 aa19.32■□□□□ 0.68
PTPRE-203ENST00000442830 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
PTPRE-203ENST00000442830 MAP3K19Q56UN5 1328 aa19.31■□□□□ 0.68
PTPRE-203ENST00000442830 HOXC9P31274 260 aa19.31■□□□□ 0.68
PTPRE-203ENST00000442830 USP47Q96K76 1375 aa19.31■□□□□ 0.68
PTPRE-203ENST00000442830 PTGER2P43116 358 aa19.3■□□□□ 0.68
PTPRE-203ENST00000442830 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
PTPRE-203ENST00000442830 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
PTPRE-203ENST00000442830 LTV1Q96GA3 475 aaPredicted RBP19.29■□□□□ 0.68
PTPRE-203ENST00000442830 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
PTPRE-203ENST00000442830 DDX54Q8TDD1 881 aaKnown RBP19.28■□□□□ 0.68
PTPRE-203ENST00000442830 SLC16A10Q8TF71 515 aa19.28■□□□□ 0.68
PTPRE-203ENST00000442830 RGPD2P0DJD1 1756 aa19.28■□□□□ 0.68
PTPRE-203ENST00000442830 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
PTPRE-203ENST00000442830 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
PTPRE-203ENST00000442830 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.68
PTPRE-203ENST00000442830 LY75O60449 1722 aa19.27■□□□□ 0.68
PTPRE-203ENST00000442830 SHANK3Q9BYB0 1731 aa19.27■□□□□ 0.68
PTPRE-203ENST00000442830 MAP3K5Q99683 1374 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms