RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 AATKQ6ZMQ8 1374 aa40.35■■■■■ 4.05
NKX1-1-201ENST00000422806 PSDA5PKW4 1024 aaPredicted RBP40.34■■■■■ 4.05
NKX1-1-201ENST00000422806 THRAP3Q9Y2W1 955 aaKnown RBP40.34■■■■■ 4.05
NKX1-1-201ENST00000422806 NME9Q86XW9 330 aa40.33■■■■■ 4.05
NKX1-1-201ENST00000422806 NINLQ9Y2I6 1382 aa40.33■■■■■ 4.05
NKX1-1-201ENST00000422806 PDE3BQ13370 1112 aa40.32■■■■■ 4.05
NKX1-1-201ENST00000422806 A0A1W2PP64 1363 aa40.32■■■■■ 4.04
NKX1-1-201ENST00000422806 COL5A2P05997 1499 aaPredicted RBP40.32■■■■■ 4.04
NKX1-1-201ENST00000422806 ARHGEF25Q86VW2 580 aa40.31■■■■■ 4.04
NKX1-1-201ENST00000422806 TRIM37O94972 964 aa40.3■■■■■ 4.04
NKX1-1-201ENST00000422806 PARD3Q8TEW0 1356 aa40.3■■■■■ 4.04
NKX1-1-201ENST00000422806 EDC4Q6P2E9 1401 aaKnown RBP40.3■■■■■ 4.04
NKX1-1-201ENST00000422806 USP31Q70CQ4 1352 aa40.27■■■■■ 4.04
NKX1-1-201ENST00000422806 CDCA8Q53HL2 280 aa40.27■■■■■ 4.04
NKX1-1-201ENST00000422806 EZH2Q15910 746 aaKnown RBP40.26■■■■■ 4.04
NKX1-1-201ENST00000422806 CAMKK2Q96RR4 588 aa40.25■■■■■ 4.03
NKX1-1-201ENST00000422806 AXIN2Q9Y2T1 843 aa40.25■■■■■ 4.03
NKX1-1-201ENST00000422806 CRB1P82279 1406 aa40.24■■■■■ 4.03
NKX1-1-201ENST00000422806 TOM1L2Q6ZVM7 507 aa40.23■■■■■ 4.03
NKX1-1-201ENST00000422806 APBA3O96018 575 aa40.21■■■■■ 4.03
NKX1-1-201ENST00000422806 R3HDM1Q15032 1099 aaKnown RBP40.2■■■■■ 4.03
NKX1-1-201ENST00000422806 PARP4Q9UKK3 1724 aaKnown RBP40.19■■■■■ 4.02
NKX1-1-201ENST00000422806 C11orf95C9JLR9 678 aaPredicted RBP40.19■■■■■ 4.02
NKX1-1-201ENST00000422806 CSB-PGBD3P0DP91 1061 aa40.19■■■■■ 4.02
NKX1-1-201ENST00000422806 COL18A1P39060 1754 aa40.19■■■■■ 4.02
NKX1-1-201ENST00000422806 NFAT5O94916 1531 aa40.17■■■■■ 4.02
NKX1-1-201ENST00000422806 WDR17Q8IZU2 1322 aa40.16■■■■■ 4.02
NKX1-1-201ENST00000422806 ANKRD36BQ8N2N9 1353 aa40.15■■■■■ 4.02
NKX1-1-201ENST00000422806 COG3Q96JB2 828 aa40.12■■■■■ 4.01
NKX1-1-201ENST00000422806 RGPD5Q99666 1765 aa40.11■■■■■ 4.01
NKX1-1-201ENST00000422806 USP54Q70EL1 1684 aa40.11■■■■■ 4.01
NKX1-1-201ENST00000422806 RREB1Q92766 1687 aa40.09■■■■■ 4.01
NKX1-1-201ENST00000422806 OVOS2A0A0G2JMS6 1433 aa40.08■■■■■ 4.01
NKX1-1-201ENST00000422806 OVOS2A0A0J9YW53 1432 aa40.08■■■■■ 4.01
NKX1-1-201ENST00000422806 OVOS2Q6IE36 1432 aa40.08■■■■■ 4.01
NKX1-1-201ENST00000422806 EIF4G2P78344 907 aaKnown RBP eCLIP40.06■■■■■ 4
NKX1-1-201ENST00000422806 CARD10Q9BWT7 1032 aa40.06■■■■■ 4
NKX1-1-201ENST00000422806 LRRC37A3O60309 1634 aa40.04■■■■■ 4
NKX1-1-201ENST00000422806 DDB1Q16531 1140 aa40.03■■■■■ 4
NKX1-1-201ENST00000422806 ABCC6O95255 1503 aa40.02■■■■■ 4
NKX1-1-201ENST00000422806 NBPF14Q5TI25 921 aa40.02■■■■■ 4
NKX1-1-201ENST00000422806 POLR3GLQ9BT43 218 aa40.02■■■■■ 4
NKX1-1-201ENST00000422806 CDCA7Q9BWT1 371 aaPredicted RBP40.02■■■■■ 4
NKX1-1-201ENST00000422806 NUP188Q5SRE5 1749 aa40.02■■■■■ 4
NKX1-1-201ENST00000422806 PEAK1Q9H792 1746 aa40.02■■■■■ 4
NKX1-1-201ENST00000422806 LTN1O94822 1766 aa40.01■■■■■ 4
NKX1-1-201ENST00000422806 FYB1O15117 783 aa39.98■■■■□ 3.99
NKX1-1-201ENST00000422806 HSPA5P11021 654 aaKnown RBP39.98■■■■□ 3.99
NKX1-1-201ENST00000422806 GGNBP2Q9H3C7 697 aa39.98■■■■□ 3.99
NKX1-1-201ENST00000422806 NLRP2Q9NX02 1062 aa39.98■■■■□ 3.99
NKX1-1-201ENST00000422806 ANKRD24Q8TF21 1146 aa39.96■■■■□ 3.99
NKX1-1-201ENST00000422806 CCDC7Q96M83 1385 aa39.96■■■■□ 3.99
NKX1-1-201ENST00000422806 WNK3Q9BYP7 1800 aa39.95■■■■□ 3.99
NKX1-1-201ENST00000422806 ERBB3P21860 1342 aa39.95■■■■□ 3.99
NKX1-1-201ENST00000422806 IP6K1Q92551 441 aa39.95■■■■□ 3.99
NKX1-1-201ENST00000422806 BCL9O00512 1426 aa39.93■■■■□ 3.98
NKX1-1-201ENST00000422806 RGPD3A6NKT7 1758 aaPredicted RBP39.92■■■■□ 3.98
NKX1-1-201ENST00000422806 RGPD4Q7Z3J3 1758 aa39.92■■■■□ 3.98
NKX1-1-201ENST00000422806 FBLN1P23142 703 aa39.92■■■■□ 3.98
NKX1-1-201ENST00000422806 AMPHP49418 695 aa39.92■■■■□ 3.98
NKX1-1-201ENST00000422806 PLSCR1O15162 318 aa39.9■■■■□ 3.98
NKX1-1-201ENST00000422806 CARD14Q9BXL6 1004 aa39.9■■■■□ 3.98
NKX1-1-201ENST00000422806 EXOC5O00471 708 aa39.89■■■■□ 3.98
NKX1-1-201ENST00000422806 LTV1Q96GA3 475 aaPredicted RBP39.89■■■■□ 3.98
NKX1-1-201ENST00000422806 BCL11BQ9C0K0 894 aaPredicted RBP39.89■■■■□ 3.98
NKX1-1-201ENST00000422806 MAP3K19Q56UN5 1328 aa39.89■■■■□ 3.98
NKX1-1-201ENST00000422806 SBF2Q86WG5 1849 aa39.87■■■■□ 3.97
NKX1-1-201ENST00000422806 MARCH10Q8NA82 808 aaPredicted RBP39.85■■■■□ 3.97
NKX1-1-201ENST00000422806 MYOM1P52179 1685 aa39.85■■■■□ 3.97
NKX1-1-201ENST00000422806 NSD3Q9BZ95 1437 aa39.84■■■■□ 3.97
NKX1-1-201ENST00000422806 HOXC9P31274 260 aa39.84■■■■□ 3.97
NKX1-1-201ENST00000422806 RRS1Q15050 365 aaKnown RBP39.83■■■■□ 3.97
NKX1-1-201ENST00000422806 IL2RBP14784 551 aa39.81■■■■□ 3.96
NKX1-1-201ENST00000422806 KIF20BQ96Q89 1820 aa39.79■■■■□ 3.96
NKX1-1-201ENST00000422806 TNS2Q63HR2 1409 aa39.78■■■■□ 3.96
NKX1-1-201ENST00000422806 CGNL1Q0VF96 1302 aa39.76■■■■□ 3.96
NKX1-1-201ENST00000422806 SPON1Q9HCB6 807 aa39.76■■■■□ 3.96
NKX1-1-201ENST00000422806 PTF1AQ7RTS3 328 aa39.74■■■■□ 3.95
NKX1-1-201ENST00000422806 RTL1A6NKG5 1358 aa39.72■■■■□ 3.95
NKX1-1-201ENST00000422806 KCNQ2O43526 872 aa39.72■■■■□ 3.95
NKX1-1-201ENST00000422806 ANO8Q9HCE9 1232 aaPredicted RBP39.7■■■■□ 3.95
NKX1-1-201ENST00000422806 PANK3Q9H999 370 aa39.69■■■■□ 3.94
NKX1-1-201ENST00000422806 FAM208AQ9UK61 1670 aaKnown RBP39.67■■■■□ 3.94
NKX1-1-201ENST00000422806 PPP1R1BQ9UD71 204 aaPredicted RBP39.67■■■■□ 3.94
NKX1-1-201ENST00000422806 PROM2Q8N271 834 aa39.66■■■■□ 3.94
NKX1-1-201ENST00000422806 HSP90AB2PQ58FF8 381 aa39.64■■■■□ 3.94
NKX1-1-201ENST00000422806 SMG6Q86US8 1419 aaKnown RBP39.64■■■■□ 3.94
NKX1-1-201ENST00000422806 PPM1GO15355 546 aaPredicted RBP39.63■■■■□ 3.93
NKX1-1-201ENST00000422806 FLT4P35916 1363 aa39.62■■■■□ 3.93
NKX1-1-201ENST00000422806 TXNRD1Q16881 649 aa39.61■■■■□ 3.93
NKX1-1-201ENST00000422806 KIF24Q5T7B8 1368 aa39.6■■■■□ 3.93
NKX1-1-201ENST00000422806 CASZ1Q86V15 1759 aa39.6■■■■□ 3.93
NKX1-1-201ENST00000422806 EMILIN1Q9Y6C2 1016 aa39.6■■■■□ 3.93
NKX1-1-201ENST00000422806 KAT6BQ8WYB5 2073 aa39.6■■■■□ 3.93
NKX1-1-201ENST00000422806 INSRP06213 1382 aa39.59■■■■□ 3.93
NKX1-1-201ENST00000422806 NBPF6Q5VWK0 638 aa39.59■■■■□ 3.93
NKX1-1-201ENST00000422806 DDX54Q8TDD1 881 aaKnown RBP39.59■■■■□ 3.93
NKX1-1-201ENST00000422806 NBPF4Q96M43 638 aa39.59■■■■□ 3.93
NKX1-1-201ENST00000422806 NHSQ6T4R5 1651 aa39.59■■■■□ 3.93
NKX1-1-201ENST00000422806 RGPD2P0DJD1 1756 aa39.57■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms