RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 ZSWIM4Q9H7M6 989 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 RUSC2Q8N2Y8 1516 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 ASB16Q96NS5 453 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 USP17L5A8MUK1 530 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 IGBP1P78318 339 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 NR6A1Q15406 480 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 GABBR1Q9UBS5 961 aa7.95□□□□□ -1.14
VRK2-206ENST00000435505 FAM196BA6NMK8 535 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 NFKBIBQ15653 356 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 MKRN1Q9UHC7 482 aaKnown RBP7.94□□□□□ -1.14
VRK2-206ENST00000435505 LGR5O75473 907 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 ATP2B1P20020 1258 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 SOX11P35716 441 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
VRK2-206ENST00000435505 SMARCA2P51531 1590 aa7.94□□□□□ -1.14
VRK2-206ENST00000435505 HSP90AA1P07900 732 aaKnown RBP7.93□□□□□ -1.14
VRK2-206ENST00000435505 DNAJA1P31689 397 aaKnown RBP7.93□□□□□ -1.14
VRK2-206ENST00000435505 PRMT3O60678 531 aa7.93□□□□□ -1.14
VRK2-206ENST00000435505 P4HBP07237 508 aaKnown RBP7.93□□□□□ -1.14
VRK2-206ENST00000435505 SKIP12755 728 aa7.93□□□□□ -1.14
VRK2-206ENST00000435505 RASA1P20936 1047 aa7.93□□□□□ -1.14
VRK2-206ENST00000435505 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
VRK2-206ENST00000435505 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
VRK2-206ENST00000435505 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
VRK2-206ENST00000435505 CACNB1Q02641 598 aaPredicted RBP7.92□□□□□ -1.14
VRK2-206ENST00000435505 EAPPQ56P03 285 aaPredicted RBP7.92□□□□□ -1.14
VRK2-206ENST00000435505 MRPL42Q9Y6G3 142 aaKnown RBP7.92□□□□□ -1.14
VRK2-206ENST00000435505 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
VRK2-206ENST00000435505 KCNH2Q12809 1159 aa7.92□□□□□ -1.14
VRK2-206ENST00000435505 PRPF38BQ5VTL8 546 aaKnown RBP7.92□□□□□ -1.14
VRK2-206ENST00000435505 CAPN12Q6ZSI9 719 aa7.92□□□□□ -1.14
VRK2-206ENST00000435505 TMEM87AQ8NBN3 555 aa7.92□□□□□ -1.14
VRK2-206ENST00000435505 PPP1R18Q6NYC8 613 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 GLYCTKQ8IVS8 523 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 CHPF2Q9P2E5 772 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 FAN1Q9Y2M0 1017 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 AKNAQ7Z591 1439 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 RCCD1A6NED2 376 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 ICMTO60725 284 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 GJA5P36382 358 aa7.91□□□□□ -1.14
VRK2-206ENST00000435505 SCRIBQ14160 1630 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 PHF14O94880 888 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 FANCCQ00597 558 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 BMS1Q14692 1282 aaKnown RBP7.9□□□□□ -1.14
VRK2-206ENST00000435505 APBB1IPQ7Z5R6 666 aaPredicted RBP7.9□□□□□ -1.14
VRK2-206ENST00000435505 TEX2Q8IWB9 1127 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 TTC13Q8NBP0 860 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 SLAIN1Q8ND83 568 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 PMM1Q92871 262 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 ZNF594Q96JF6 807 aaPredicted RBP7.9□□□□□ -1.14
VRK2-206ENST00000435505 METTL14Q9HCE5 456 aaKnown RBP7.9□□□□□ -1.14
VRK2-206ENST00000435505 SEPT3Q9UH03 358 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 PRDM4Q9UKN5 801 aa7.9□□□□□ -1.14
VRK2-206ENST00000435505 DPYDQ12882 1025 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 NCOA4Q13772 614 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 PDCD7Q8N8D1 485 aaKnown RBP7.9□□□□□ -1.15
VRK2-206ENST00000435505 PRIMPOLQ96LW4 560 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 PRDM10Q9NQV6 1147 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 DCTN4Q9UJW0 460 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 WIZO95785 1651 aa7.9□□□□□ -1.15
VRK2-206ENST00000435505 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
VRK2-206ENST00000435505 C3orf80F5H4A9 247 aa7.89□□□□□ -1.15
VRK2-206ENST00000435505 G3BP2Q9UN86 482 aaKnown RBP7.89□□□□□ -1.15
VRK2-206ENST00000435505 RRBP1Q9P2E9 1410 aaKnown RBP7.89□□□□□ -1.15
VRK2-206ENST00000435505 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
VRK2-206ENST00000435505 RPUSD2Q8IZ73 545 aaKnown RBP7.89□□□□□ -1.15
VRK2-206ENST00000435505 SGSM3Q96HU1 749 aa7.89□□□□□ -1.15
VRK2-206ENST00000435505 KIF21BO75037 1637 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 FBXO45P0C2W1 286 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 FOXD4L6Q3SYB3 417 aaPredicted RBP7.88□□□□□ -1.15
VRK2-206ENST00000435505 FOXD4L3Q6VB84 417 aaPredicted RBP7.88□□□□□ -1.15
VRK2-206ENST00000435505 ANKMY2Q8IV38 441 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 RAB3GAP2Q9H2M9 1393 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 STAG1Q8WVM7 1258 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 TMEM121BQ9BXQ6 578 aaPredicted RBP7.88□□□□□ -1.15
VRK2-206ENST00000435505 FAM198AQ9UFP1 575 aa7.88□□□□□ -1.15
VRK2-206ENST00000435505 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
VRK2-206ENST00000435505 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 FDX1P10109 184 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 RGS3P49796 1198 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 EIF4G2P78344 907 aaKnown RBP eCLIP7.87□□□□□ -1.15
VRK2-206ENST00000435505 OCLNQ16625 522 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
VRK2-206ENST00000435505 EPAS1Q99814 870 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 ANAPC15P60006 121 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 CLDN10P78369 228 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 CALD1Q05682 793 aaKnown RBP7.87□□□□□ -1.15
VRK2-206ENST00000435505 FAM50AQ14320 339 aaKnown RBP7.87□□□□□ -1.15
VRK2-206ENST00000435505 CCDC184Q52MB2 194 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 PNNQ9H307 717 aaKnown RBP7.87□□□□□ -1.15
VRK2-206ENST00000435505 CCSER2Q9H7U1 834 aa7.87□□□□□ -1.15
VRK2-206ENST00000435505 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
VRK2-206ENST00000435505 GTF3C2Q8WUA4 911 aaPredicted RBP7.86□□□□□ -1.15
VRK2-206ENST00000435505 COL4A3BPQ9Y5P4 624 aa7.86□□□□□ -1.15
VRK2-206ENST00000435505 TTLL13PA6NNM8 815 aa7.86□□□□□ -1.15
VRK2-206ENST00000435505 HOXA2O43364 376 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms