RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
SBDSP1-202ENST00000423945 USP35Q9P2H5 1018 aa24.99■■□□□ 1.59
SBDSP1-202ENST00000423945 LTN1O94822 1766 aa24.98■■□□□ 1.59
SBDSP1-202ENST00000423945 BARGINQ6ZT62 677 aa24.98■■□□□ 1.59
SBDSP1-202ENST00000423945 CRB1P82279 1406 aa24.97■■□□□ 1.59
SBDSP1-202ENST00000423945 ABCC6O95255 1503 aa24.96■■□□□ 1.59
SBDSP1-202ENST00000423945 FAM182BQ5T319 152 aa24.95■■□□□ 1.58
SBDSP1-202ENST00000423945 TCP11L2Q8N4U5 519 aa24.95■■□□□ 1.58
SBDSP1-202ENST00000423945 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.58
SBDSP1-202ENST00000423945 WNK3Q9BYP7 1800 aa24.94■■□□□ 1.58
SBDSP1-202ENST00000423945 CCDC125Q86Z20 511 aa24.94■■□□□ 1.58
SBDSP1-202ENST00000423945 PARP4Q9UKK3 1724 aaKnown RBP24.94■■□□□ 1.58
SBDSP1-202ENST00000423945 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
SBDSP1-202ENST00000423945 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
SBDSP1-202ENST00000423945 HSPA5P11021 654 aaKnown RBP24.92■■□□□ 1.58
SBDSP1-202ENST00000423945 THRAP3Q9Y2W1 955 aaKnown RBP24.92■■□□□ 1.58
SBDSP1-202ENST00000423945 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
SBDSP1-202ENST00000423945 KIF20BQ96Q89 1820 aa24.89■■□□□ 1.57
SBDSP1-202ENST00000423945 LRRC37A3O60309 1634 aa24.88■■□□□ 1.57
SBDSP1-202ENST00000423945 TOM1L2Q6ZVM7 507 aa24.88■■□□□ 1.57
SBDSP1-202ENST00000423945 CARD14Q9BXL6 1004 aa24.88■■□□□ 1.57
SBDSP1-202ENST00000423945 FYB1O15117 783 aa24.87■■□□□ 1.57
SBDSP1-202ENST00000423945 DEFB132Q7Z7B7 95 aa24.87■■□□□ 1.57
SBDSP1-202ENST00000423945 RGPD1P0DJD0 1748 aa24.86■■□□□ 1.57
SBDSP1-202ENST00000423945 TNS1Q9HBL0 1735 aaKnown RBP24.86■■□□□ 1.57
SBDSP1-202ENST00000423945 FBLN1P23142 703 aa24.86■■□□□ 1.57
SBDSP1-202ENST00000423945 COG3Q96JB2 828 aa24.85■■□□□ 1.57
SBDSP1-202ENST00000423945 CARD10Q9BWT7 1032 aa24.84■■□□□ 1.57
SBDSP1-202ENST00000423945 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
SBDSP1-202ENST00000423945 DISP2A7MBM2 1401 aa24.84■■□□□ 1.57
SBDSP1-202ENST00000423945 ERBB3P21860 1342 aa24.84■■□□□ 1.57
SBDSP1-202ENST00000423945 PEAK1Q9H792 1746 aa24.83■■□□□ 1.57
SBDSP1-202ENST00000423945 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
SBDSP1-202ENST00000423945 NSD3Q9BZ95 1437 aa24.82■■□□□ 1.56
SBDSP1-202ENST00000423945 PDE3BQ13370 1112 aa24.81■■□□□ 1.56
SBDSP1-202ENST00000423945 MAP3K19Q56UN5 1328 aa24.81■■□□□ 1.56
SBDSP1-202ENST00000423945 IP6K1Q92551 441 aa24.8■■□□□ 1.56
SBDSP1-202ENST00000423945 C11orf95C9JLR9 678 aaPredicted RBP24.79■■□□□ 1.56
SBDSP1-202ENST00000423945 SF3B2Q13435 895 aaKnown RBP24.79■■□□□ 1.56
SBDSP1-202ENST00000423945 FAM196AQ6ZSG2 479 aa24.79■■□□□ 1.56
SBDSP1-202ENST00000423945 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
SBDSP1-202ENST00000423945 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
SBDSP1-202ENST00000423945 POLR3GLQ9BT43 218 aa24.76■■□□□ 1.55
SBDSP1-202ENST00000423945 SBF2Q86WG5 1849 aa24.76■■□□□ 1.55
SBDSP1-202ENST00000423945 FAM208AQ9UK61 1670 aaKnown RBP24.75■■□□□ 1.55
SBDSP1-202ENST00000423945 RGPD2P0DJD1 1756 aa24.75■■□□□ 1.55
SBDSP1-202ENST00000423945 TRIM37O94972 964 aa24.75■■□□□ 1.55
SBDSP1-202ENST00000423945 HOXC9P31274 260 aa24.75■■□□□ 1.55
SBDSP1-202ENST00000423945 DDB1Q16531 1140 aa24.75■■□□□ 1.55
SBDSP1-202ENST00000423945 RRS1Q15050 365 aaKnown RBP24.74■■□□□ 1.55
SBDSP1-202ENST00000423945 CDCA7Q9BWT1 371 aaPredicted RBP24.74■■□□□ 1.55
SBDSP1-202ENST00000423945 NLRP2Q9NX02 1062 aa24.74■■□□□ 1.55
SBDSP1-202ENST00000423945 BAG6P46379 1132 aa24.73■■□□□ 1.55
SBDSP1-202ENST00000423945 OVOS2A0A0G2JMS6 1433 aa24.72■■□□□ 1.55
SBDSP1-202ENST00000423945 EN1Q05925 392 aaPredicted RBP24.72■■□□□ 1.55
SBDSP1-202ENST00000423945 MARCH10Q8NA82 808 aaPredicted RBP24.72■■□□□ 1.55
SBDSP1-202ENST00000423945 RTL1A6NKG5 1358 aa24.71■■□□□ 1.55
SBDSP1-202ENST00000423945 AMPHP49418 695 aa24.71■■□□□ 1.55
SBDSP1-202ENST00000423945 LTV1Q96GA3 475 aaPredicted RBP24.71■■□□□ 1.55
SBDSP1-202ENST00000423945 ANKRD26Q9UPS8 1709 aa24.7■■□□□ 1.54
SBDSP1-202ENST00000423945 SRCAPQ6ZRS2 3230 aa24.7■■□□□ 1.54
SBDSP1-202ENST00000423945 TNS2Q63HR2 1409 aa24.69■■□□□ 1.54
SBDSP1-202ENST00000423945 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
SBDSP1-202ENST00000423945 CAMKK2Q96RR4 588 aa24.67■■□□□ 1.54
SBDSP1-202ENST00000423945 PANK3Q9H999 370 aa24.67■■□□□ 1.54
SBDSP1-202ENST00000423945 BCL9O00512 1426 aa24.67■■□□□ 1.54
SBDSP1-202ENST00000423945 MAP2P11137 1827 aaKnown RBP24.66■■□□□ 1.54
SBDSP1-202ENST00000423945 EXOC5O00471 708 aa24.66■■□□□ 1.54
SBDSP1-202ENST00000423945 IL2RBP14784 551 aa24.66■■□□□ 1.54
SBDSP1-202ENST00000423945 EZH2Q15910 746 aaKnown RBP24.66■■□□□ 1.54
SBDSP1-202ENST00000423945 RREB1Q92766 1687 aa24.66■■□□□ 1.54
SBDSP1-202ENST00000423945 APBA3O96018 575 aa24.65■■□□□ 1.54
SBDSP1-202ENST00000423945 PTF1AQ7RTS3 328 aa24.65■■□□□ 1.54
SBDSP1-202ENST00000423945 KIF7Q2M1P5 1343 aa24.64■■□□□ 1.54
SBDSP1-202ENST00000423945 HSP90AB2PQ58FF8 381 aa24.64■■□□□ 1.54
SBDSP1-202ENST00000423945 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.54
SBDSP1-202ENST00000423945 INSRP06213 1382 aa24.63■■□□□ 1.53
SBDSP1-202ENST00000423945 FLT4P35916 1363 aa24.63■■□□□ 1.53
SBDSP1-202ENST00000423945 KIF24Q5T7B8 1368 aa24.63■■□□□ 1.53
SBDSP1-202ENST00000423945 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
SBDSP1-202ENST00000423945 NBPF6Q5VWK0 638 aa24.61■■□□□ 1.53
SBDSP1-202ENST00000423945 NBPF4Q96M43 638 aa24.61■■□□□ 1.53
SBDSP1-202ENST00000423945 NUP188Q5SRE5 1749 aa24.61■■□□□ 1.53
SBDSP1-202ENST00000423945 MEGF6O75095 1541 aa24.6■■□□□ 1.53
SBDSP1-202ENST00000423945 RGPD3A6NKT7 1758 aaPredicted RBP24.59■■□□□ 1.53
SBDSP1-202ENST00000423945 RGPD4Q7Z3J3 1758 aa24.59■■□□□ 1.53
SBDSP1-202ENST00000423945 PARD3Q8TEW0 1356 aa24.58■■□□□ 1.53
SBDSP1-202ENST00000423945 NHSQ6T4R5 1651 aa24.58■■□□□ 1.53
SBDSP1-202ENST00000423945 USHBP1Q8N6Y0 703 aa24.57■■□□□ 1.52
SBDSP1-202ENST00000423945 BCL11BQ9C0K0 894 aaPredicted RBP24.57■■□□□ 1.52
SBDSP1-202ENST00000423945 POLKQ9UBT6 870 aa24.57■■□□□ 1.52
SBDSP1-202ENST00000423945 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
SBDSP1-202ENST00000423945 PSDA5PKW4 1024 aaPredicted RBP24.54■■□□□ 1.52
SBDSP1-202ENST00000423945 KCNQ2O43526 872 aa24.54■■□□□ 1.52
SBDSP1-202ENST00000423945 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
SBDSP1-202ENST00000423945 NSD2O96028 1365 aa24.54■■□□□ 1.52
SBDSP1-202ENST00000423945 NCAPD2Q15021 1401 aa24.52■■□□□ 1.52
SBDSP1-202ENST00000423945 PPM1GO15355 546 aaPredicted RBP24.52■■□□□ 1.52
SBDSP1-202ENST00000423945 TNNT2P45379 298 aaPredicted RBP24.52■■□□□ 1.52
SBDSP1-202ENST00000423945 PLSCR1O15162 318 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms