RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CRACR2AQ9BSW2 395 aa17.01■□□□□ 0.31
PTPN13-203ENST00000427191 FHOD3Q2V2M9 1422 aa17.01■□□□□ 0.31
PTPN13-203ENST00000427191 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
PTPN13-203ENST00000427191 NEK4P51957 841 aa17■□□□□ 0.31
PTPN13-203ENST00000427191 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
PTPN13-203ENST00000427191 ZSCAN12O43309 604 aa17■□□□□ 0.31
PTPN13-203ENST00000427191 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-203ENST00000427191 TAX1BP1Q86VP1 789 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
PTPN13-203ENST00000427191 GNAI2P04899 355 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 ME1P48163 572 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
PTPN13-203ENST00000427191 FOSBP53539 338 aa16.99■□□□□ 0.31
PTPN13-203ENST00000427191 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
PTPN13-203ENST00000427191 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
PTPN13-203ENST00000427191 GCOM1H8Y6P7 765 aaPredicted RBP16.98■□□□□ 0.31
PTPN13-203ENST00000427191 MYZAPP0CAP1 466 aa16.98■□□□□ 0.31
PTPN13-203ENST00000427191 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
PTPN13-203ENST00000427191 CENPHQ9H3R5 247 aa16.98■□□□□ 0.31
PTPN13-203ENST00000427191 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
PTPN13-203ENST00000427191 FIBPO43427 364 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 UQCRHLA0A096LP55 91 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 UQCRHP07919 91 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
PTPN13-203ENST00000427191 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPN13-203ENST00000427191 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
PTPN13-203ENST00000427191 ANKRD18BA2A2Z9 1011 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 ARHGAP29Q52LW3 1261 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 UBXN4Q92575 508 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
PTPN13-203ENST00000427191 SOGA3Q5TF21 947 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 KIAA1328Q86T90 577 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 SKIDA1Q1XH10 827 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 TMCO3Q6UWJ1 677 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 TANGO6Q9C0B7 1094 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 FGFR1OPO95684 399 aaKnown RBP16.96■□□□□ 0.31
PTPN13-203ENST00000427191 GRPEL1Q9HAV7 217 aa16.96■□□□□ 0.31
PTPN13-203ENST00000427191 DDX12PQ92771 950 aa16.95■□□□□ 0.3
PTPN13-203ENST00000427191 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
PTPN13-203ENST00000427191 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
PTPN13-203ENST00000427191 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
PTPN13-203ENST00000427191 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
PTPN13-203ENST00000427191 NEBLO76041 1014 aa16.95■□□□□ 0.3
PTPN13-203ENST00000427191 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-203ENST00000427191 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-203ENST00000427191 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
PTPN13-203ENST00000427191 LUZP1Q86V48 1076 aa16.94■□□□□ 0.3
PTPN13-203ENST00000427191 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
PTPN13-203ENST00000427191 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
PTPN13-203ENST00000427191 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
PTPN13-203ENST00000427191 TAOK3Q9H2K8 898 aa16.94■□□□□ 0.3
PTPN13-203ENST00000427191 FYB1O15117 783 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 NEMFO60524 1076 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 NUP62CLQ9H1M0 184 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
PTPN13-203ENST00000427191 SPATA32Q96LK8 384 aa16.93■□□□□ 0.3
PTPN13-203ENST00000427191 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-203ENST00000427191 KIF21BO75037 1637 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 WIZO95785 1651 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
PTPN13-203ENST00000427191 GIGYF2Q6Y7W6 1299 aaKnown RBP16.92■□□□□ 0.3
PTPN13-203ENST00000427191 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 SPA17Q15506 151 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-203ENST00000427191 KIF5CO60282 957 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 FILIP1Q7Z7B0 1213 aa16.92■□□□□ 0.3
PTPN13-203ENST00000427191 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
PTPN13-203ENST00000427191 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
PTPN13-203ENST00000427191 ATF3P18847 181 aa16.91■□□□□ 0.3
PTPN13-203ENST00000427191 PLEKHH2Q8IVE3 1493 aa16.91■□□□□ 0.3
PTPN13-203ENST00000427191 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
PTPN13-203ENST00000427191 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
PTPN13-203ENST00000427191 CEP63Q96MT8 703 aa16.9■□□□□ 0.3
PTPN13-203ENST00000427191 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN13-203ENST00000427191 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
PTPN13-203ENST00000427191 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
PTPN13-203ENST00000427191 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
PTPN13-203ENST00000427191 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
PTPN13-203ENST00000427191 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
PTPN13-203ENST00000427191 ANAPC15P60006 121 aa16.89■□□□□ 0.3
PTPN13-203ENST00000427191 NECTIN2Q92692 538 aa16.89■□□□□ 0.3
PTPN13-203ENST00000427191 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 KIF20AO95235 890 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 ZSCAN30Q86W11 494 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 CTAGE5O15320 804 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 TNIP1Q15025 636 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 FKBP15Q5T1M5 1219 aa16.89■□□□□ 0.29
PTPN13-203ENST00000427191 CAVIN2O95810 425 aa16.88■□□□□ 0.29
PTPN13-203ENST00000427191 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
PTPN13-203ENST00000427191 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
PTPN13-203ENST00000427191 ESPNB1AK53 854 aa16.88■□□□□ 0.29
PTPN13-203ENST00000427191 SPECC1LQ69YQ0 1117 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms