RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 IQSEC2Q5JU85 1478 aa26.64■■□□□ 1.85
VRK2-207ENST00000440705 NEFMP07197 916 aa26.63■■□□□ 1.85
VRK2-207ENST00000440705 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
VRK2-207ENST00000440705 ZNF521Q96K83 1311 aa26.63■■□□□ 1.85
VRK2-207ENST00000440705 IP6K1Q92551 441 aa26.61■■□□□ 1.85
VRK2-207ENST00000440705 PHRF1Q9P1Y6 1649 aaKnown RBP26.61■■□□□ 1.85
VRK2-207ENST00000440705 HMOX1P09601 288 aa26.6■■□□□ 1.85
VRK2-207ENST00000440705 ARHGEF25Q86VW2 580 aa26.6■■□□□ 1.85
VRK2-207ENST00000440705 NHSL1Q5SYE7 1610 aa26.6■■□□□ 1.85
VRK2-207ENST00000440705 PRKAR2BP31323 418 aa26.59■■□□□ 1.85
VRK2-207ENST00000440705 CCDC27Q2M243 656 aa26.58■■□□□ 1.85
VRK2-207ENST00000440705 MED1Q15648 1581 aaPredicted RBP26.58■■□□□ 1.85
VRK2-207ENST00000440705 GOLGA2Q08379 1002 aa26.57■■□□□ 1.84
VRK2-207ENST00000440705 RGPD1P0DJD0 1748 aa26.57■■□□□ 1.84
VRK2-207ENST00000440705 NEUROD2Q15784 382 aa26.57■■□□□ 1.84
VRK2-207ENST00000440705 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
VRK2-207ENST00000440705 WWC1Q8IX03 1113 aa26.56■■□□□ 1.84
VRK2-207ENST00000440705 RRP7AQ9Y3A4 280 aaKnown RBP26.56■■□□□ 1.84
VRK2-207ENST00000440705 TMPOP42166 694 aaKnown RBP26.55■■□□□ 1.84
VRK2-207ENST00000440705 SULT6B1Q6IMI4 303 aa26.55■■□□□ 1.84
VRK2-207ENST00000440705 CDCA7LQ96GN5 454 aa26.55■■□□□ 1.84
VRK2-207ENST00000440705 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
VRK2-207ENST00000440705 ZBTB7CA1YPR0 619 aa26.53■■□□□ 1.84
VRK2-207ENST00000440705 ROBO1Q9Y6N7 1651 aa26.53■■□□□ 1.84
VRK2-207ENST00000440705 GTF3C3Q9Y5Q9 886 aa26.52■■□□□ 1.84
VRK2-207ENST00000440705 IGSF1Q8N6C5 1336 aa26.52■■□□□ 1.84
VRK2-207ENST00000440705 WDR63Q8IWG1 891 aa26.51■■□□□ 1.83
VRK2-207ENST00000440705 EYA1Q99502 592 aa26.51■■□□□ 1.83
VRK2-207ENST00000440705 CRYBG1Q9Y4K1 1723 aa26.5■■□□□ 1.83
VRK2-207ENST00000440705 TOM1O60784 492 aa26.5■■□□□ 1.83
VRK2-207ENST00000440705 ZC3H6P61129 1189 aaKnown RBP26.5■■□□□ 1.83
VRK2-207ENST00000440705 KDRP35968 1356 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 RIPK4P57078 832 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 SLFN5Q08AF3 891 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 AEBP1Q8IUX7 1158 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 CABLES1Q8TDN4 633 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 LTV1Q96GA3 475 aaPredicted RBP26.49■■□□□ 1.83
VRK2-207ENST00000440705 PHACTR3Q96KR7 559 aa26.49■■□□□ 1.83
VRK2-207ENST00000440705 E9PSI1 815 aa26.48■■□□□ 1.83
VRK2-207ENST00000440705 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
VRK2-207ENST00000440705 AHDC1Q5TGY3 1603 aaPredicted RBP26.48■■□□□ 1.83
VRK2-207ENST00000440705 TRMT2AQ8IZ69 625 aaKnown RBP26.46■■□□□ 1.83
VRK2-207ENST00000440705 LRRC59Q96AG4 307 aaKnown RBP26.46■■□□□ 1.83
VRK2-207ENST00000440705 SUPT16HQ9Y5B9 1047 aaKnown RBP26.46■■□□□ 1.83
VRK2-207ENST00000440705 CPDO75976 1380 aa26.45■■□□□ 1.83
VRK2-207ENST00000440705 TRIM35Q9UPQ4 493 aa26.45■■□□□ 1.82
VRK2-207ENST00000440705 DUSP27Q5VZP5 1158 aa26.44■■□□□ 1.82
VRK2-207ENST00000440705 ABCC6O95255 1503 aa26.44■■□□□ 1.82
VRK2-207ENST00000440705 ANKRD24Q8TF21 1146 aa26.42■■□□□ 1.82
VRK2-207ENST00000440705 AXIN2Q9Y2T1 843 aa26.42■■□□□ 1.82
VRK2-207ENST00000440705 HAP1P54257 671 aaPredicted RBP26.41■■□□□ 1.82
VRK2-207ENST00000440705 LMOD3Q0VAK6 560 aa26.41■■□□□ 1.82
VRK2-207ENST00000440705 SPINK5Q9NQ38 1064 aaPredicted RBP26.41■■□□□ 1.82
VRK2-207ENST00000440705 NEFLP07196 543 aa26.4■■□□□ 1.82
VRK2-207ENST00000440705 KIAA0232Q92628 1395 aa26.4■■□□□ 1.82
VRK2-207ENST00000440705 COL18A1P39060 1754 aa26.39■■□□□ 1.82
VRK2-207ENST00000440705 NBPF6Q5VWK0 638 aa26.39■■□□□ 1.82
VRK2-207ENST00000440705 NBPF4Q96M43 638 aa26.39■■□□□ 1.82
VRK2-207ENST00000440705 RGPD5Q99666 1765 aa26.39■■□□□ 1.81
VRK2-207ENST00000440705 IL16Q14005 1332 aa26.38■■□□□ 1.81
VRK2-207ENST00000440705 RCAN3Q9UKA8 241 aa26.38■■□□□ 1.81
VRK2-207ENST00000440705 ABCA3Q99758 1704 aa26.37■■□□□ 1.81
VRK2-207ENST00000440705 ERBB3P21860 1342 aa26.37■■□□□ 1.81
VRK2-207ENST00000440705 DLG5Q8TDM6 1919 aa26.37■■□□□ 1.81
VRK2-207ENST00000440705 CALD1Q05682 793 aaKnown RBP26.37■■□□□ 1.81
VRK2-207ENST00000440705 MYH16Q9H6N6 1097 aa26.37■■□□□ 1.81
VRK2-207ENST00000440705 UBAP1LF5GYI3 381 aa26.35■■□□□ 1.81
VRK2-207ENST00000440705 PIP4K2BP78356 416 aa26.35■■□□□ 1.81
VRK2-207ENST00000440705 PRDM11Q9NQV5 511 aa26.35■■□□□ 1.81
VRK2-207ENST00000440705 CHRNA2Q15822 529 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 GAS2L2Q8NHY3 880 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 RGPD2P0DJD1 1756 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 USHBP1Q8N6Y0 703 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 NCAPD2Q15021 1401 aa26.34■■□□□ 1.81
VRK2-207ENST00000440705 MTHFSDQ2M296 383 aaKnown RBP26.32■■□□□ 1.8
VRK2-207ENST00000440705 CAMTA1Q9Y6Y1 1673 aa26.32■■□□□ 1.8
VRK2-207ENST00000440705 COL22A1Q8NFW1 1626 aaPredicted RBP26.31■■□□□ 1.8
VRK2-207ENST00000440705 CERKQ8TCT0 537 aa26.31■■□□□ 1.8
VRK2-207ENST00000440705 FAM208AQ9UK61 1670 aaKnown RBP26.31■■□□□ 1.8
VRK2-207ENST00000440705 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
VRK2-207ENST00000440705 COL16A1Q07092 1604 aaPredicted RBP26.29■■□□□ 1.8
VRK2-207ENST00000440705 CSB-PGBD3P0DP91 1061 aa26.28■■□□□ 1.8
VRK2-207ENST00000440705 FKBP8Q14318 412 aa26.28■■□□□ 1.8
VRK2-207ENST00000440705 NLRP2Q9NX02 1062 aa26.28■■□□□ 1.8
VRK2-207ENST00000440705 LMO7Q8WWI1 1683 aa26.27■■□□□ 1.8
VRK2-207ENST00000440705 HTATSF1O43719 755 aaKnown RBP26.27■■□□□ 1.8
VRK2-207ENST00000440705 RTF1Q92541 710 aaKnown RBP26.26■■□□□ 1.79
VRK2-207ENST00000440705 FAM83GA6ND36 823 aa26.25■■□□□ 1.79
VRK2-207ENST00000440705 GNAI1P63096 354 aa26.25■■□□□ 1.79
VRK2-207ENST00000440705 AMOTQ4VCS5 1084 aa26.25■■□□□ 1.79
VRK2-207ENST00000440705 THUMPD2Q9BTF0 503 aaKnown RBP26.25■■□□□ 1.79
VRK2-207ENST00000440705 IFT57Q9NWB7 429 aa26.25■■□□□ 1.79
VRK2-207ENST00000440705 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
VRK2-207ENST00000440705 PLEKHO1Q53GL0 409 aaPredicted RBP26.24■■□□□ 1.79
VRK2-207ENST00000440705 GNAT3A8MTJ3 354 aa26.22■■□□□ 1.79
VRK2-207ENST00000440705 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
VRK2-207ENST00000440705 TSR2Q969E8 191 aaKnown RBP26.22■■□□□ 1.79
VRK2-207ENST00000440705 CFAP44Q96MT7 982 aa26.22■■□□□ 1.79
VRK2-207ENST00000440705 WDR17Q8IZU2 1322 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms