RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 NACAP1Q9BZK3 213 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 ME1P48163 572 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 CCDC181Q5TID7 509 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
LRCH3-206ENST00000438796 SCLT1Q96NL6 688 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 TSPY26PQ9H489 355 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
LRCH3-206ENST00000438796 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 HIP1O00291 1037 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 LRP2BPQ9P2M1 347 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 ERLIN2O94905 339 aa16.33■□□□□ 0.2
LRCH3-206ENST00000438796 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
LRCH3-206ENST00000438796 ZRSR2Q15696 482 aaKnown RBP16.32■□□□□ 0.2
LRCH3-206ENST00000438796 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
LRCH3-206ENST00000438796 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
LRCH3-206ENST00000438796 AACSQ86V21 672 aa16.32■□□□□ 0.2
LRCH3-206ENST00000438796 BCAR3O75815 825 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-206ENST00000438796 STIM1Q13586 685 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 ERCC4Q92889 916 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-206ENST00000438796 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
LRCH3-206ENST00000438796 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
LRCH3-206ENST00000438796 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
LRCH3-206ENST00000438796 CYP46A1Q9Y6A2 500 aa16.3■□□□□ 0.2
LRCH3-206ENST00000438796 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
LRCH3-206ENST00000438796 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
LRCH3-206ENST00000438796 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 TRMT1LQ7Z2T5 733 aaKnown RBP16.29■□□□□ 0.2
LRCH3-206ENST00000438796 GOLGA6L10A6NI86 522 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 LRRCC1Q9C099 1032 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
LRCH3-206ENST00000438796 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
LRCH3-206ENST00000438796 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
LRCH3-206ENST00000438796 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
LRCH3-206ENST00000438796 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
LRCH3-206ENST00000438796 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
LRCH3-206ENST00000438796 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
LRCH3-206ENST00000438796 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
LRCH3-206ENST00000438796 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
LRCH3-206ENST00000438796 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.2
LRCH3-206ENST00000438796 LIG1P18858 919 aa16.27■□□□□ 0.2
LRCH3-206ENST00000438796 TRAK2O60296 914 aa16.27■□□□□ 0.19
LRCH3-206ENST00000438796 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.19
LRCH3-206ENST00000438796 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.19
LRCH3-206ENST00000438796 ANKRD18AQ8IVF6 992 aa16.27■□□□□ 0.19
LRCH3-206ENST00000438796 PSMD1Q99460 953 aa16.27■□□□□ 0.19
LRCH3-206ENST00000438796 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
LRCH3-206ENST00000438796 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
LRCH3-206ENST00000438796 TAF3Q5VWG9 929 aa16.26■□□□□ 0.19
LRCH3-206ENST00000438796 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
LRCH3-206ENST00000438796 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
LRCH3-206ENST00000438796 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
LRCH3-206ENST00000438796 IGHMBP2P38935 993 aaKnown RBP16.26■□□□□ 0.19
LRCH3-206ENST00000438796 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-206ENST00000438796 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
LRCH3-206ENST00000438796 MINDY4BA8MYZ0 360 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
LRCH3-206ENST00000438796 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
LRCH3-206ENST00000438796 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
LRCH3-206ENST00000438796 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 TMOD2Q9NZR1 351 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 PDCP20941 246 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 PLCD3Q8N3E9 789 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
LRCH3-206ENST00000438796 ZPR1O75312 459 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 GRM1Q13255 1194 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 CA8P35219 290 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
LRCH3-206ENST00000438796 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
LRCH3-206ENST00000438796 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
LRCH3-206ENST00000438796 BMP2KQ9NSY1 1161 aaPredicted RBP16.23■□□□□ 0.19
LRCH3-206ENST00000438796 DESP17661 470 aa16.23■□□□□ 0.19
LRCH3-206ENST00000438796 SRGAP3O43295 1099 aa16.23■□□□□ 0.19
LRCH3-206ENST00000438796 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
LRCH3-206ENST00000438796 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
LRCH3-206ENST00000438796 METTL24Q5JXM2 366 aa16.23■□□□□ 0.19
LRCH3-206ENST00000438796 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
LRCH3-206ENST00000438796 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
LRCH3-206ENST00000438796 SRCIN1Q9C0H9 1055 aa16.22■□□□□ 0.19
LRCH3-206ENST00000438796 DACH1Q9UI36 760 aa16.22■□□□□ 0.19
LRCH3-206ENST00000438796 LUC7LQ9NQ29 371 aaKnown RBP16.22■□□□□ 0.19
LRCH3-206ENST00000438796 CWC15Q9P013 229 aaKnown RBP16.22■□□□□ 0.19
LRCH3-206ENST00000438796 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms