RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 RGPD8O14715 1765 aaPredicted RBP30.52■■■□□ 2.48
MBD3-202ENST00000434436 MVPQ14764 893 aaKnown RBP30.5■■■□□ 2.47
MBD3-202ENST00000434436 DZIP1LQ8IYY4 767 aaKnown RBP30.5■■■□□ 2.47
MBD3-202ENST00000434436 CEP170BQ9Y4F5 1589 aaPredicted RBP30.49■■■□□ 2.47
MBD3-202ENST00000434436 THUMPD2Q9BTF0 503 aaKnown RBP30.48■■■□□ 2.47
MBD3-202ENST00000434436 TRIM27P14373 513 aa30.47■■■□□ 2.47
MBD3-202ENST00000434436 PEAK1Q9H792 1746 aa30.46■■■□□ 2.47
MBD3-202ENST00000434436 C8orf34Q49A92 452 aa30.46■■■□□ 2.47
MBD3-202ENST00000434436 PMFBP1Q8TBY8 1022 aa30.46■■■□□ 2.47
MBD3-202ENST00000434436 USP31Q70CQ4 1352 aa30.46■■■□□ 2.47
MBD3-202ENST00000434436 FAM161AQ3B820 660 aa30.46■■■□□ 2.47
MBD3-202ENST00000434436 FTSJ3Q8IY81 847 aaKnown RBP30.46■■■□□ 2.47
MBD3-202ENST00000434436 EIF4A2Q14240 407 aaKnown RBP30.45■■■□□ 2.47
MBD3-202ENST00000434436 RIMS1Q86UR5 1692 aaKnown RBP30.45■■■□□ 2.46
MBD3-202ENST00000434436 NOB1Q9ULX3 412 aaKnown RBP30.45■■■□□ 2.46
MBD3-202ENST00000434436 LAS1LQ9Y4W2 734 aaKnown RBP30.45■■■□□ 2.46
MBD3-202ENST00000434436 ATF7IPQ6VMQ6 1270 aa30.44■■■□□ 2.46
MBD3-202ENST00000434436 CALD1Q05682 793 aaKnown RBP30.42■■■□□ 2.46
MBD3-202ENST00000434436 ZBTB47Q9UFB7 747 aaPredicted RBP30.42■■■□□ 2.46
MBD3-202ENST00000434436 ALDH1L2Q3SY69 923 aa30.42■■■□□ 2.46
MBD3-202ENST00000434436 TTC21AQ8NDW8 1320 aa30.41■■■□□ 2.46
MBD3-202ENST00000434436 ZNF853P0CG23 659 aa30.41■■■□□ 2.46
MBD3-202ENST00000434436 KCNA6P17658 529 aa30.41■■■□□ 2.46
MBD3-202ENST00000434436 IFT57Q9NWB7 429 aa30.41■■■□□ 2.46
MBD3-202ENST00000434436 AEBP1Q8IUX7 1158 aa30.4■■■□□ 2.46
MBD3-202ENST00000434436 GNAI1P63096 354 aa30.39■■■□□ 2.46
MBD3-202ENST00000434436 PIK3R4Q99570 1358 aa30.38■■■□□ 2.45
MBD3-202ENST00000434436 RGPD1P0DJD0 1748 aa30.38■■■□□ 2.45
MBD3-202ENST00000434436 KIF16BQ96L93 1317 aa30.38■■■□□ 2.45
MBD3-202ENST00000434436 HSP90AB2PQ58FF8 381 aa30.38■■■□□ 2.45
MBD3-202ENST00000434436 LMOD3Q0VAK6 560 aa30.37■■■□□ 2.45
MBD3-202ENST00000434436 NGDNQ8NEJ9 315 aaKnown RBP30.37■■■□□ 2.45
MBD3-202ENST00000434436 SULT6B1Q6IMI4 303 aa30.37■■■□□ 2.45
MBD3-202ENST00000434436 ZNF428Q96B54 188 aa30.36■■■□□ 2.45
MBD3-202ENST00000434436 MBIPQ9NS73 344 aa30.36■■■□□ 2.45
MBD3-202ENST00000434436 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
MBD3-202ENST00000434436 VAMP4O75379 141 aa30.36■■■□□ 2.45
MBD3-202ENST00000434436 RWDD1Q9H446 243 aaPredicted RBP30.35■■■□□ 2.45
MBD3-202ENST00000434436 FMN2Q9NZ56 1722 aa30.35■■■□□ 2.45
MBD3-202ENST00000434436 ANKARQ7Z5J8 1434 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 SOX12O15370 315 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 BRPF1P55201 1214 aaPredicted RBP30.34■■■□□ 2.45
MBD3-202ENST00000434436 TMEM57Q8N5G2 664 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 TSPYL6Q8N831 410 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 DDX19BQ9UMR2 479 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 PIK3C2AO00443 1686 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 IPO8O15397 1037 aaKnown RBP30.34■■■□□ 2.45
MBD3-202ENST00000434436 ITPRIPQ8IWB1 547 aa30.34■■■□□ 2.45
MBD3-202ENST00000434436 VIRMAQ69YN4 1812 aaKnown RBP30.33■■■□□ 2.45
MBD3-202ENST00000434436 CFAP44Q96MT7 982 aa30.33■■■□□ 2.45
MBD3-202ENST00000434436 MAP3K19Q56UN5 1328 aa30.33■■■□□ 2.45
MBD3-202ENST00000434436 DCTN1Q14203 1278 aa30.32■■■□□ 2.44
MBD3-202ENST00000434436 CHD2O14647 1828 aaKnown RBP30.31■■■□□ 2.44
MBD3-202ENST00000434436 PDZRN3Q9UPQ7 1066 aa30.31■■■□□ 2.44
MBD3-202ENST00000434436 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
MBD3-202ENST00000434436 MRPL50Q8N5N7 158 aaKnown RBP30.29■■■□□ 2.44
MBD3-202ENST00000434436 ANKLE2Q86XL3 938 aa30.27■■■□□ 2.44
MBD3-202ENST00000434436 ADAMTSL3P82987 1691 aa30.27■■■□□ 2.44
MBD3-202ENST00000434436 SBNO1A3KN83 1393 aa30.27■■■□□ 2.44
MBD3-202ENST00000434436 ELL2O00472 640 aaPredicted RBP30.26■■■□□ 2.44
MBD3-202ENST00000434436 C8orf58Q8NAV2 365 aa30.26■■■□□ 2.44
MBD3-202ENST00000434436 ZBTB40Q9NUA8 1239 aa30.26■■■□□ 2.43
MBD3-202ENST00000434436 MARF1Q9Y4F3 1742 aaKnown RBP30.25■■■□□ 2.43
MBD3-202ENST00000434436 FLT4P35916 1363 aa30.25■■■□□ 2.43
MBD3-202ENST00000434436 TWISTNBQ3B726 338 aaPredicted RBP30.25■■■□□ 2.43
MBD3-202ENST00000434436 ARHGEF10O15013 1369 aa30.24■■■□□ 2.43
MBD3-202ENST00000434436 HDAC1Q13547 482 aaPredicted RBP30.24■■■□□ 2.43
MBD3-202ENST00000434436 ARHGAP45Q92619 1136 aa30.22■■■□□ 2.43
MBD3-202ENST00000434436 NLRP6P59044 892 aa30.21■■■□□ 2.43
MBD3-202ENST00000434436 DDRGK1Q96HY6 314 aa30.21■■■□□ 2.43
MBD3-202ENST00000434436 SETD1BQ9UPS6 1966 aaKnown RBP30.2■■■□□ 2.43
MBD3-202ENST00000434436 USP54Q70EL1 1684 aa30.2■■■□□ 2.43
MBD3-202ENST00000434436 AMPHP49418 695 aa30.18■■■□□ 2.42
MBD3-202ENST00000434436 MCM10Q7L590 875 aa30.18■■■□□ 2.42
MBD3-202ENST00000434436 KDRP35968 1356 aa30.16■■■□□ 2.42
MBD3-202ENST00000434436 NUTM2GQ5VZR2 741 aa30.16■■■□□ 2.42
MBD3-202ENST00000434436 CHL1O00533 1208 aa30.16■■■□□ 2.42
MBD3-202ENST00000434436 RBM33Q96EV2 1170 aaKnown RBP30.15■■■□□ 2.42
MBD3-202ENST00000434436 IGSF1Q8N6C5 1336 aa30.15■■■□□ 2.42
MBD3-202ENST00000434436 EYA1Q99502 592 aa30.15■■■□□ 2.42
MBD3-202ENST00000434436 SMC5Q8IY18 1101 aa30.14■■■□□ 2.42
MBD3-202ENST00000434436 ABCC4O15439 1325 aa30.13■■■□□ 2.41
MBD3-202ENST00000434436 USP19O94966 1318 aa30.13■■■□□ 2.41
MBD3-202ENST00000434436 ZBTB7BO15156 539 aaPredicted RBP30.13■■■□□ 2.41
MBD3-202ENST00000434436 SEC24BO95487 1268 aa30.13■■■□□ 2.41
MBD3-202ENST00000434436 CRB1P82279 1406 aa30.13■■■□□ 2.41
MBD3-202ENST00000434436 MTHFSDQ2M296 383 aaKnown RBP30.12■■■□□ 2.41
MBD3-202ENST00000434436 ABTB2Q8N961 1025 aa30.12■■■□□ 2.41
MBD3-202ENST00000434436 PHF8Q9UPP1 1060 aa30.12■■■□□ 2.41
MBD3-202ENST00000434436 FOXO3O43524 673 aa30.12■■■□□ 2.41
MBD3-202ENST00000434436 KRT24Q2M2I5 525 aa30.11■■■□□ 2.41
MBD3-202ENST00000434436 HOXC9P31274 260 aa30.1■■■□□ 2.41
MBD3-202ENST00000434436 KIF24Q5T7B8 1368 aa30.1■■■□□ 2.41
MBD3-202ENST00000434436 NBR1Q14596 966 aa30.08■■■□□ 2.41
MBD3-202ENST00000434436 ADGRL3Q9HAR2 1447 aa30.08■■■□□ 2.41
MBD3-202ENST00000434436 KIAA0232Q92628 1395 aa30.08■■■□□ 2.41
MBD3-202ENST00000434436 API5Q9BZZ5 524 aaKnown RBP30.07■■■□□ 2.4
MBD3-202ENST00000434436 NWD1Q149M9 1564 aa30.07■■■□□ 2.4
MBD3-202ENST00000434436 NPHP4O75161 1426 aaPredicted RBP30.06■■■□□ 2.4
MBD3-202ENST00000434436 CHMP4BQ9H444 224 aaKnown RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms