RNA–Protein interactions for RNA: ENST00000429174.6

DYSF-211, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-211ENST00000429174 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
DYSF-211ENST00000429174 EIF3JO75822 258 aaKnown RBP18.5■□□□□ 0.55
DYSF-211ENST00000429174 KRT85P78386 507 aa18.5■□□□□ 0.55
DYSF-211ENST00000429174 STIM1Q13586 685 aa18.5■□□□□ 0.55
DYSF-211ENST00000429174 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
DYSF-211ENST00000429174 SYCE3A1L190 88 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 ZNF644Q9H582 1327 aaPredicted RBP18.49■□□□□ 0.55
DYSF-211ENST00000429174 ERLIN1O75477 346 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 SSR1P43307 286 aaKnown RBP18.49■□□□□ 0.55
DYSF-211ENST00000429174 KIAA1328Q86T90 577 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 DACH1Q9UI36 760 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 DDX11Q96FC9 970 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
DYSF-211ENST00000429174 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
DYSF-211ENST00000429174 PPP1R1BQ9UD71 204 aaPredicted RBP18.49■□□□□ 0.55
DYSF-211ENST00000429174 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
DYSF-211ENST00000429174 MATR3P43243 847 aaKnown RBP eCLIP18.48■□□□□ 0.55
DYSF-211ENST00000429174 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
DYSF-211ENST00000429174 ATF3P18847 181 aa18.48■□□□□ 0.55
DYSF-211ENST00000429174 JMYQ8N9B5 988 aa18.48■□□□□ 0.55
DYSF-211ENST00000429174 TRERF1Q96PN7 1200 aa18.48■□□□□ 0.55
DYSF-211ENST00000429174 PDRG1Q9NUG6 133 aa18.48■□□□□ 0.55
DYSF-211ENST00000429174 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
DYSF-211ENST00000429174 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
DYSF-211ENST00000429174 TRIM22Q8IYM9 498 aa18.47■□□□□ 0.55
DYSF-211ENST00000429174 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
DYSF-211ENST00000429174 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
DYSF-211ENST00000429174 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
DYSF-211ENST00000429174 CBFA2T2O43439 604 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 CCDC113Q9H0I3 377 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 AACSQ86V21 672 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
DYSF-211ENST00000429174 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
DYSF-211ENST00000429174 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
DYSF-211ENST00000429174 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
DYSF-211ENST00000429174 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
DYSF-211ENST00000429174 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
DYSF-211ENST00000429174 GBP2P32456 591 aaPredicted RBP18.45■□□□□ 0.54
DYSF-211ENST00000429174 AAMPQ13685 434 aa18.45■□□□□ 0.54
DYSF-211ENST00000429174 IL1RAPL2Q9NP60 686 aa18.45■□□□□ 0.54
DYSF-211ENST00000429174 RBM5P52756 815 aaKnown RBP eCLIP18.45■□□□□ 0.54
DYSF-211ENST00000429174 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
DYSF-211ENST00000429174 LUC7LQ9NQ29 371 aaKnown RBP18.45■□□□□ 0.54
DYSF-211ENST00000429174 DNA2P51530 1060 aa18.44■□□□□ 0.54
DYSF-211ENST00000429174 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
DYSF-211ENST00000429174 SKAP1Q86WV1 359 aa18.44■□□□□ 0.54
DYSF-211ENST00000429174 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
DYSF-211ENST00000429174 CCDC85AQ96PX6 553 aaPredicted RBP18.44■□□□□ 0.54
DYSF-211ENST00000429174 ESPNB1AK53 854 aa18.43■□□□□ 0.54
DYSF-211ENST00000429174 GOLGA6L10A0A0M3HER8 536 aa18.43■□□□□ 0.54
DYSF-211ENST00000429174 EPB41L2O43491 1005 aaKnown RBP18.43■□□□□ 0.54
DYSF-211ENST00000429174 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
DYSF-211ENST00000429174 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
DYSF-211ENST00000429174 CFAP100Q494V2 611 aa18.43■□□□□ 0.54
DYSF-211ENST00000429174 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
DYSF-211ENST00000429174 DDX54Q8TDD1 881 aaKnown RBP18.42■□□□□ 0.54
DYSF-211ENST00000429174 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
DYSF-211ENST00000429174 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 MCM4P33991 863 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 CEP57L1Q8IYX8 460 aa18.42■□□□□ 0.54
DYSF-211ENST00000429174 USP5P45974 858 aa18.41■□□□□ 0.54
DYSF-211ENST00000429174 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
DYSF-211ENST00000429174 POLR3GO15318 223 aaPredicted RBP18.41■□□□□ 0.54
DYSF-211ENST00000429174 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
DYSF-211ENST00000429174 CYB5RLQ6IPT4 315 aa18.41■□□□□ 0.54
DYSF-211ENST00000429174 DHX8Q14562 1220 aaKnown RBP18.4■□□□□ 0.54
DYSF-211ENST00000429174 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
DYSF-211ENST00000429174 BCCIPQ9P287 314 aaKnown RBP eCLIP18.4■□□□□ 0.54
DYSF-211ENST00000429174 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
DYSF-211ENST00000429174 TDO2P48775 406 aa18.4■□□□□ 0.54
DYSF-211ENST00000429174 GNL3LQ9NVN8 582 aaKnown RBP18.4■□□□□ 0.54
DYSF-211ENST00000429174 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.54
DYSF-211ENST00000429174 DYDC1Q8WWB3 177 aa18.39■□□□□ 0.54
DYSF-211ENST00000429174 GOPCQ9HD26 462 aa18.39■□□□□ 0.54
DYSF-211ENST00000429174 EZRP15311 586 aaKnown RBP18.39■□□□□ 0.53
DYSF-211ENST00000429174 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
DYSF-211ENST00000429174 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
DYSF-211ENST00000429174 KLHL10Q6JEL2 608 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 UBXN4Q92575 508 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 NACAP1Q9BZK3 213 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 CCDC97Q96F63 343 aaPredicted RBP18.39■□□□□ 0.53
DYSF-211ENST00000429174 CASQ1P31415 396 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 MAP2K1Q02750 393 aaPredicted RBP18.39■□□□□ 0.53
DYSF-211ENST00000429174 IQCEQ6IPM2 695 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
DYSF-211ENST00000429174 TMCO3Q6UWJ1 677 aa18.38■□□□□ 0.53
DYSF-211ENST00000429174 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
DYSF-211ENST00000429174 TAF4BQ92750 862 aa18.38■□□□□ 0.53
DYSF-211ENST00000429174 SMARCA5O60264 1052 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms