RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
SNHG20-202ENST00000434411 CHRM1P11229 460 aaPredicted RBP15.89■□□□□ 0.13
SNHG20-202ENST00000434411 ADRA2BP18089 450 aa15.89■□□□□ 0.13
SNHG20-202ENST00000434411 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
SNHG20-202ENST00000434411 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
SNHG20-202ENST00000434411 BBXQ8WY36 941 aaPredicted RBP15.89■□□□□ 0.13
SNHG20-202ENST00000434411 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
SNHG20-202ENST00000434411 RBM6P78332 1123 aaKnown RBP15.88■□□□□ 0.13
SNHG20-202ENST00000434411 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
SNHG20-202ENST00000434411 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
SNHG20-202ENST00000434411 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
SNHG20-202ENST00000434411 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
SNHG20-202ENST00000434411 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
SNHG20-202ENST00000434411 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
SNHG20-202ENST00000434411 TEX2Q8IWB9 1127 aa15.87■□□□□ 0.13
SNHG20-202ENST00000434411 INSRP06213 1382 aa15.87■□□□□ 0.13
SNHG20-202ENST00000434411 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
SNHG20-202ENST00000434411 CABLES1Q8TDN4 633 aa15.86■□□□□ 0.13
SNHG20-202ENST00000434411 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 IGSF3O75054 1194 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
SNHG20-202ENST00000434411 ACEP12821 1306 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 SECISBP2LQ93073 1101 aaKnown RBP15.85■□□□□ 0.13
SNHG20-202ENST00000434411 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 NWD2Q9ULI1 1742 aa15.85■□□□□ 0.13
SNHG20-202ENST00000434411 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
SNHG20-202ENST00000434411 PPIP5K1Q6PFW1 1433 aa15.84■□□□□ 0.13
SNHG20-202ENST00000434411 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
SNHG20-202ENST00000434411 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
SNHG20-202ENST00000434411 NUDCQ9Y266 331 aa15.83■□□□□ 0.13
SNHG20-202ENST00000434411 BCL9LQ86UU0 1499 aa15.83■□□□□ 0.12
SNHG20-202ENST00000434411 CRYBG1Q9Y4K1 1723 aa15.83■□□□□ 0.12
SNHG20-202ENST00000434411 ATRNO75882 1429 aa15.82■□□□□ 0.12
SNHG20-202ENST00000434411 SLIT2O94813 1529 aa15.82■□□□□ 0.12
SNHG20-202ENST00000434411 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
SNHG20-202ENST00000434411 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
SNHG20-202ENST00000434411 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
SNHG20-202ENST00000434411 CABP1Q9NZU7 370 aa15.79■□□□□ 0.12
SNHG20-202ENST00000434411 RGS12O14924 1447 aa15.79■□□□□ 0.12
SNHG20-202ENST00000434411 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
SNHG20-202ENST00000434411 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
SNHG20-202ENST00000434411 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
SNHG20-202ENST00000434411 AKAP12Q02952 1782 aa15.77■□□□□ 0.12
SNHG20-202ENST00000434411 FAM83GA6ND36 823 aa15.77■□□□□ 0.11
SNHG20-202ENST00000434411 PDE3BQ13370 1112 aa15.77■□□□□ 0.11
SNHG20-202ENST00000434411 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.11
SNHG20-202ENST00000434411 BLMP54132 1417 aaPredicted RBP15.76■□□□□ 0.11
SNHG20-202ENST00000434411 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
SNHG20-202ENST00000434411 NRAPQ86VF7 1730 aa15.75■□□□□ 0.11
SNHG20-202ENST00000434411 NUTM2GQ5VZR2 741 aa15.75■□□□□ 0.11
SNHG20-202ENST00000434411 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
SNHG20-202ENST00000434411 CNPY4Q8N129 248 aa15.75■□□□□ 0.11
SNHG20-202ENST00000434411 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
SNHG20-202ENST00000434411 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
SNHG20-202ENST00000434411 USP6P35125 1406 aa15.75■□□□□ 0.11
SNHG20-202ENST00000434411 VPS72Q15906 364 aa15.74■□□□□ 0.11
SNHG20-202ENST00000434411 PRDM4Q9UKN5 801 aa15.74■□□□□ 0.11
SNHG20-202ENST00000434411 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
SNHG20-202ENST00000434411 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
SNHG20-202ENST00000434411 BTG4Q9NY30 223 aa15.74■□□□□ 0.11
SNHG20-202ENST00000434411 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
SNHG20-202ENST00000434411 GLI3P10071 1580 aa15.74■□□□□ 0.11
SNHG20-202ENST00000434411 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNHG20-202ENST00000434411 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNHG20-202ENST00000434411 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
SNHG20-202ENST00000434411 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.11
SNHG20-202ENST00000434411 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
SNHG20-202ENST00000434411 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.11
SNHG20-202ENST00000434411 BRPF3Q9ULD4 1205 aa15.71■□□□□ 0.11
SNHG20-202ENST00000434411 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.1
SNHG20-202ENST00000434411 KIAA0232Q92628 1395 aa15.71■□□□□ 0.1
SNHG20-202ENST00000434411 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
SNHG20-202ENST00000434411 NLRP6P59044 892 aa15.7■□□□□ 0.1
SNHG20-202ENST00000434411 PIK3C2AO00443 1686 aa15.69■□□□□ 0.1
SNHG20-202ENST00000434411 USP19O94966 1318 aa15.69■□□□□ 0.1
SNHG20-202ENST00000434411 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
SNHG20-202ENST00000434411 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
SNHG20-202ENST00000434411 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
SNHG20-202ENST00000434411 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
SNHG20-202ENST00000434411 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
SNHG20-202ENST00000434411 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
SNHG20-202ENST00000434411 GCP02774 474 aa15.68■□□□□ 0.1
SNHG20-202ENST00000434411 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
SNHG20-202ENST00000434411 KCNG1Q9UIX4 513 aa15.68■□□□□ 0.1
SNHG20-202ENST00000434411 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
SNHG20-202ENST00000434411 TTC21BQ7Z4L5 1316 aa15.67■□□□□ 0.1
SNHG20-202ENST00000434411 CPDO75976 1380 aa15.67■□□□□ 0.1
SNHG20-202ENST00000434411 HDGFL2Q7Z4V5 671 aaPredicted RBP15.67■□□□□ 0.1
SNHG20-202ENST00000434411 ONECUT3O60422 494 aaPredicted RBP15.66■□□□□ 0.1
SNHG20-202ENST00000434411 NSD3Q9BZ95 1437 aa15.66■□□□□ 0.1
SNHG20-202ENST00000434411 SLIT3O75094 1523 aa15.66■□□□□ 0.1
SNHG20-202ENST00000434411 EVA1CP58658 441 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 PRDM10Q9NQV6 1147 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 NSD2O96028 1365 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 A0A0G2JS52 829 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 TERF2IPQ9NYB0 399 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 LMO7Q8WWI1 1683 aa15.65■□□□□ 0.1
SNHG20-202ENST00000434411 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms