RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 APBA3O96018 575 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 EVA1CP58658 441 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 NLRP6P59044 892 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 BTAF1O14981 1849 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
RPE-211ENST00000438265 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
RPE-211ENST00000438265 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
RPE-211ENST00000438265 SOX12O15370 315 aa11.77□□□□□ -0.53
RPE-211ENST00000438265 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
RPE-211ENST00000438265 PDGFDQ9GZP0 370 aaPredicted RBP11.77□□□□□ -0.53
RPE-211ENST00000438265 MYOM1P52179 1685 aa11.76□□□□□ -0.53
RPE-211ENST00000438265 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
RPE-211ENST00000438265 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
RPE-211ENST00000438265 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
RPE-211ENST00000438265 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
RPE-211ENST00000438265 PROM2Q8N271 834 aa11.75□□□□□ -0.53
RPE-211ENST00000438265 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
RPE-211ENST00000438265 CCER1Q8TC90 406 aaPredicted RBP11.75□□□□□ -0.53
RPE-211ENST00000438265 SBNO2Q9Y2G9 1366 aa11.75□□□□□ -0.53
RPE-211ENST00000438265 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
RPE-211ENST00000438265 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
RPE-211ENST00000438265 THRAP3Q9Y2W1 955 aaKnown RBP11.74□□□□□ -0.53
RPE-211ENST00000438265 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
RPE-211ENST00000438265 OVOS2A0A0G2JMS6 1433 aa11.74□□□□□ -0.53
RPE-211ENST00000438265 OVOS2A0A0J9YW53 1432 aa11.74□□□□□ -0.53
RPE-211ENST00000438265 OVOS2Q6IE36 1432 aa11.74□□□□□ -0.53
RPE-211ENST00000438265 UTRNP46939 3433 aa11.74□□□□□ -0.53
RPE-211ENST00000438265 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
RPE-211ENST00000438265 NME9Q86XW9 330 aa11.73□□□□□ -0.53
RPE-211ENST00000438265 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
RPE-211ENST00000438265 ABCC6O95255 1503 aa11.72□□□□□ -0.53
RPE-211ENST00000438265 PARD3Q8TEW0 1356 aa11.72□□□□□ -0.53
RPE-211ENST00000438265 TOM1L2Q6ZVM7 507 aa11.72□□□□□ -0.53
RPE-211ENST00000438265 FBLN1P23142 703 aa11.71□□□□□ -0.53
RPE-211ENST00000438265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.71□□□□□ -0.537e-7■□□□□ 9.5
RPE-211ENST00000438265 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
RPE-211ENST00000438265 KIF20BQ96Q89 1820 aa11.71□□□□□ -0.54
RPE-211ENST00000438265 TNS2Q63HR2 1409 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 KCNQ2O43526 872 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 DDB1Q16531 1140 aa11.7□□□□□ -0.54
RPE-211ENST00000438265 LY75O60449 1722 aa11.69□□□□□ -0.54
RPE-211ENST00000438265 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
RPE-211ENST00000438265 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
RPE-211ENST00000438265 BCL9O00512 1426 aa11.69□□□□□ -0.54
RPE-211ENST00000438265 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
RPE-211ENST00000438265 TESK2Q96S53 571 aa11.68□□□□□ -0.54
RPE-211ENST00000438265 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
RPE-211ENST00000438265 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
RPE-211ENST00000438265 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
RPE-211ENST00000438265 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
RPE-211ENST00000438265 CHD4Q14839 1912 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 ERBB3P21860 1342 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 ITGB4P16144 1822 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 PLSCR1O15162 318 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
RPE-211ENST00000438265 EDC4Q6P2E9 1401 aaKnown RBP11.66□□□□□ -0.54
RPE-211ENST00000438265 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
RPE-211ENST00000438265 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
RPE-211ENST00000438265 ACSBG1Q96GR2 724 aa11.65□□□□□ -0.54
RPE-211ENST00000438265 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.55
RPE-211ENST00000438265 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
RPE-211ENST00000438265 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
RPE-211ENST00000438265 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
RPE-211ENST00000438265 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
RPE-211ENST00000438265 PTGER2P43116 358 aa11.63□□□□□ -0.55
RPE-211ENST00000438265 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
RPE-211ENST00000438265 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
RPE-211ENST00000438265 MEGF6O75095 1541 aa11.62□□□□□ -0.55
RPE-211ENST00000438265 ZBTB7AO95365 584 aa11.62□□□□□ -0.55
RPE-211ENST00000438265 PUS7Q96PZ0 661 aaKnown RBP11.62□□□□□ -0.55
RPE-211ENST00000438265 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
RPE-211ENST00000438265 USP47Q96K76 1375 aa11.62□□□□□ -0.55
RPE-211ENST00000438265 ZNF827Q17R98 1081 aa11.61□□□□□ -0.55
RPE-211ENST00000438265 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
RPE-211ENST00000438265 LRRC4BQ9NT99 713 aa11.61□□□□□ -0.55
RPE-211ENST00000438265 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
RPE-211ENST00000438265 NSD2O96028 1365 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 EXOC5O00471 708 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 KCNQ4P56696 695 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 SPON1Q9HCB6 807 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
RPE-211ENST00000438265 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
RPE-211ENST00000438265 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
RPE-211ENST00000438265 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
RPE-211ENST00000438265 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
RPE-211ENST00000438265 C5P01031 1676 aa11.59□□□□□ -0.55
RPE-211ENST00000438265 PKD1L3Q7Z443 1732 aa11.58□□□□□ -0.56
RPE-211ENST00000438265 IL2RBP14784 551 aa11.58□□□□□ -0.56
RPE-211ENST00000438265 SLC15A2Q16348 729 aa11.58□□□□□ -0.56
RPE-211ENST00000438265 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
RPE-211ENST00000438265 IP6K1Q92551 441 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 628.9 ms