RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 THSD7AQ9UPZ6 1657 aa33.43■■■□□ 2.94
CPNE1-217ENST00000439669 POLR3GLQ9BT43 218 aa33.42■■■□□ 2.94
CPNE1-217ENST00000439669 AXIN2Q9Y2T1 843 aa33.41■■■□□ 2.94
CPNE1-217ENST00000439669 MYOM1P52179 1685 aa33.41■■■□□ 2.94
CPNE1-217ENST00000439669 TCP11L2Q8N4U5 519 aa33.4■■■□□ 2.94
CPNE1-217ENST00000439669 CRB1P82279 1406 aa33.39■■■□□ 2.94
CPNE1-217ENST00000439669 COG3Q96JB2 828 aa33.39■■■□□ 2.94
CPNE1-217ENST00000439669 BARGINQ6ZT62 677 aa33.38■■■□□ 2.93
CPNE1-217ENST00000439669 TOM1L2Q6ZVM7 507 aa33.37■■■□□ 2.93
CPNE1-217ENST00000439669 ABCC6O95255 1503 aa33.36■■■□□ 2.93
CPNE1-217ENST00000439669 RGPD5Q99666 1765 aa33.35■■■□□ 2.93
CPNE1-217ENST00000439669 CSB-PGBD3P0DP91 1061 aa33.35■■■□□ 2.93
CPNE1-217ENST00000439669 THRAP3Q9Y2W1 955 aaKnown RBP33.35■■■□□ 2.93
CPNE1-217ENST00000439669 WDR17Q8IZU2 1322 aa33.34■■■□□ 2.93
CPNE1-217ENST00000439669 LTN1O94822 1766 aa33.34■■■□□ 2.93
CPNE1-217ENST00000439669 CCDC125Q86Z20 511 aa33.33■■■□□ 2.93
CPNE1-217ENST00000439669 GGNBP2Q9H3C7 697 aa33.31■■■□□ 2.92
CPNE1-217ENST00000439669 BLMP54132 1417 aaPredicted RBP33.3■■■□□ 2.92
CPNE1-217ENST00000439669 NSD3Q9BZ95 1437 aa33.3■■■□□ 2.92
CPNE1-217ENST00000439669 FYB1O15117 783 aa33.29■■■□□ 2.92
CPNE1-217ENST00000439669 FAM182BQ5T319 152 aa33.29■■■□□ 2.92
CPNE1-217ENST00000439669 CARD14Q9BXL6 1004 aa33.28■■■□□ 2.92
CPNE1-217ENST00000439669 KIF20BQ96Q89 1820 aa33.28■■■□□ 2.92
CPNE1-217ENST00000439669 SF3B2Q13435 895 aaKnown RBP33.26■■■□□ 2.91
CPNE1-217ENST00000439669 PDE3BQ13370 1112 aa33.25■■■□□ 2.91
CPNE1-217ENST00000439669 CARD10Q9BWT7 1032 aa33.24■■■□□ 2.91
CPNE1-217ENST00000439669 EP400Q96L91 3159 aa33.24■■■□□ 2.91
CPNE1-217ENST00000439669 ERBB3P21860 1342 aa33.23■■■□□ 2.91
CPNE1-217ENST00000439669 FBLN1P23142 703 aa33.22■■■□□ 2.91
CPNE1-217ENST00000439669 MAP3K19Q56UN5 1328 aa33.22■■■□□ 2.91
CPNE1-217ENST00000439669 PARP4Q9UKK3 1724 aaKnown RBP33.22■■■□□ 2.91
CPNE1-217ENST00000439669 ANKRD24Q8TF21 1146 aa33.21■■■□□ 2.91
CPNE1-217ENST00000439669 IP6K1Q92551 441 aa33.2■■■□□ 2.91
CPNE1-217ENST00000439669 CCDC7Q96M83 1385 aa33.2■■■□□ 2.9
CPNE1-217ENST00000439669 AMPHP49418 695 aa33.19■■■□□ 2.9
CPNE1-217ENST00000439669 NLRP2Q9NX02 1062 aa33.19■■■□□ 2.9
CPNE1-217ENST00000439669 WNK3Q9BYP7 1800 aa33.18■■■□□ 2.9
CPNE1-217ENST00000439669 C11orf95C9JLR9 678 aaPredicted RBP33.17■■■□□ 2.9
CPNE1-217ENST00000439669 FAM196AQ6ZSG2 479 aa33.17■■■□□ 2.9
CPNE1-217ENST00000439669 CGNL1Q0VF96 1302 aa33.17■■■□□ 2.9
CPNE1-217ENST00000439669 LRRC37A3O60309 1634 aa33.17■■■□□ 2.9
CPNE1-217ENST00000439669 RRS1Q15050 365 aaKnown RBP33.16■■■□□ 2.9
CPNE1-217ENST00000439669 CDCA7Q9BWT1 371 aaPredicted RBP33.16■■■□□ 2.9
CPNE1-217ENST00000439669 DDB1Q16531 1140 aa33.15■■■□□ 2.9
CPNE1-217ENST00000439669 DEFB132Q7Z7B7 95 aa33.15■■■□□ 2.9
CPNE1-217ENST00000439669 LTV1Q96GA3 475 aaPredicted RBP33.15■■■□□ 2.9
CPNE1-217ENST00000439669 HOXC9P31274 260 aa33.14■■■□□ 2.9
CPNE1-217ENST00000439669 PANK3Q9H999 370 aa33.13■■■□□ 2.89
CPNE1-217ENST00000439669 RGPD1P0DJD0 1748 aa33.13■■■□□ 2.89
CPNE1-217ENST00000439669 DISP2A7MBM2 1401 aa33.12■■■□□ 2.89
CPNE1-217ENST00000439669 RTL1A6NKG5 1358 aa33.12■■■□□ 2.89
CPNE1-217ENST00000439669 BAG6P46379 1132 aa33.1■■■□□ 2.89
CPNE1-217ENST00000439669 TRIM37O94972 964 aa33.09■■■□□ 2.89
CPNE1-217ENST00000439669 FAM208AQ9UK61 1670 aaKnown RBP33.07■■■□□ 2.89
CPNE1-217ENST00000439669 KIF7Q2M1P5 1343 aa33.07■■■□□ 2.88
CPNE1-217ENST00000439669 OVOS2A0A0G2JMS6 1433 aa33.07■■■□□ 2.88
CPNE1-217ENST00000439669 TNS1Q9HBL0 1735 aaKnown RBP33.05■■■□□ 2.88
CPNE1-217ENST00000439669 EXOC5O00471 708 aa33.04■■■□□ 2.88
CPNE1-217ENST00000439669 IL2RBP14784 551 aa33.04■■■□□ 2.88
CPNE1-217ENST00000439669 TNS2Q63HR2 1409 aa33.02■■■□□ 2.88
CPNE1-217ENST00000439669 FLT4P35916 1363 aa33.02■■■□□ 2.88
CPNE1-217ENST00000439669 SMG6Q86US8 1419 aaKnown RBP33.02■■■□□ 2.88
CPNE1-217ENST00000439669 PEAK1Q9H792 1746 aa33.01■■■□□ 2.87
CPNE1-217ENST00000439669 ANKRD26Q9UPS8 1709 aa33■■■□□ 2.87
CPNE1-217ENST00000439669 KIF24Q5T7B8 1368 aa33■■■□□ 2.87
CPNE1-217ENST00000439669 EN1Q05925 392 aaPredicted RBP33■■■□□ 2.87
CPNE1-217ENST00000439669 MARCH10Q8NA82 808 aaPredicted RBP33■■■□□ 2.87
CPNE1-217ENST00000439669 EMILIN1Q9Y6C2 1016 aa33■■■□□ 2.87
CPNE1-217ENST00000439669 INSRP06213 1382 aa32.98■■■□□ 2.87
CPNE1-217ENST00000439669 PPM1GO15355 546 aaPredicted RBP32.98■■■□□ 2.87
CPNE1-217ENST00000439669 HSP90AB2PQ58FF8 381 aa32.98■■■□□ 2.87
CPNE1-217ENST00000439669 APBA3O96018 575 aa32.97■■■□□ 2.87
CPNE1-217ENST00000439669 TNNT2P45379 298 aaPredicted RBP32.97■■■□□ 2.87
CPNE1-217ENST00000439669 NSD2O96028 1365 aa32.96■■■□□ 2.87
CPNE1-217ENST00000439669 KNSTRNQ9Y448 316 aa32.96■■■□□ 2.87
CPNE1-217ENST00000439669 RGPD2P0DJD1 1756 aa32.96■■■□□ 2.87
CPNE1-217ENST00000439669 NBPF6Q5VWK0 638 aa32.91■■■□□ 2.86
CPNE1-217ENST00000439669 NBPF4Q96M43 638 aa32.91■■■□□ 2.86
CPNE1-217ENST00000439669 MAP2P11137 1827 aaKnown RBP32.91■■■□□ 2.86
CPNE1-217ENST00000439669 EZH2Q15910 746 aaKnown RBP32.9■■■□□ 2.86
CPNE1-217ENST00000439669 USHBP1Q8N6Y0 703 aa32.9■■■□□ 2.86
CPNE1-217ENST00000439669 POLKQ9UBT6 870 aa32.9■■■□□ 2.86
CPNE1-217ENST00000439669 BCL9O00512 1426 aa32.9■■■□□ 2.86
CPNE1-217ENST00000439669 SBF2Q86WG5 1849 aa32.89■■■□□ 2.86
CPNE1-217ENST00000439669 MORC1Q86VD1 984 aa32.88■■■□□ 2.85
CPNE1-217ENST00000439669 WASHC2AQ641Q2 1341 aa32.87■■■□□ 2.85
CPNE1-217ENST00000439669 CAMKK2Q96RR4 588 aa32.87■■■□□ 2.85
CPNE1-217ENST00000439669 MEGF6O75095 1541 aa32.86■■■□□ 2.85
CPNE1-217ENST00000439669 PARD3Q8TEW0 1356 aa32.85■■■□□ 2.85
CPNE1-217ENST00000439669 BCL11BQ9C0K0 894 aaPredicted RBP32.85■■■□□ 2.85
CPNE1-217ENST00000439669 PTF1AQ7RTS3 328 aa32.83■■■□□ 2.85
CPNE1-217ENST00000439669 DDX54Q8TDD1 881 aaKnown RBP32.83■■■□□ 2.85
CPNE1-217ENST00000439669 RAPGEF4Q8WZA2 1011 aa32.83■■■□□ 2.85
CPNE1-217ENST00000439669 AMER1Q5JTC6 1135 aaPredicted RBP32.82■■■□□ 2.84
CPNE1-217ENST00000439669 ACSBG1Q96GR2 724 aa32.8■■■□□ 2.84
CPNE1-217ENST00000439669 TATP17735 454 aaPredicted RBP32.79■■■□□ 2.84
CPNE1-217ENST00000439669 ZCRB1Q8TBF4 217 aaKnown RBP32.79■■■□□ 2.84
CPNE1-217ENST00000439669 NHSQ6T4R5 1651 aa32.76■■■□□ 2.84
CPNE1-217ENST00000439669 RREB1Q92766 1687 aa32.76■■■□□ 2.84
CPNE1-217ENST00000439669 KCNQ2O43526 872 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms