RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 PPP2R5EQ16537 467 aa3.01□□□□□ -1.93
NEB-209ENST00000427231 FBXW7Q969H0 707 aa3.01□□□□□ -1.93
NEB-209ENST00000427231 ZNF622Q969S3 477 aaKnown RBP eCLIP3.01□□□□□ -1.93
NEB-209ENST00000427231 CCDC171Q6TFL3 1326 aa3□□□□□ -1.93
NEB-209ENST00000427231 CCDC172P0C7W6 258 aa3□□□□□ -1.93
NEB-209ENST00000427231 POTEB2H3BUK9 544 aa3□□□□□ -1.93
NEB-209ENST00000427231 FCHSD2O94868 740 aa3□□□□□ -1.93
NEB-209ENST00000427231 CCDC173Q0VFZ6 552 aa3□□□□□ -1.93
NEB-209ENST00000427231 ALDH1L2Q3SY69 923 aa3□□□□□ -1.93
NEB-209ENST00000427231 KCTD17Q8N5Z5 321 aa3□□□□□ -1.93
NEB-209ENST00000427231 CNKSR2Q8WXI2 1034 aa3□□□□□ -1.93
NEB-209ENST00000427231 LRRCC1Q9C099 1032 aa3□□□□□ -1.93
NEB-209ENST00000427231 ECM2O94769 699 aaPredicted RBP3□□□□□ -1.93
NEB-209ENST00000427231 RAD50Q92878 1312 aa3□□□□□ -1.93
NEB-209ENST00000427231 RAB11FIP3O75154 756 aa3□□□□□ -1.93
NEB-209ENST00000427231 MNAT1P51948 309 aa3□□□□□ -1.93
NEB-209ENST00000427231 TRDNQ13061 729 aa3□□□□□ -1.93
NEB-209ENST00000427231 BRMS1Q9HCU9 246 aa3□□□□□ -1.93
NEB-209ENST00000427231 NEFHP12036 1026 aa3□□□□□ -1.93
NEB-209ENST00000427231 JAKMIP3Q5VZ66 844 aa3□□□□□ -1.93
NEB-209ENST00000427231 SYNE3Q6ZMZ3 975 aa3□□□□□ -1.93
NEB-209ENST00000427231 WASF1Q92558 559 aa3□□□□□ -1.93
NEB-209ENST00000427231 NOC3LQ8WTT2 800 aaKnown RBP3□□□□□ -1.93
NEB-209ENST00000427231 GRPEL1Q9HAV7 217 aa3□□□□□ -1.93
NEB-209ENST00000427231 USP25Q9UHP3 1055 aa3□□□□□ -1.93
NEB-209ENST00000427231 IL16Q14005 1332 aa3□□□□□ -1.93
NEB-209ENST00000427231 PRPF40AO75400 957 aaKnown RBP3□□□□□ -1.93
NEB-209ENST00000427231 MCTP1Q6DN14 999 aa3□□□□□ -1.93
NEB-209ENST00000427231 ZSCAN31Q96LW9 406 aaPredicted RBP3□□□□□ -1.93
NEB-209ENST00000427231 MRVI1Q9Y6F6 885 aa3□□□□□ -1.93
NEB-209ENST00000427231 CDKL5O76039 1030 aa3□□□□□ -1.93
NEB-209ENST00000427231 KCNH5Q8NCM2 988 aa3□□□□□ -1.93
NEB-209ENST00000427231 CNGA1P29973 690 aa3□□□□□ -1.93
NEB-209ENST00000427231 PCSK2P16519 638 aa3□□□□□ -1.93
NEB-209ENST00000427231 PHAXQ9H814 394 aaKnown RBP3□□□□□ -1.93
NEB-209ENST00000427231 VIMP08670 466 aaKnown RBP3□□□□□ -1.93
NEB-209ENST00000427231 ERCC6Q03468 1493 aa3□□□□□ -1.93
NEB-209ENST00000427231 DMTNQ08495 405 aa3□□□□□ -1.93
NEB-209ENST00000427231 IRX5P78411 483 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 SSR1P43307 286 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 ILF2Q12905 390 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 ARMC9Q7Z3E5 817 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 CTNNA3Q9UI47 895 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 ATAD2Q6PL18 1390 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 RCAN3Q9UKA8 241 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 NOL8Q76FK4 1167 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 TEX13AQ9BXU3 409 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 NASPP49321 788 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 PSMD2Q13200 908 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 TMCO5BA8MYB1 307 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 GRIPAP1Q4V328 841 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 RASSF4Q9H2L5 321 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 CEP131Q9UPN4 1083 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 APOBRQ0VD83 1088 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 INTS3Q68E01 1043 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 ZSCAN25Q6NSZ9 544 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 POLD1P28340 1107 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 PPARDQ03181 441 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 CEBPZQ03701 1054 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 PPP1R1BQ9UD71 204 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 RNF123Q5XPI4 1314 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 GNAI3P08754 354 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 MECOMQ03112 1051 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 PPP1R2P3Q6NXS1 205 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 PAIP2Q9BPZ3 127 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 EVC2Q86UK5 1308 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 PLCB1Q9NQ66 1216 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 TPD52L1Q16890 204 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 RPAP2Q8IXW5 612 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 SH2B1Q9NRF2 756 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 FHOD3Q2V2M9 1422 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 SLC3A2P08195 630 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 MYCBPQ99417 103 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 ATRXP46100 2492 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 EHBP1Q8NDI1 1231 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 BRD4O60885 1362 aaPredicted RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 DNAJC21Q5F1R6 531 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 USP37Q86T82 979 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 HSP90B2PQ58FF3 399 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 DYDC1Q8WWB3 177 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 GNAI1P63096 354 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 CEP89Q96ST8 783 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 TPCN1Q9ULQ1 816 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 FRMD3A2A2Y4 597 aa2.99□□□□□ -1.93
NEB-209ENST00000427231 SAFBQ15424 915 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEB-209ENST00000427231 DZIP1LQ8IYY4 767 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 PCP11498 1178 aaKnown RBP2.99□□□□□ -1.93
NEB-209ENST00000427231 MYBBP1AQ9BQG0 1328 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 GOLGA6L19H0YKK7 550 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 CCDC146Q8IYE0 955 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 HOXC6P09630 235 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 NUTM2GQ5VZR2 741 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 MRFAP1L1Q96HT8 127 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 KIF15Q9NS87 1388 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 C17orf53Q8N3J3 647 aaPredicted RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 GOLGA6CA6NDK9 693 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 GOLGA6BA6NDN3 693 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 GOLGA6DP0CG33 693 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 TNPO1Q92973 898 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 GOLGA6AQ9NYA3 693 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms