RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-218ENST00000439806 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
CPNE1-218ENST00000439806 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
CPNE1-218ENST00000439806 AMOTL2Q9Y2J4 779 aa13.35□□□□□ -0.27
CPNE1-218ENST00000439806 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-218ENST00000439806 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
CPNE1-218ENST00000439806 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
CPNE1-218ENST00000439806 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
CPNE1-218ENST00000439806 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
CPNE1-218ENST00000439806 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
CPNE1-218ENST00000439806 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
CPNE1-218ENST00000439806 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
CPNE1-218ENST00000439806 ALDH1L2Q3SY69 923 aa13.33□□□□□ -0.28
CPNE1-218ENST00000439806 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
CPNE1-218ENST00000439806 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-218ENST00000439806 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-218ENST00000439806 GNAI1P63096 354 aa13.32□□□□□ -0.28
CPNE1-218ENST00000439806 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
CPNE1-218ENST00000439806 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
CPNE1-218ENST00000439806 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
CPNE1-218ENST00000439806 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
CPNE1-218ENST00000439806 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
CPNE1-218ENST00000439806 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-218ENST00000439806 C8orf34Q49A92 452 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
CPNE1-218ENST00000439806 PCDHB15Q9Y5E8 787 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
CPNE1-218ENST00000439806 TRIM27P14373 513 aa13.29□□□□□ -0.28
CPNE1-218ENST00000439806 NGDNQ8NEJ9 315 aaKnown RBP13.29□□□□□ -0.28
CPNE1-218ENST00000439806 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
CPNE1-218ENST00000439806 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
CPNE1-218ENST00000439806 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
CPNE1-218ENST00000439806 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
CPNE1-218ENST00000439806 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
CPNE1-218ENST00000439806 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
CPNE1-218ENST00000439806 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
CPNE1-218ENST00000439806 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
CPNE1-218ENST00000439806 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.28
CPNE1-218ENST00000439806 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
CPNE1-218ENST00000439806 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
CPNE1-218ENST00000439806 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
CPNE1-218ENST00000439806 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
CPNE1-218ENST00000439806 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
CPNE1-218ENST00000439806 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
CPNE1-218ENST00000439806 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-218ENST00000439806 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
CPNE1-218ENST00000439806 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
CPNE1-218ENST00000439806 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-218ENST00000439806 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
CPNE1-218ENST00000439806 SOX12O15370 315 aa13.24□□□□□ -0.29
CPNE1-218ENST00000439806 VAMP4O75379 141 aa13.24□□□□□ -0.29
CPNE1-218ENST00000439806 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
CPNE1-218ENST00000439806 MARF1Q9Y4F3 1742 aaKnown RBP13.24□□□□□ -0.29
CPNE1-218ENST00000439806 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
CPNE1-218ENST00000439806 FLT4P35916 1363 aa13.23□□□□□ -0.29
CPNE1-218ENST00000439806 KCNA6P17658 529 aa13.23□□□□□ -0.29
CPNE1-218ENST00000439806 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-218ENST00000439806 AEBP1Q8IUX7 1158 aa13.23□□□□□ -0.29
CPNE1-218ENST00000439806 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 AMPHP49418 695 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 HDAC1Q13547 482 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-218ENST00000439806 NBR1Q14596 966 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 ARHGAP45Q92619 1136 aa13.22□□□□□ -0.29
CPNE1-218ENST00000439806 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-218ENST00000439806 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
CPNE1-218ENST00000439806 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-218ENST00000439806 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
CPNE1-218ENST00000439806 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
CPNE1-218ENST00000439806 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
CPNE1-218ENST00000439806 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-218ENST00000439806 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
CPNE1-218ENST00000439806 LTN1O94822 1766 aa13.2□□□□□ -0.3
CPNE1-218ENST00000439806 NLRP6P59044 892 aa13.19□□□□□ -0.3
CPNE1-218ENST00000439806 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
CPNE1-218ENST00000439806 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
CPNE1-218ENST00000439806 KIF24Q5T7B8 1368 aa13.18□□□□□ -0.3
CPNE1-218ENST00000439806 ABCC4O15439 1325 aa13.17□□□□□ -0.3
CPNE1-218ENST00000439806 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
CPNE1-218ENST00000439806 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
CPNE1-218ENST00000439806 MCM10Q7L590 875 aa13.16□□□□□ -0.3
CPNE1-218ENST00000439806 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
CPNE1-218ENST00000439806 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
CPNE1-218ENST00000439806 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
CPNE1-218ENST00000439806 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
CPNE1-218ENST00000439806 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
CPNE1-218ENST00000439806 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
CPNE1-218ENST00000439806 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CPNE1-218ENST00000439806 CHL1O00533 1208 aa13.15□□□□□ -0.3
CPNE1-218ENST00000439806 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
CPNE1-218ENST00000439806 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-218ENST00000439806 CRB1P82279 1406 aa13.14□□□□□ -0.31
CPNE1-218ENST00000439806 HOXC9P31274 260 aa13.14□□□□□ -0.31
CPNE1-218ENST00000439806 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
CPNE1-218ENST00000439806 EYA1Q99502 592 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms