RNA–Protein interactions for RNA: ENST00000433927.1

ELL3-202, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 5

Gene ELL3, Length 792 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-202ENST00000433927 DDB1Q16531 1140 aa28.83■■■□□ 2.21
ELL3-202ENST00000433927 CDCA7Q9BWT1 371 aaPredicted RBP28.82■■■□□ 2.2
ELL3-202ENST00000433927 TONSLQ96HA7 1378 aa28.82■■■□□ 2.2
ELL3-202ENST00000433927 OVOS2A0A0G2JMS6 1433 aa28.82■■■□□ 2.2
ELL3-202ENST00000433927 OVOS2A0A0J9YW53 1432 aa28.82■■■□□ 2.2
ELL3-202ENST00000433927 OVOS2Q6IE36 1432 aa28.82■■■□□ 2.2
ELL3-202ENST00000433927 NBPF14Q5TI25 921 aa28.81■■■□□ 2.2
ELL3-202ENST00000433927 CSB-PGBD3P0DP91 1061 aa28.8■■■□□ 2.2
ELL3-202ENST00000433927 RREB1Q92766 1687 aa28.8■■■□□ 2.2
ELL3-202ENST00000433927 MON2Q7Z3U7 1717 aa28.79■■■□□ 2.2
ELL3-202ENST00000433927 RGPD5Q99666 1765 aa28.78■■■□□ 2.2
ELL3-202ENST00000433927 LRRC37A3O60309 1634 aa28.78■■■□□ 2.2
ELL3-202ENST00000433927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.77■■■□□ 2.2
ELL3-202ENST00000433927 TMC1Q8TDI8 760 aa28.77■■■□□ 2.2
ELL3-202ENST00000433927 CARD10Q9BWT7 1032 aa28.77■■■□□ 2.2
ELL3-202ENST00000433927 NFAT5O94916 1531 aa28.76■■■□□ 2.19
ELL3-202ENST00000433927 PEAK1Q9H792 1746 aa28.76■■■□□ 2.19
ELL3-202ENST00000433927 WNK3Q9BYP7 1800 aa28.76■■■□□ 2.19
ELL3-202ENST00000433927 NUP188Q5SRE5 1749 aa28.75■■■□□ 2.19
ELL3-202ENST00000433927 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
ELL3-202ENST00000433927 USP31Q70CQ4 1352 aa28.74■■■□□ 2.19
ELL3-202ENST00000433927 ABCC6O95255 1503 aa28.74■■■□□ 2.19
ELL3-202ENST00000433927 SBF2Q86WG5 1849 aa28.73■■■□□ 2.19
ELL3-202ENST00000433927 CCDC7Q96M83 1385 aa28.71■■■□□ 2.19
ELL3-202ENST00000433927 PLSCR1O15162 318 aa28.7■■■□□ 2.18
ELL3-202ENST00000433927 PUS7Q96PZ0 661 aaKnown RBP28.7■■■□□ 2.18
ELL3-202ENST00000433927 BCL11BQ9C0K0 894 aaPredicted RBP28.7■■■□□ 2.18
ELL3-202ENST00000433927 SLC12A5Q9H2X9 1139 aa28.7■■■□□ 2.18
ELL3-202ENST00000433927 TERF2IPQ9NYB0 399 aa28.7■■■□□ 2.18
ELL3-202ENST00000433927 CD163L1Q9NR16 1453 aa28.7■■■□□ 2.18
ELL3-202ENST00000433927 EXOC5O00471 708 aa28.69■■■□□ 2.18
ELL3-202ENST00000433927 NME9Q86XW9 330 aa28.69■■■□□ 2.18
ELL3-202ENST00000433927 MARCH10Q8NA82 808 aaPredicted RBP28.69■■■□□ 2.18
ELL3-202ENST00000433927 RGPD3A6NKT7 1758 aaPredicted RBP28.68■■■□□ 2.18
ELL3-202ENST00000433927 RGPD4Q7Z3J3 1758 aa28.68■■■□□ 2.18
ELL3-202ENST00000433927 USP54Q70EL1 1684 aa28.68■■■□□ 2.18
ELL3-202ENST00000433927 BCL9O00512 1426 aa28.68■■■□□ 2.18
ELL3-202ENST00000433927 EDC4Q6P2E9 1401 aaKnown RBP28.67■■■□□ 2.18
ELL3-202ENST00000433927 SLC24A1O60721 1099 aa28.64■■■□□ 2.18
ELL3-202ENST00000433927 LTN1O94822 1766 aa28.63■■■□□ 2.17
ELL3-202ENST00000433927 ERBB3P21860 1342 aa28.63■■■□□ 2.17
ELL3-202ENST00000433927 A0A1W2PP64 1363 aa28.62■■■□□ 2.17
ELL3-202ENST00000433927 NLRP2Q9NX02 1062 aa28.61■■■□□ 2.17
ELL3-202ENST00000433927 PTF1AQ7RTS3 328 aa28.6■■■□□ 2.17
ELL3-202ENST00000433927 NINLQ9Y2I6 1382 aa28.6■■■□□ 2.17
ELL3-202ENST00000433927 ST20-MTHFSA0A0A6YYL1 179 aa28.59■■■□□ 2.17
ELL3-202ENST00000433927 TNS2Q63HR2 1409 aa28.59■■■□□ 2.17
ELL3-202ENST00000433927 TESK2Q96S53 571 aa28.58■■■□□ 2.17
ELL3-202ENST00000433927 SPON1Q9HCB6 807 aa28.58■■■□□ 2.17
ELL3-202ENST00000433927 ANKRD24Q8TF21 1146 aa28.57■■■□□ 2.16
ELL3-202ENST00000433927 KCNQ2O43526 872 aa28.55■■■□□ 2.16
ELL3-202ENST00000433927 IL2RBP14784 551 aa28.55■■■□□ 2.16
ELL3-202ENST00000433927 TRIM26Q12899 539 aaPredicted RBP28.55■■■□□ 2.16
ELL3-202ENST00000433927 PPP1R1BQ9UD71 204 aaPredicted RBP28.54■■■□□ 2.16
ELL3-202ENST00000433927 PROM2Q8N271 834 aa28.53■■■□□ 2.16
ELL3-202ENST00000433927 ANO8Q9HCE9 1232 aaPredicted RBP28.52■■■□□ 2.16
ELL3-202ENST00000433927 TXNRD1Q16881 649 aa28.51■■■□□ 2.15
ELL3-202ENST00000433927 IP6K1Q92551 441 aa28.51■■■□□ 2.15
ELL3-202ENST00000433927 COG3Q96JB2 828 aa28.51■■■□□ 2.15
ELL3-202ENST00000433927 NHSQ6T4R5 1651 aa28.48■■■□□ 2.15
ELL3-202ENST00000433927 ACSBG1Q96GR2 724 aa28.47■■■□□ 2.15
ELL3-202ENST00000433927 STK32BQ9NY57 414 aa28.47■■■□□ 2.15
ELL3-202ENST00000433927 KAT6BQ8WYB5 2073 aa28.47■■■□□ 2.15
ELL3-202ENST00000433927 TMF1P82094 1093 aa28.46■■■□□ 2.15
ELL3-202ENST00000433927 FAM208AQ9UK61 1670 aaKnown RBP28.45■■■□□ 2.15
ELL3-202ENST00000433927 LTV1Q96GA3 475 aaPredicted RBP28.45■■■□□ 2.14
ELL3-202ENST00000433927 ANKRD36BQ8N2N9 1353 aa28.45■■■□□ 2.14
ELL3-202ENST00000433927 CASZ1Q86V15 1759 aa28.44■■■□□ 2.14
ELL3-202ENST00000433927 USP47Q96K76 1375 aa28.42■■■□□ 2.14
ELL3-202ENST00000433927 AMPHP49418 695 aa28.42■■■□□ 2.14
ELL3-202ENST00000433927 SLC15A2Q16348 729 aa28.42■■■□□ 2.14
ELL3-202ENST00000433927 MAP3K19Q56UN5 1328 aa28.42■■■□□ 2.14
ELL3-202ENST00000433927 DCAF8L1A6NGE4 600 aa28.4■■■□□ 2.14
ELL3-202ENST00000433927 HOXC9P31274 260 aa28.4■■■□□ 2.14
ELL3-202ENST00000433927 CDCA8Q53HL2 280 aa28.39■■■□□ 2.14
ELL3-202ENST00000433927 PDGFDQ9GZP0 370 aaPredicted RBP28.39■■■□□ 2.14
ELL3-202ENST00000433927 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
ELL3-202ENST00000433927 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
ELL3-202ENST00000433927 BTAF1O14981 1849 aa28.38■■■□□ 2.13
ELL3-202ENST00000433927 FBLN1P23142 703 aa28.36■■■□□ 2.13
ELL3-202ENST00000433927 FYB1O15117 783 aa28.34■■■□□ 2.13
ELL3-202ENST00000433927 RTL1A6NKG5 1358 aa28.34■■■□□ 2.13
ELL3-202ENST00000433927 GGNBP2Q9H3C7 697 aa28.33■■■□□ 2.13
ELL3-202ENST00000433927 ATF5Q9Y2D1 282 aaPredicted RBP28.33■■■□□ 2.13
ELL3-202ENST00000433927 RRS1Q15050 365 aaKnown RBP28.31■■■□□ 2.12
ELL3-202ENST00000433927 MTFR1LQ9H019 292 aa28.31■■■□□ 2.12
ELL3-202ENST00000433927 PTGER2P43116 358 aa28.3■■■□□ 2.12
ELL3-202ENST00000433927 RGPD2P0DJD1 1756 aa28.29■■■□□ 2.12
ELL3-202ENST00000433927 ZCRB1Q8TBF4 217 aaKnown RBP28.29■■■□□ 2.12
ELL3-202ENST00000433927 TIMELESSQ9UNS1 1208 aa28.29■■■□□ 2.12
ELL3-202ENST00000433927 SMG6Q86US8 1419 aaKnown RBP28.28■■■□□ 2.12
ELL3-202ENST00000433927 PAPPAQ13219 1627 aa28.28■■■□□ 2.12
ELL3-202ENST00000433927 YY1P25490 414 aa28.27■■■□□ 2.12
ELL3-202ENST00000433927 SLC27A3Q5K4L6 730 aa28.27■■■□□ 2.12
ELL3-202ENST00000433927 SYTL4Q96C24 671 aaPredicted RBP28.27■■■□□ 2.12
ELL3-202ENST00000433927 MYOM1P52179 1685 aa28.26■■■□□ 2.12
ELL3-202ENST00000433927 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
ELL3-202ENST00000433927 CGNL1Q0VF96 1302 aa28.25■■■□□ 2.11
ELL3-202ENST00000433927 PRIM1P49642 420 aaKnown RBP28.25■■■□□ 2.11
ELL3-202ENST00000433927 NBPF6Q5VWK0 638 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms