RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 CSB-PGBD3P0DP91 1061 aa25.57■■□□□ 1.68
HMGN1-207ENST00000436324 DEFB132Q7Z7B7 95 aa25.57■■□□□ 1.68
HMGN1-207ENST00000436324 NFAT5O94916 1531 aa25.57■■□□□ 1.68
HMGN1-207ENST00000436324 CRB1P82279 1406 aa25.56■■□□□ 1.68
HMGN1-207ENST00000436324 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
HMGN1-207ENST00000436324 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
HMGN1-207ENST00000436324 COL18A1P39060 1754 aa25.55■■□□□ 1.68
HMGN1-207ENST00000436324 PDE3BQ13370 1112 aa25.55■■□□□ 1.68
HMGN1-207ENST00000436324 ANKRD36BQ8N2N9 1353 aa25.55■■□□□ 1.68
HMGN1-207ENST00000436324 WDR17Q8IZU2 1322 aa25.54■■□□□ 1.68
HMGN1-207ENST00000436324 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
HMGN1-207ENST00000436324 COG3Q96JB2 828 aa25.51■■□□□ 1.67
HMGN1-207ENST00000436324 OVOS2A0A0J9YW53 1432 aa25.5■■□□□ 1.67
HMGN1-207ENST00000436324 OVOS2Q6IE36 1432 aa25.5■■□□□ 1.67
HMGN1-207ENST00000436324 HSPA5P11021 654 aaKnown RBP25.49■■□□□ 1.67
HMGN1-207ENST00000436324 FAM196AQ6ZSG2 479 aa25.49■■□□□ 1.67
HMGN1-207ENST00000436324 EIF4G2P78344 907 aaKnown RBP eCLIP25.48■■□□□ 1.671e-6■□□□□ 9.4
HMGN1-207ENST00000436324 RGPD5Q99666 1765 aa25.48■■□□□ 1.67
HMGN1-207ENST00000436324 USP54Q70EL1 1684 aa25.48■■□□□ 1.67
HMGN1-207ENST00000436324 FBLN1P23142 703 aa25.47■■□□□ 1.67
HMGN1-207ENST00000436324 BAG6P46379 1132 aa25.47■■□□□ 1.67
HMGN1-207ENST00000436324 CARD10Q9BWT7 1032 aa25.47■■□□□ 1.67
HMGN1-207ENST00000436324 GGNBP2Q9H3C7 697 aa25.47■■□□□ 1.67
HMGN1-207ENST00000436324 TRIM37O94972 964 aa25.46■■□□□ 1.67
HMGN1-207ENST00000436324 EP400Q96L91 3159 aa25.46■■□□□ 1.67
HMGN1-207ENST00000436324 FYB1O15117 783 aa25.45■■□□□ 1.66
HMGN1-207ENST00000436324 DDB1Q16531 1140 aa25.44■■□□□ 1.66
HMGN1-207ENST00000436324 ANKRD24Q8TF21 1146 aa25.44■■□□□ 1.66
HMGN1-207ENST00000436324 NLRP2Q9NX02 1062 aa25.44■■□□□ 1.66
HMGN1-207ENST00000436324 EN1Q05925 392 aaPredicted RBP25.43■■□□□ 1.66
HMGN1-207ENST00000436324 LTV1Q96GA3 475 aaPredicted RBP25.42■■□□□ 1.66
HMGN1-207ENST00000436324 CARD14Q9BXL6 1004 aa25.42■■□□□ 1.66
HMGN1-207ENST00000436324 ABCC6O95255 1503 aa25.42■■□□□ 1.66
HMGN1-207ENST00000436324 ERBB3P21860 1342 aa25.41■■□□□ 1.66
HMGN1-207ENST00000436324 IP6K1Q92551 441 aa25.41■■□□□ 1.66
HMGN1-207ENST00000436324 LTN1O94822 1766 aa25.41■■□□□ 1.66
HMGN1-207ENST00000436324 AMPHP49418 695 aa25.4■■□□□ 1.66
HMGN1-207ENST00000436324 MAP3K19Q56UN5 1328 aa25.39■■□□□ 1.66
HMGN1-207ENST00000436324 CDCA7Q9BWT1 371 aaPredicted RBP25.39■■□□□ 1.66
HMGN1-207ENST00000436324 PARP4Q9UKK3 1724 aaKnown RBP25.39■■□□□ 1.65
HMGN1-207ENST00000436324 CCDC7Q96M83 1385 aa25.39■■□□□ 1.65
HMGN1-207ENST00000436324 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
HMGN1-207ENST00000436324 APBA3O96018 575 aa25.38■■□□□ 1.65
HMGN1-207ENST00000436324 RRS1Q15050 365 aaKnown RBP25.38■■□□□ 1.65
HMGN1-207ENST00000436324 RGPD1P0DJD0 1748 aa25.37■■□□□ 1.65
HMGN1-207ENST00000436324 MYOM1P52179 1685 aa25.36■■□□□ 1.65
HMGN1-207ENST00000436324 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
HMGN1-207ENST00000436324 EXOC5O00471 708 aa25.35■■□□□ 1.65
HMGN1-207ENST00000436324 HOXC9P31274 260 aa25.35■■□□□ 1.65
HMGN1-207ENST00000436324 EZH2Q15910 746 aaKnown RBP25.35■■□□□ 1.65
HMGN1-207ENST00000436324 MARCH10Q8NA82 808 aaPredicted RBP25.35■■□□□ 1.65
HMGN1-207ENST00000436324 DISP2A7MBM2 1401 aa25.35■■□□□ 1.65
HMGN1-207ENST00000436324 OVOS2A0A0G2JMS6 1433 aa25.33■■□□□ 1.65
HMGN1-207ENST00000436324 TNS1Q9HBL0 1735 aaKnown RBP25.32■■□□□ 1.64
HMGN1-207ENST00000436324 IL2RBP14784 551 aa25.31■■□□□ 1.64
HMGN1-207ENST00000436324 CAMKK2Q96RR4 588 aa25.31■■□□□ 1.64
HMGN1-207ENST00000436324 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
HMGN1-207ENST00000436324 C11orf95C9JLR9 678 aaPredicted RBP25.3■■□□□ 1.64
HMGN1-207ENST00000436324 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
HMGN1-207ENST00000436324 CGNL1Q0VF96 1302 aa25.28■■□□□ 1.64
HMGN1-207ENST00000436324 PSDA5PKW4 1024 aaPredicted RBP25.27■■□□□ 1.64
HMGN1-207ENST00000436324 PTF1AQ7RTS3 328 aa25.27■■□□□ 1.64
HMGN1-207ENST00000436324 PANK3Q9H999 370 aa25.27■■□□□ 1.64
HMGN1-207ENST00000436324 RTL1A6NKG5 1358 aa25.26■■□□□ 1.63
HMGN1-207ENST00000436324 PEAK1Q9H792 1746 aa25.26■■□□□ 1.63
HMGN1-207ENST00000436324 TNS2Q63HR2 1409 aa25.25■■□□□ 1.63
HMGN1-207ENST00000436324 HSP90AB2PQ58FF8 381 aa25.24■■□□□ 1.63
HMGN1-207ENST00000436324 EMILIN1Q9Y6C2 1016 aa25.24■■□□□ 1.63
HMGN1-207ENST00000436324 PPM1GO15355 546 aaPredicted RBP25.23■■□□□ 1.63
HMGN1-207ENST00000436324 BCL11BQ9C0K0 894 aaPredicted RBP25.23■■□□□ 1.63
HMGN1-207ENST00000436324 USHBP1Q8N6Y0 703 aa25.22■■□□□ 1.63
HMGN1-207ENST00000436324 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
HMGN1-207ENST00000436324 R3HDM1Q15032 1099 aaKnown RBP25.21■■□□□ 1.63
HMGN1-207ENST00000436324 NBPF6Q5VWK0 638 aa25.21■■□□□ 1.63
HMGN1-207ENST00000436324 ACSBG1Q96GR2 724 aa25.21■■□□□ 1.63
HMGN1-207ENST00000436324 NBPF4Q96M43 638 aa25.21■■□□□ 1.63
HMGN1-207ENST00000436324 DDX54Q8TDD1 881 aaKnown RBP25.2■■□□□ 1.62
HMGN1-207ENST00000436324 FLT4P35916 1363 aa25.19■■□□□ 1.62
HMGN1-207ENST00000436324 PARD3Q8TEW0 1356 aa25.19■■□□□ 1.62
HMGN1-207ENST00000436324 KCNQ2O43526 872 aa25.19■■□□□ 1.62
HMGN1-207ENST00000436324 SMG6Q86US8 1419 aaKnown RBP25.19■■□□□ 1.62
HMGN1-207ENST00000436324 INSRP06213 1382 aa25.18■■□□□ 1.62
HMGN1-207ENST00000436324 BCL9O00512 1426 aa25.18■■□□□ 1.62
HMGN1-207ENST00000436324 FAM208AQ9UK61 1670 aaKnown RBP25.17■■□□□ 1.62
HMGN1-207ENST00000436324 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
HMGN1-207ENST00000436324 KIF7Q2M1P5 1343 aa25.16■■□□□ 1.62
HMGN1-207ENST00000436324 RGPD2P0DJD1 1756 aa25.16■■□□□ 1.62
HMGN1-207ENST00000436324 PLSCR1O15162 318 aa25.15■■□□□ 1.62
HMGN1-207ENST00000436324 KIF24Q5T7B8 1368 aa25.15■■□□□ 1.62
HMGN1-207ENST00000436324 POLKQ9UBT6 870 aa25.14■■□□□ 1.62
HMGN1-207ENST00000436324 NBPF14Q5TI25 921 aa25.13■■□□□ 1.61
HMGN1-207ENST00000436324 ZCRB1Q8TBF4 217 aaKnown RBP25.13■■□□□ 1.61
HMGN1-207ENST00000436324 MEGF6O75095 1541 aa25.12■■□□□ 1.61
HMGN1-207ENST00000436324 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
HMGN1-207ENST00000436324 KNSTRNQ9Y448 316 aa25.12■■□□□ 1.61
HMGN1-207ENST00000436324 TATP17735 454 aaPredicted RBP25.1■■□□□ 1.61
HMGN1-207ENST00000436324 RREB1Q92766 1687 aa25.1■■□□□ 1.61
HMGN1-207ENST00000436324 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
HMGN1-207ENST00000436324 MORC1Q86VD1 984 aa25.09■■□□□ 1.61
HMGN1-207ENST00000436324 PROM2Q8N271 834 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms