RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SEPT12Q8IYM1 358 aa31■■■□□ 2.55
PTCHD3P2-201ENST00000424937 SPATA31A1Q5TZJ5 1347 aa30.99■■■□□ 2.55
PTCHD3P2-201ENST00000424937 LARP1Q6PKG0 1096 aaKnown RBP30.98■■■□□ 2.55
PTCHD3P2-201ENST00000424937 NSD3Q9BZ95 1437 aa30.98■■■□□ 2.55
PTCHD3P2-201ENST00000424937 ONECUT3O60422 494 aaPredicted RBP30.96■■■□□ 2.55
PTCHD3P2-201ENST00000424937 COG3Q96JB2 828 aa30.96■■■□□ 2.55
PTCHD3P2-201ENST00000424937 USP35Q9P2H5 1018 aa30.96■■■□□ 2.55
PTCHD3P2-201ENST00000424937 UPF1Q92900 1129 aaKnown RBP eCLIP30.95■■■□□ 2.55
PTCHD3P2-201ENST00000424937 WNK3Q9BYP7 1800 aa30.95■■■□□ 2.55
PTCHD3P2-201ENST00000424937 AXIN2Q9Y2T1 843 aa30.94■■■□□ 2.54
PTCHD3P2-201ENST00000424937 CRB1P82279 1406 aa30.93■■■□□ 2.54
PTCHD3P2-201ENST00000424937 CARD14Q9BXL6 1004 aa30.92■■■□□ 2.54
PTCHD3P2-201ENST00000424937 GGNBP2Q9H3C7 697 aa30.92■■■□□ 2.54
PTCHD3P2-201ENST00000424937 FYB1O15117 783 aa30.91■■■□□ 2.54
PTCHD3P2-201ENST00000424937 C11orf95C9JLR9 678 aaPredicted RBP30.9■■■□□ 2.54
PTCHD3P2-201ENST00000424937 ANKRD26Q9UPS8 1709 aa30.89■■■□□ 2.54
PTCHD3P2-201ENST00000424937 EP400Q96L91 3159 aa30.89■■■□□ 2.53
PTCHD3P2-201ENST00000424937 WDR17Q8IZU2 1322 aa30.88■■■□□ 2.53
PTCHD3P2-201ENST00000424937 PARP4Q9UKK3 1724 aaKnown RBP30.87■■■□□ 2.53
PTCHD3P2-201ENST00000424937 KRT27Q7Z3Y8 459 aa30.87■■■□□ 2.53
PTCHD3P2-201ENST00000424937 TCP11L2Q8N4U5 519 aa30.87■■■□□ 2.53
PTCHD3P2-201ENST00000424937 TOM1L2Q6ZVM7 507 aa30.86■■■□□ 2.53
PTCHD3P2-201ENST00000424937 CSB-PGBD3P0DP91 1061 aa30.85■■■□□ 2.53
PTCHD3P2-201ENST00000424937 BARGINQ6ZT62 677 aa30.85■■■□□ 2.53
PTCHD3P2-201ENST00000424937 THRAP3Q9Y2W1 955 aaKnown RBP30.83■■■□□ 2.53
PTCHD3P2-201ENST00000424937 FAM208AQ9UK61 1670 aaKnown RBP30.83■■■□□ 2.53
PTCHD3P2-201ENST00000424937 KIF7Q2M1P5 1343 aa30.82■■■□□ 2.52
PTCHD3P2-201ENST00000424937 BLMP54132 1417 aaPredicted RBP30.81■■■□□ 2.52
PTCHD3P2-201ENST00000424937 LRRC37A3O60309 1634 aa30.81■■■□□ 2.52
PTCHD3P2-201ENST00000424937 CGNL1Q0VF96 1302 aa30.81■■■□□ 2.52
PTCHD3P2-201ENST00000424937 MAP3K19Q56UN5 1328 aa30.81■■■□□ 2.52
PTCHD3P2-201ENST00000424937 FBLN1P23142 703 aa30.81■■■□□ 2.52
PTCHD3P2-201ENST00000424937 ERBB3P21860 1342 aa30.8■■■□□ 2.52
PTCHD3P2-201ENST00000424937 PANK3Q9H999 370 aa30.79■■■□□ 2.52
PTCHD3P2-201ENST00000424937 RGPD2P0DJD1 1756 aa30.77■■■□□ 2.52
PTCHD3P2-201ENST00000424937 IP6K1Q92551 441 aa30.77■■■□□ 2.52
PTCHD3P2-201ENST00000424937 PEAK1Q9H792 1746 aa30.77■■■□□ 2.52
PTCHD3P2-201ENST00000424937 MAP2P11137 1827 aaKnown RBP30.77■■■□□ 2.52
PTCHD3P2-201ENST00000424937 AMPHP49418 695 aa30.76■■■□□ 2.51
PTCHD3P2-201ENST00000424937 RRS1Q15050 365 aaKnown RBP30.76■■■□□ 2.51
PTCHD3P2-201ENST00000424937 ANKRD24Q8TF21 1146 aa30.76■■■□□ 2.51
PTCHD3P2-201ENST00000424937 CARD10Q9BWT7 1032 aa30.76■■■□□ 2.51
PTCHD3P2-201ENST00000424937 RTL1A6NKG5 1358 aa30.76■■■□□ 2.51
PTCHD3P2-201ENST00000424937 RGPD1P0DJD0 1748 aa30.74■■■□□ 2.51
PTCHD3P2-201ENST00000424937 HOXC9P31274 260 aa30.74■■■□□ 2.51
PTCHD3P2-201ENST00000424937 FAM182BQ5T319 152 aa30.74■■■□□ 2.51
PTCHD3P2-201ENST00000424937 CCDC7Q96M83 1385 aa30.74■■■□□ 2.51
PTCHD3P2-201ENST00000424937 NLRP2Q9NX02 1062 aa30.72■■■□□ 2.51
PTCHD3P2-201ENST00000424937 LTV1Q96GA3 475 aaPredicted RBP30.71■■■□□ 2.51
PTCHD3P2-201ENST00000424937 PDE3BQ13370 1112 aa30.7■■■□□ 2.51
PTCHD3P2-201ENST00000424937 DISP2A7MBM2 1401 aa30.7■■■□□ 2.5
PTCHD3P2-201ENST00000424937 TNS1Q9HBL0 1735 aaKnown RBP30.69■■■□□ 2.5
PTCHD3P2-201ENST00000424937 CCDC125Q86Z20 511 aa30.68■■■□□ 2.5
PTCHD3P2-201ENST00000424937 NSD2O96028 1365 aa30.66■■■□□ 2.5
PTCHD3P2-201ENST00000424937 FLT4P35916 1363 aa30.66■■■□□ 2.5
PTCHD3P2-201ENST00000424937 CDCA7Q9BWT1 371 aaPredicted RBP30.66■■■□□ 2.5
PTCHD3P2-201ENST00000424937 WASHC2AQ641Q2 1341 aa30.66■■■□□ 2.5
PTCHD3P2-201ENST00000424937 DDB1Q16531 1140 aa30.65■■■□□ 2.5
PTCHD3P2-201ENST00000424937 KIF24Q5T7B8 1368 aa30.65■■■□□ 2.5
PTCHD3P2-201ENST00000424937 KNSTRNQ9Y448 316 aa30.64■■■□□ 2.5
PTCHD3P2-201ENST00000424937 EMILIN1Q9Y6C2 1016 aa30.64■■■□□ 2.5
PTCHD3P2-201ENST00000424937 SMG6Q86US8 1419 aaKnown RBP30.64■■■□□ 2.49
PTCHD3P2-201ENST00000424937 SF3B2Q13435 895 aaKnown RBP30.63■■■□□ 2.49
PTCHD3P2-201ENST00000424937 SBF2Q86WG5 1849 aa30.63■■■□□ 2.49
PTCHD3P2-201ENST00000424937 FAM196AQ6ZSG2 479 aa30.62■■■□□ 2.49
PTCHD3P2-201ENST00000424937 TNS2Q63HR2 1409 aa30.62■■■□□ 2.49
PTCHD3P2-201ENST00000424937 TNNT2P45379 298 aaPredicted RBP30.61■■■□□ 2.49
PTCHD3P2-201ENST00000424937 INSRP06213 1382 aa30.61■■■□□ 2.49
PTCHD3P2-201ENST00000424937 OVOS2A0A0G2JMS6 1433 aa30.6■■■□□ 2.49
PTCHD3P2-201ENST00000424937 PPM1GO15355 546 aaPredicted RBP30.59■■■□□ 2.49
PTCHD3P2-201ENST00000424937 HSP90AB2PQ58FF8 381 aa30.59■■■□□ 2.49
PTCHD3P2-201ENST00000424937 IL2RBP14784 551 aa30.58■■■□□ 2.49
PTCHD3P2-201ENST00000424937 DEFB132Q7Z7B7 95 aa30.55■■■□□ 2.48
PTCHD3P2-201ENST00000424937 MORC1Q86VD1 984 aa30.55■■■□□ 2.48
PTCHD3P2-201ENST00000424937 EXOC5O00471 708 aa30.54■■■□□ 2.48
PTCHD3P2-201ENST00000424937 TRIM37O94972 964 aa30.54■■■□□ 2.48
PTCHD3P2-201ENST00000424937 AMER1Q5JTC6 1135 aaPredicted RBP30.54■■■□□ 2.48
PTCHD3P2-201ENST00000424937 POLKQ9UBT6 870 aa30.54■■■□□ 2.48
PTCHD3P2-201ENST00000424937 MARCH10Q8NA82 808 aaPredicted RBP30.52■■■□□ 2.48
PTCHD3P2-201ENST00000424937 SHANK3Q9BYB0 1731 aa30.52■■■□□ 2.48
PTCHD3P2-201ENST00000424937 BAG6P46379 1132 aa30.51■■■□□ 2.47
PTCHD3P2-201ENST00000424937 NBPF6Q5VWK0 638 aa30.51■■■□□ 2.47
PTCHD3P2-201ENST00000424937 USHBP1Q8N6Y0 703 aa30.51■■■□□ 2.47
PTCHD3P2-201ENST00000424937 NBPF4Q96M43 638 aa30.51■■■□□ 2.47
PTCHD3P2-201ENST00000424937 MEGF6O75095 1541 aa30.5■■■□□ 2.47
PTCHD3P2-201ENST00000424937 PER1O15534 1290 aaPredicted RBP30.49■■■□□ 2.47
PTCHD3P2-201ENST00000424937 KAT6BQ8WYB5 2073 aa30.48■■■□□ 2.47
PTCHD3P2-201ENST00000424937 BCL9O00512 1426 aa30.45■■■□□ 2.46
PTCHD3P2-201ENST00000424937 NHSQ6T4R5 1651 aa30.44■■■□□ 2.46
PTCHD3P2-201ENST00000424937 CC2D1BQ5T0F9 858 aaKnown RBP30.44■■■□□ 2.46
PTCHD3P2-201ENST00000424937 EN1Q05925 392 aaPredicted RBP30.43■■■□□ 2.46
PTCHD3P2-201ENST00000424937 APBA3O96018 575 aa30.42■■■□□ 2.46
PTCHD3P2-201ENST00000424937 NCAPD2Q15021 1401 aa30.41■■■□□ 2.46
PTCHD3P2-201ENST00000424937 RAPGEF4Q8WZA2 1011 aa30.41■■■□□ 2.46
PTCHD3P2-201ENST00000424937 RREB1Q92766 1687 aa30.41■■■□□ 2.46
PTCHD3P2-201ENST00000424937 RGPD3A6NKT7 1758 aaPredicted RBP30.41■■■□□ 2.46
PTCHD3P2-201ENST00000424937 RGPD4Q7Z3J3 1758 aa30.41■■■□□ 2.46
PTCHD3P2-201ENST00000424937 PKD1L3Q7Z443 1732 aa30.4■■■□□ 2.46
PTCHD3P2-201ENST00000424937 CNGB1Q14028 1251 aaPredicted RBP30.4■■■□□ 2.46
PTCHD3P2-201ENST00000424937 NPC1L1Q9UHC9 1359 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms