RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
LINC00397-201ENST00000422074 ESPNB1AK53 854 aa9.21□□□□□ -0.94
LINC00397-201ENST00000422074 ZIC2O95409 532 aaPredicted RBP9.21□□□□□ -0.94
LINC00397-201ENST00000422074 FBXO45P0C2W1 286 aa9.21□□□□□ -0.94
LINC00397-201ENST00000422074 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
LINC00397-201ENST00000422074 ITPKCQ96DU7 683 aa9.21□□□□□ -0.94
LINC00397-201ENST00000422074 EMILIN1Q9Y6C2 1016 aa9.21□□□□□ -0.94
LINC00397-201ENST00000422074 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
LINC00397-201ENST00000422074 NR1H3Q13133 447 aa9.19□□□□□ -0.94
LINC00397-201ENST00000422074 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
LINC00397-201ENST00000422074 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
LINC00397-201ENST00000422074 ZFAND3Q9H8U3 227 aa9.19□□□□□ -0.94
LINC00397-201ENST00000422074 C11orf95C9JLR9 678 aaPredicted RBP9.18□□□□□ -0.94
LINC00397-201ENST00000422074 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
LINC00397-201ENST00000422074 DHX9Q08211 1270 aaKnown RBP9.18□□□□□ -0.94
LINC00397-201ENST00000422074 INTS6LQ5JSJ4 861 aaKnown RBP9.18□□□□□ -0.94
LINC00397-201ENST00000422074 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
LINC00397-201ENST00000422074 BMP1P13497 986 aa9.17□□□□□ -0.94
LINC00397-201ENST00000422074 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
LINC00397-201ENST00000422074 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
LINC00397-201ENST00000422074 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
LINC00397-201ENST00000422074 MCM6Q14566 821 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 Q6ZVU0 165 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
LINC00397-201ENST00000422074 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
LINC00397-201ENST00000422074 ZNF592Q92610 1267 aa9.15□□□□□ -0.94
LINC00397-201ENST00000422074 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
LINC00397-201ENST00000422074 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
LINC00397-201ENST00000422074 IRF5Q13568 498 aa9.14□□□□□ -0.95
LINC00397-201ENST00000422074 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
LINC00397-201ENST00000422074 SCARF1Q14162 830 aa9.13□□□□□ -0.95
LINC00397-201ENST00000422074 ZNF330Q9Y3S2 320 aaPredicted RBP9.13□□□□□ -0.95
LINC00397-201ENST00000422074 PCDHB9Q9Y5E1 797 aa9.13□□□□□ -0.95
LINC00397-201ENST00000422074 ERVH48-1M5A8F1 160 aa9.11□□□□□ -0.95
LINC00397-201ENST00000422074 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
LINC00397-201ENST00000422074 LILRA1O75019 489 aa9.1□□□□□ -0.95
LINC00397-201ENST00000422074 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
LINC00397-201ENST00000422074 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
LINC00397-201ENST00000422074 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
LINC00397-201ENST00000422074 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
LINC00397-201ENST00000422074 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
LINC00397-201ENST00000422074 FLIIQ13045 1269 aa9.08□□□□□ -0.96
LINC00397-201ENST00000422074 CBLBQ13191 982 aa9.08□□□□□ -0.96
LINC00397-201ENST00000422074 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
LINC00397-201ENST00000422074 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
LINC00397-201ENST00000422074 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
LINC00397-201ENST00000422074 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
LINC00397-201ENST00000422074 UPP2O95045 317 aa9.07□□□□□ -0.96
LINC00397-201ENST00000422074 COG6Q9Y2V7 657 aa9.07□□□□□ -0.96
LINC00397-201ENST00000422074 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
LINC00397-201ENST00000422074 SPINT1O43278 529 aa9.06□□□□□ -0.96
LINC00397-201ENST00000422074 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
LINC00397-201ENST00000422074 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
LINC00397-201ENST00000422074 BMP2P12643 396 aa9.05□□□□□ -0.96
LINC00397-201ENST00000422074 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
LINC00397-201ENST00000422074 EIF4G2P78344 907 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00397-201ENST00000422074 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
LINC00397-201ENST00000422074 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
LINC00397-201ENST00000422074 ABL2P42684 1182 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 RAB15P59190 212 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 ERVK-9P63128 1117 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 NPAS3Q8IXF0 933 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 PHTF2Q8N3S3 785 aa9.04□□□□□ -0.96
LINC00397-201ENST00000422074 TERTO14746 1132 aaKnown RBP9.03□□□□□ -0.96
LINC00397-201ENST00000422074 ADH1AP07327 375 aa9.03□□□□□ -0.96
LINC00397-201ENST00000422074 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
LINC00397-201ENST00000422074 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
LINC00397-201ENST00000422074 SOX11P35716 441 aa9.01□□□□□ -0.97
LINC00397-201ENST00000422074 PTGIRP43119 386 aa9.01□□□□□ -0.97
LINC00397-201ENST00000422074 VAC14Q08AM6 782 aa9.01□□□□□ -0.97
LINC00397-201ENST00000422074 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
LINC00397-201ENST00000422074 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
LINC00397-201ENST00000422074 TTLL8A6PVC2 850 aa9□□□□□ -0.97
LINC00397-201ENST00000422074 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
LINC00397-201ENST00000422074 CYLDQ9NQC7 956 aa9□□□□□ -0.97
LINC00397-201ENST00000422074 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
LINC00397-201ENST00000422074 MAN1A2O60476 641 aa8.99□□□□□ -0.97
LINC00397-201ENST00000422074 POM121Q96HA1 1249 aa8.99□□□□□ -0.97
LINC00397-201ENST00000422074 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
LINC00397-201ENST00000422074 SOBPA7XYQ1 873 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 TRAK2O60296 914 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 WFS1O76024 890 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 SCTRP47872 440 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 RELBQ01201 579 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
LINC00397-201ENST00000422074 H3BM21 787 aa8.97□□□□□ -0.97
LINC00397-201ENST00000422074 RAD21O60216 631 aa8.97□□□□□ -0.97
LINC00397-201ENST00000422074 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
LINC00397-201ENST00000422074 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
LINC00397-201ENST00000422074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.97□□□□□ -0.97
LINC00397-201ENST00000422074 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
LINC00397-201ENST00000422074 ALG2Q9H553 416 aa8.97□□□□□ -0.97
LINC00397-201ENST00000422074 ATP5J2-PTCD1G3V325 749 aa8.96□□□□□ -0.98
LINC00397-201ENST00000422074 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
LINC00397-201ENST00000422074 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.98
LINC00397-201ENST00000422074 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms