RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
NUP50-206ENST00000422489 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
NUP50-206ENST00000422489 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
NUP50-206ENST00000422489 SLIT3O75094 1523 aa13□□□□□ -0.33
NUP50-206ENST00000422489 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
NUP50-206ENST00000422489 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
NUP50-206ENST00000422489 TIMELESSQ9UNS1 1208 aa13□□□□□ -0.33
NUP50-206ENST00000422489 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
NUP50-206ENST00000422489 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
NUP50-206ENST00000422489 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 USP47Q96K76 1375 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 EXOC5O00471 708 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 COG3Q96JB2 828 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
NUP50-206ENST00000422489 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
NUP50-206ENST00000422489 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
NUP50-206ENST00000422489 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
NUP50-206ENST00000422489 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
NUP50-206ENST00000422489 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
NUP50-206ENST00000422489 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
NUP50-206ENST00000422489 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
NUP50-206ENST00000422489 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
NUP50-206ENST00000422489 FBLN1P23142 703 aa12.96□□□□□ -0.33
NUP50-206ENST00000422489 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
NUP50-206ENST00000422489 MARCH10Q8NA82 808 aaPredicted RBP12.96□□□□□ -0.33
NUP50-206ENST00000422489 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.33
NUP50-206ENST00000422489 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
NUP50-206ENST00000422489 AMPHP49418 695 aa12.95□□□□□ -0.34
NUP50-206ENST00000422489 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
NUP50-206ENST00000422489 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
NUP50-206ENST00000422489 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
NUP50-206ENST00000422489 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
NUP50-206ENST00000422489 IP6K1Q92551 441 aa12.93□□□□□ -0.34
NUP50-206ENST00000422489 AKAP12Q02952 1782 aa12.93□□□□□ -0.34
NUP50-206ENST00000422489 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
NUP50-206ENST00000422489 FYB1O15117 783 aa12.92□□□□□ -0.34
NUP50-206ENST00000422489 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
NUP50-206ENST00000422489 NFAT5O94916 1531 aa12.92□□□□□ -0.34
NUP50-206ENST00000422489 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
NUP50-206ENST00000422489 ERBB3P21860 1342 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 IL2RBP14784 551 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 EP400Q96L91 3159 aa12.91□□□□□ -0.34
NUP50-206ENST00000422489 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
NUP50-206ENST00000422489 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
NUP50-206ENST00000422489 COL18A1P39060 1754 aa12.9□□□□□ -0.34
NUP50-206ENST00000422489 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
NUP50-206ENST00000422489 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
NUP50-206ENST00000422489 HOXC9P31274 260 aa12.89□□□□□ -0.35
NUP50-206ENST00000422489 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
NUP50-206ENST00000422489 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
NUP50-206ENST00000422489 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
NUP50-206ENST00000422489 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
NUP50-206ENST00000422489 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
NUP50-206ENST00000422489 PLSCR1O15162 318 aa12.88□□□□□ -0.35
NUP50-206ENST00000422489 KCNQ2O43526 872 aa12.88□□□□□ -0.35
NUP50-206ENST00000422489 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
NUP50-206ENST00000422489 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
NUP50-206ENST00000422489 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
NUP50-206ENST00000422489 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
NUP50-206ENST00000422489 PROM2Q8N271 834 aa12.85□□□□□ -0.35
NUP50-206ENST00000422489 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
NUP50-206ENST00000422489 HSP90AB2PQ58FF8 381 aa12.84□□□□□ -0.35
NUP50-206ENST00000422489 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
NUP50-206ENST00000422489 USHBP1Q8N6Y0 703 aa12.84□□□□□ -0.35
NUP50-206ENST00000422489 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
NUP50-206ENST00000422489 ABCC6O95255 1503 aa12.83□□□□□ -0.35
NUP50-206ENST00000422489 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
NUP50-206ENST00000422489 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
NUP50-206ENST00000422489 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
NUP50-206ENST00000422489 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
NUP50-206ENST00000422489 RGPD5Q99666 1765 aa12.83□□□□□ -0.36
NUP50-206ENST00000422489 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
NUP50-206ENST00000422489 TNNT2P45379 298 aaPredicted RBP12.82□□□□□ -0.36
NUP50-206ENST00000422489 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
NUP50-206ENST00000422489 STK32BQ9NY57 414 aa12.82□□□□□ -0.36
NUP50-206ENST00000422489 BCL9O00512 1426 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
NUP50-206ENST00000422489 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 PANK3Q9H999 370 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
NUP50-206ENST00000422489 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
NUP50-206ENST00000422489 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
NUP50-206ENST00000422489 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
NUP50-206ENST00000422489 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
NUP50-206ENST00000422489 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
NUP50-206ENST00000422489 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
NUP50-206ENST00000422489 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
NUP50-206ENST00000422489 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
NUP50-206ENST00000422489 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
NUP50-206ENST00000422489 INSRP06213 1382 aa12.78□□□□□ -0.36
NUP50-206ENST00000422489 LTN1O94822 1766 aa12.77□□□□□ -0.36
NUP50-206ENST00000422489 ZBTB7AO95365 584 aa12.77□□□□□ -0.37
NUP50-206ENST00000422489 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms