RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OVOS2Q6IE36 1432 aa23.05■■□□□ 1.28
COL18A1-205ENST00000423214 ZNF692Q9BU19 519 aaPredicted RBP23.04■■□□□ 1.28
COL18A1-205ENST00000423214 KTN1Q86UP2 1357 aaKnown RBP23.03■■□□□ 1.28
COL18A1-205ENST00000423214 CAMKK2Q96RR4 588 aa23.03■■□□□ 1.28
COL18A1-205ENST00000423214 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
COL18A1-205ENST00000423214 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
COL18A1-205ENST00000423214 NFAT5O94916 1531 aa23.03■■□□□ 1.28
COL18A1-205ENST00000423214 ABCC6O95255 1503 aa23.03■■□□□ 1.28
COL18A1-205ENST00000423214 SBNO2Q9Y2G9 1366 aa23.02■■□□□ 1.28
COL18A1-205ENST00000423214 TOM1L2Q6ZVM7 507 aa23.02■■□□□ 1.28
COL18A1-205ENST00000423214 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
COL18A1-205ENST00000423214 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
COL18A1-205ENST00000423214 SOX12O15370 315 aa23■■□□□ 1.27
COL18A1-205ENST00000423214 WDR17Q8IZU2 1322 aa22.99■■□□□ 1.27
COL18A1-205ENST00000423214 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
COL18A1-205ENST00000423214 CARD11Q9BXL7 1154 aa22.98■■□□□ 1.27
COL18A1-205ENST00000423214 DDB1Q16531 1140 aa22.96■■□□□ 1.27
COL18A1-205ENST00000423214 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
COL18A1-205ENST00000423214 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
COL18A1-205ENST00000423214 NBPF14Q5TI25 921 aa22.94■■□□□ 1.26
COL18A1-205ENST00000423214 AXIN2Q9Y2T1 843 aa22.94■■□□□ 1.26
COL18A1-205ENST00000423214 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
COL18A1-205ENST00000423214 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
COL18A1-205ENST00000423214 FAM208AQ9UK61 1670 aaKnown RBP22.91■■□□□ 1.26
COL18A1-205ENST00000423214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
COL18A1-205ENST00000423214 KAT6BQ8WYB5 2073 aa22.91■■□□□ 1.26
COL18A1-205ENST00000423214 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
COL18A1-205ENST00000423214 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
COL18A1-205ENST00000423214 CCDC7Q96M83 1385 aa22.89■■□□□ 1.26
COL18A1-205ENST00000423214 HDGFL2Q7Z4V5 671 aaPredicted RBP22.89■■□□□ 1.25
COL18A1-205ENST00000423214 CARD10Q9BWT7 1032 aa22.89■■□□□ 1.25
COL18A1-205ENST00000423214 TNS2Q63HR2 1409 aa22.89■■□□□ 1.25
COL18A1-205ENST00000423214 EDC4Q6P2E9 1401 aaKnown RBP22.89■■□□□ 1.25
COL18A1-205ENST00000423214 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
COL18A1-205ENST00000423214 CASZ1Q86V15 1759 aa22.86■■□□□ 1.25
COL18A1-205ENST00000423214 BCL9O00512 1426 aa22.85■■□□□ 1.25
COL18A1-205ENST00000423214 NME9Q86XW9 330 aa22.85■■□□□ 1.25
COL18A1-205ENST00000423214 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
COL18A1-205ENST00000423214 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
COL18A1-205ENST00000423214 BCL11BQ9C0K0 894 aaPredicted RBP22.84■■□□□ 1.25
COL18A1-205ENST00000423214 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
COL18A1-205ENST00000423214 ERBB3P21860 1342 aa22.82■■□□□ 1.24
COL18A1-205ENST00000423214 BTAF1O14981 1849 aa22.82■■□□□ 1.24
COL18A1-205ENST00000423214 PLSCR1O15162 318 aa22.82■■□□□ 1.24
COL18A1-205ENST00000423214 NINLQ9Y2I6 1382 aa22.81■■□□□ 1.24
COL18A1-205ENST00000423214 EXOC5O00471 708 aa22.81■■□□□ 1.24
COL18A1-205ENST00000423214 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
COL18A1-205ENST00000423214 NLRP2Q9NX02 1062 aa22.79■■□□□ 1.24
COL18A1-205ENST00000423214 KIF20BQ96Q89 1820 aa22.79■■□□□ 1.24
COL18A1-205ENST00000423214 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
COL18A1-205ENST00000423214 SPON1Q9HCB6 807 aa22.78■■□□□ 1.24
COL18A1-205ENST00000423214 PPP1R1BQ9UD71 204 aaPredicted RBP22.78■■□□□ 1.24
COL18A1-205ENST00000423214 PTF1AQ7RTS3 328 aa22.77■■□□□ 1.24
COL18A1-205ENST00000423214 PUS7Q96PZ0 661 aaKnown RBP22.77■■□□□ 1.24
COL18A1-205ENST00000423214 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
COL18A1-205ENST00000423214 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
COL18A1-205ENST00000423214 KCNQ2O43526 872 aa22.74■■□□□ 1.23
COL18A1-205ENST00000423214 IL2RBP14784 551 aa22.74■■□□□ 1.23
COL18A1-205ENST00000423214 MYOM1P52179 1685 aa22.74■■□□□ 1.23
COL18A1-205ENST00000423214 DOT1LQ8TEK3 1739 aa22.74■■□□□ 1.23
COL18A1-205ENST00000423214 ST20-MTHFSA0A0A6YYL1 179 aa22.73■■□□□ 1.23
COL18A1-205ENST00000423214 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
COL18A1-205ENST00000423214 SLC24A1O60721 1099 aa22.72■■□□□ 1.23
COL18A1-205ENST00000423214 TESK2Q96S53 571 aa22.72■■□□□ 1.23
COL18A1-205ENST00000423214 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
COL18A1-205ENST00000423214 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
COL18A1-205ENST00000423214 TXNRD1Q16881 649 aa22.7■■□□□ 1.22
COL18A1-205ENST00000423214 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
COL18A1-205ENST00000423214 ANKRD36BQ8N2N9 1353 aa22.69■■□□□ 1.22
COL18A1-205ENST00000423214 COG3Q96JB2 828 aa22.69■■□□□ 1.22
COL18A1-205ENST00000423214 STK32BQ9NY57 414 aa22.69■■□□□ 1.22
COL18A1-205ENST00000423214 USP47Q96K76 1375 aa22.67■■□□□ 1.22
COL18A1-205ENST00000423214 PROM2Q8N271 834 aa22.67■■□□□ 1.22
COL18A1-205ENST00000423214 IP6K1Q92551 441 aa22.67■■□□□ 1.22
COL18A1-205ENST00000423214 QSER1Q2KHR3 1735 aa22.67■■□□□ 1.22
COL18A1-205ENST00000423214 LTV1Q96GA3 475 aaPredicted RBP22.66■■□□□ 1.22
COL18A1-205ENST00000423214 RTL1A6NKG5 1358 aa22.64■■□□□ 1.22
COL18A1-205ENST00000423214 TUBGCP6Q96RT7 1819 aa22.64■■□□□ 1.22
COL18A1-205ENST00000423214 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.21
COL18A1-205ENST00000423214 AMPHP49418 695 aa22.64■■□□□ 1.21
COL18A1-205ENST00000423214 TMF1P82094 1093 aa22.64■■□□□ 1.21
COL18A1-205ENST00000423214 MAP3K19Q56UN5 1328 aa22.63■■□□□ 1.21
COL18A1-205ENST00000423214 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
COL18A1-205ENST00000423214 SLC15A2Q16348 729 aa22.63■■□□□ 1.21
COL18A1-205ENST00000423214 LY75O60449 1722 aa22.62■■□□□ 1.21
COL18A1-205ENST00000423214 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
COL18A1-205ENST00000423214 HOXC9P31274 260 aa22.61■■□□□ 1.21
COL18A1-205ENST00000423214 SMG6Q86US8 1419 aaKnown RBP22.61■■□□□ 1.21
COL18A1-205ENST00000423214 DDX54Q8TDD1 881 aaKnown RBP22.59■■□□□ 1.21
COL18A1-205ENST00000423214 MEGF6O75095 1541 aa22.58■■□□□ 1.21
COL18A1-205ENST00000423214 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
COL18A1-205ENST00000423214 CHD4Q14839 1912 aa22.57■■□□□ 1.2
COL18A1-205ENST00000423214 YY1P25490 414 aa22.56■■□□□ 1.2
COL18A1-205ENST00000423214 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
COL18A1-205ENST00000423214 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
COL18A1-205ENST00000423214 ANKRD26Q9UPS8 1709 aa22.55■■□□□ 1.2
COL18A1-205ENST00000423214 FBLN1P23142 703 aa22.55■■□□□ 1.2
COL18A1-205ENST00000423214 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
COL18A1-205ENST00000423214 PTGER2P43116 358 aa22.54■■□□□ 1.2
COL18A1-205ENST00000423214 RRS1Q15050 365 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms