RNA–Protein interactions for RNA: ENST00000435991.2

TRAPPC13P1-201, Transcript of trafficking protein particle complex 13 pseudogene 1, humanhuman

BASIC

Gene TRAPPC13P1, Length 1,062 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13P1-201ENST00000435991 UPP2O95045 317 aa10.34□□□□□ -0.75
TRAPPC13P1-201ENST00000435991 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
TRAPPC13P1-201ENST00000435991 VEGFBP49765 207 aa10.33□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 C6orf118Q5T5N4 469 aa10.33□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 GPSM3Q9Y4H4 160 aa10.33□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 AP1G2O75843 785 aa10.32□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 GMPRP36959 345 aa10.32□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 BMP2P12643 396 aa10.31□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 MAN1A2O60476 641 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 PTK2Q05397 1052 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 ZBTB33Q86T24 672 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 KCTD15Q96SI1 283 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 PGPEP1Q9NXJ5 209 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 SOS2Q07890 1332 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 USP17L8P0C7I0 530 aa10.29□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 RFC5P40937 340 aa10.28□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 Q6ZVU0 165 aa10.28□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 PNMA1Q8ND90 353 aa10.28□□□□□ -0.76
TRAPPC13P1-201ENST00000435991 DHX9Q08211 1270 aaKnown RBP10.27□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 ADAM32Q8TC27 787 aa10.26□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 DNMT3LQ9UJW3 386 aa10.26□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 CBLBQ13191 982 aa10.24□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 PCMTD1Q96MG8 357 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 NBPF20Q3BBV1 942 aa10.23□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 ZSCAN1Q8NBB4 408 aa10.23□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 TTLL8A6PVC2 850 aa10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 SPINT1O43278 529 aa10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 PPFIA3O75145 1194 aa10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 TMEM259Q4ZIN3 620 aa10.22□□□□□ -0.77
TRAPPC13P1-201ENST00000435991 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 DZIP3Q86Y13 1208 aaKnown RBP10.18□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 ESPNB1AK53 854 aa10.17□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 PTSQ03393 145 aa10.16□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 AGBL1Q96MI9 1066 aa10.15□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 TMPRSS4Q9NRS4 437 aa10.15□□□□□ -0.78
TRAPPC13P1-201ENST00000435991 FIGNL2A6NMB9 653 aa10.14□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ZNF784Q8NCA9 323 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 GJD4Q96KN9 370 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 LILRA1O75019 489 aa10.13□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ADH1AP07327 375 aa10.13□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 CTSOP43234 321 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 RELBQ01201 579 aa10.13□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ZBBXA8MT70 800 aa10.12□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 RAB15P59190 212 aa10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 NANOS1Q8WY41 292 aaKnown RBP10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 SOCS7O14512 581 aa10.1□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 RNF217Q8TC41 542 aa10.1□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 KDF1Q8NAX2 398 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 ZNF395Q9H8N7 513 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13P1-201ENST00000435991 FBXO45P0C2W1 286 aa10.08□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 PTGIRP43119 386 aa10.08□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 KRT76Q01546 638 aa10.06□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 FOXD4L5Q5VV16 416 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 PCDHB9Q9Y5E1 797 aa10.06□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 ITGA6P23229 1130 aa10.05□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 NR1H3Q13133 447 aa10.03□□□□□ -0.8
TRAPPC13P1-201ENST00000435991 GPR37L1O60883 481 aa10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 MTMR14Q8NCE2 650 aa10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 CNTNAP3BQ96NU0 1288 aa10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 CNTNAP3Q9BZ76 1288 aa10.02□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 RNF144AP50876 292 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
TRAPPC13P1-201ENST00000435991 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms