RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 PAK3O75914 559 aaPredicted RBP23.89■■□□□ 1.42
AC055811.2-201ENST00000427497 COL3A1P02461 1466 aaPredicted RBP23.89■■□□□ 1.42
AC055811.2-201ENST00000427497 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
AC055811.2-201ENST00000427497 AATKQ6ZMQ8 1374 aa23.87■■□□□ 1.41
AC055811.2-201ENST00000427497 TTC21AQ8NDW8 1320 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 ZRANB1Q9UGI0 708 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 OVOS2A0A0J9YW53 1432 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 OVOS2Q6IE36 1432 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 COG3Q96JB2 828 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 EP400Q96L91 3159 aa23.86■■□□□ 1.41
AC055811.2-201ENST00000427497 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
AC055811.2-201ENST00000427497 COL14A1Q05707 1796 aaKnown RBP23.85■■□□□ 1.41
AC055811.2-201ENST00000427497 VPS72Q15906 364 aa23.85■■□□□ 1.41
AC055811.2-201ENST00000427497 NRAPQ86VF7 1730 aa23.84■■□□□ 1.41
AC055811.2-201ENST00000427497 SENP3-EIF4A1A0A087X0R7 540 aa23.83■■□□□ 1.4
AC055811.2-201ENST00000427497 POLKQ9UBT6 870 aa23.83■■□□□ 1.4
AC055811.2-201ENST00000427497 PHRF1Q9P1Y6 1649 aaKnown RBP23.82■■□□□ 1.4
AC055811.2-201ENST00000427497 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
AC055811.2-201ENST00000427497 PIK3C2AO00443 1686 aa23.81■■□□□ 1.4
AC055811.2-201ENST00000427497 USP54Q70EL1 1684 aa23.8■■□□□ 1.4
AC055811.2-201ENST00000427497 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
AC055811.2-201ENST00000427497 BTG4Q9NY30 223 aa23.79■■□□□ 1.4
AC055811.2-201ENST00000427497 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
AC055811.2-201ENST00000427497 FBLN1P23142 703 aa23.78■■□□□ 1.4
AC055811.2-201ENST00000427497 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
AC055811.2-201ENST00000427497 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
AC055811.2-201ENST00000427497 CCDC146Q8IYE0 955 aa23.76■■□□□ 1.39
AC055811.2-201ENST00000427497 ONECUT3O60422 494 aaPredicted RBP23.76■■□□□ 1.39
AC055811.2-201ENST00000427497 PRDM11Q9NQV5 511 aa23.76■■□□□ 1.39
AC055811.2-201ENST00000427497 NUDCQ9Y266 331 aa23.76■■□□□ 1.39
AC055811.2-201ENST00000427497 SEPT12Q8IYM1 358 aa23.75■■□□□ 1.39
AC055811.2-201ENST00000427497 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
AC055811.2-201ENST00000427497 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
AC055811.2-201ENST00000427497 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
AC055811.2-201ENST00000427497 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
AC055811.2-201ENST00000427497 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
AC055811.2-201ENST00000427497 ABTB2Q8N961 1025 aa23.74■■□□□ 1.39
AC055811.2-201ENST00000427497 ZNF521Q96K83 1311 aa23.73■■□□□ 1.39
AC055811.2-201ENST00000427497 APAF1O14727 1248 aa23.73■■□□□ 1.39
AC055811.2-201ENST00000427497 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
AC055811.2-201ENST00000427497 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
AC055811.2-201ENST00000427497 ZC3H6P61129 1189 aaKnown RBP23.71■■□□□ 1.39
AC055811.2-201ENST00000427497 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
AC055811.2-201ENST00000427497 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.39
AC055811.2-201ENST00000427497 CCDC125Q86Z20 511 aa23.7■■□□□ 1.39
AC055811.2-201ENST00000427497 USP19O94966 1318 aa23.7■■□□□ 1.38
AC055811.2-201ENST00000427497 CHRNA2Q15822 529 aa23.7■■□□□ 1.38
AC055811.2-201ENST00000427497 PPM1GO15355 546 aaPredicted RBP23.69■■□□□ 1.38
AC055811.2-201ENST00000427497 SPATA31A5Q5VU36 1347 aa23.69■■□□□ 1.38
AC055811.2-201ENST00000427497 SPATA31A7Q8IWB4 1347 aa23.69■■□□□ 1.38
AC055811.2-201ENST00000427497 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
AC055811.2-201ENST00000427497 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
AC055811.2-201ENST00000427497 U2SURPO15042 1029 aaKnown RBP23.67■■□□□ 1.38
AC055811.2-201ENST00000427497 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
AC055811.2-201ENST00000427497 CPDO75976 1380 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 A0A0G2JS52 829 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 IL13P35225 146 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 NLRP6P59044 892 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 MYT1Q01538 1121 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 KRT27Q7Z3Y8 459 aa23.66■■□□□ 1.38
AC055811.2-201ENST00000427497 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
AC055811.2-201ENST00000427497 PLEKHF1Q96S99 279 aa23.65■■□□□ 1.38
AC055811.2-201ENST00000427497 GCP02774 474 aa23.64■■□□□ 1.38
AC055811.2-201ENST00000427497 TCP11L2Q8N4U5 519 aa23.64■■□□□ 1.38
AC055811.2-201ENST00000427497 STRN4Q9NRL3 753 aa23.64■■□□□ 1.37
AC055811.2-201ENST00000427497 LMO7Q8WWI1 1683 aa23.63■■□□□ 1.37
AC055811.2-201ENST00000427497 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
AC055811.2-201ENST00000427497 CAMTA1Q9Y6Y1 1673 aa23.62■■□□□ 1.37
AC055811.2-201ENST00000427497 FCHSD2O94868 740 aa23.62■■□□□ 1.37
AC055811.2-201ENST00000427497 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
AC055811.2-201ENST00000427497 SPATA31A1Q5TZJ5 1347 aa23.61■■□□□ 1.37
AC055811.2-201ENST00000427497 SLIT3O75094 1523 aa23.61■■□□□ 1.37
AC055811.2-201ENST00000427497 GOLGA2Q08379 1002 aa23.6■■□□□ 1.37
AC055811.2-201ENST00000427497 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
AC055811.2-201ENST00000427497 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
AC055811.2-201ENST00000427497 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
AC055811.2-201ENST00000427497 EVA1CP58658 441 aa23.59■■□□□ 1.37
AC055811.2-201ENST00000427497 RSPH6AQ9H0K4 717 aa23.59■■□□□ 1.37
AC055811.2-201ENST00000427497 FLT4P35916 1363 aa23.58■■□□□ 1.37
AC055811.2-201ENST00000427497 NEFLP07196 543 aa23.58■■□□□ 1.37
AC055811.2-201ENST00000427497 WWC1Q8IX03 1113 aa23.58■■□□□ 1.37
AC055811.2-201ENST00000427497 RGPD1P0DJD0 1748 aa23.58■■□□□ 1.37
AC055811.2-201ENST00000427497 TRMT2AQ8IZ69 625 aaKnown RBP23.57■■□□□ 1.36
AC055811.2-201ENST00000427497 NFAT5O94916 1531 aa23.57■■□□□ 1.36
AC055811.2-201ENST00000427497 SOX12O15370 315 aa23.57■■□□□ 1.36
AC055811.2-201ENST00000427497 SLFN5Q08AF3 891 aa23.57■■□□□ 1.36
AC055811.2-201ENST00000427497 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
AC055811.2-201ENST00000427497 RNF123Q5XPI4 1314 aa23.56■■□□□ 1.36
AC055811.2-201ENST00000427497 SF3B2Q13435 895 aaKnown RBP23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 FKBP8Q14318 412 aa23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 LARP1Q6PKG0 1096 aaKnown RBP23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 RRP7AQ9Y3A4 280 aaKnown RBP23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
AC055811.2-201ENST00000427497 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
AC055811.2-201ENST00000427497 COL5A2P05997 1499 aaPredicted RBP23.54■■□□□ 1.36
AC055811.2-201ENST00000427497 LTN1O94822 1766 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms