RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 SPATA31A1Q5TZJ5 1347 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 IP6K1Q92551 441 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 NFAT5O94916 1531 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
KDM3A-204ENST00000427678 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 PLCH1Q4KWH8 1693 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 A0A0G2JS52 829 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 MYT1Q01538 1121 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
KDM3A-204ENST00000427678 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.4■□□□□ 0.86
KDM3A-204ENST00000427678 WDR17Q8IZU2 1322 aa20.39■□□□□ 0.85
KDM3A-204ENST00000427678 PER1O15534 1290 aaPredicted RBP20.39■□□□□ 0.85
KDM3A-204ENST00000427678 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
KDM3A-204ENST00000427678 COL5A2P05997 1499 aaPredicted RBP20.38■□□□□ 0.85
KDM3A-204ENST00000427678 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 RGS12O14924 1447 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 NSD2O96028 1365 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 HOXC9P31274 260 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
KDM3A-204ENST00000427678 CRB1P82279 1406 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
KDM3A-204ENST00000427678 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
KDM3A-204ENST00000427678 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
KDM3A-204ENST00000427678 GLI3P10071 1580 aa20.34■□□□□ 0.85
KDM3A-204ENST00000427678 ERBB3P21860 1342 aa20.34■□□□□ 0.85
KDM3A-204ENST00000427678 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 LTV1Q96GA3 475 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 NRAPQ86VF7 1730 aa20.33■□□□□ 0.85
KDM3A-204ENST00000427678 ABCC6O95255 1503 aa20.33■□□□□ 0.85
KDM3A-204ENST00000427678 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
KDM3A-204ENST00000427678 COL18A1P39060 1754 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
KDM3A-204ENST00000427678 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
KDM3A-204ENST00000427678 CC2D1BQ5T0F9 858 aaKnown RBP20.31■□□□□ 0.84
KDM3A-204ENST00000427678 FLT4P35916 1363 aa20.3■□□□□ 0.84
KDM3A-204ENST00000427678 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
KDM3A-204ENST00000427678 KIF20BQ96Q89 1820 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 INSRP06213 1382 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
KDM3A-204ENST00000427678 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
KDM3A-204ENST00000427678 SMG6Q86US8 1419 aaKnown RBP20.25■□□□□ 0.83
KDM3A-204ENST00000427678 EXOC5O00471 708 aa20.24■□□□□ 0.83
KDM3A-204ENST00000427678 DDB1Q16531 1140 aa20.24■□□□□ 0.83
KDM3A-204ENST00000427678 LTN1O94822 1766 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 IL2RBP14784 551 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
KDM3A-204ENST00000427678 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
KDM3A-204ENST00000427678 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
KDM3A-204ENST00000427678 MTHFSP49914 203 aa20.2■□□□□ 0.82
KDM3A-204ENST00000427678 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
KDM3A-204ENST00000427678 RGPD5Q99666 1765 aa20.19■□□□□ 0.82
KDM3A-204ENST00000427678 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
KDM3A-204ENST00000427678 THSD7AQ9UPZ6 1657 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
KDM3A-204ENST00000427678 EYA1Q99502 592 aa20.16■□□□□ 0.82
KDM3A-204ENST00000427678 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
KDM3A-204ENST00000427678 ANKRD26Q9UPS8 1709 aa20.15■□□□□ 0.82
KDM3A-204ENST00000427678 PEAK1Q9H792 1746 aa20.14■□□□□ 0.81
KDM3A-204ENST00000427678 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.81
KDM3A-204ENST00000427678 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
KDM3A-204ENST00000427678 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
KDM3A-204ENST00000427678 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
KDM3A-204ENST00000427678 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 IL13P35225 146 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
KDM3A-204ENST00000427678 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
KDM3A-204ENST00000427678 TRIM37O94972 964 aa20.1■□□□□ 0.81
KDM3A-204ENST00000427678 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
KDM3A-204ENST00000427678 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
KDM3A-204ENST00000427678 RALBP1Q15311 655 aa20.08■□□□□ 0.81
KDM3A-204ENST00000427678 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
KDM3A-204ENST00000427678 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
KDM3A-204ENST00000427678 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
KDM3A-204ENST00000427678 TNS2Q63HR2 1409 aa20.07■□□□□ 0.8
KDM3A-204ENST00000427678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.81e-10■■□□□ 12.4
KDM3A-204ENST00000427678 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
KDM3A-204ENST00000427678 BCL9O00512 1426 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 SULT6B1Q6IMI4 303 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 MEGF6O75095 1541 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms