RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.8■■■□□ 2.36
CPNE1-211ENST00000420363 USP35Q9P2H5 1018 aa29.8■■■□□ 2.36
CPNE1-211ENST00000420363 COL18A1P39060 1754 aa29.8■■■□□ 2.36
CPNE1-211ENST00000420363 AATKQ6ZMQ8 1374 aa29.79■■■□□ 2.36
CPNE1-211ENST00000420363 HSPA5P11021 654 aaKnown RBP29.79■■■□□ 2.36
CPNE1-211ENST00000420363 COL5A2P05997 1499 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-211ENST00000420363 PSDA5PKW4 1024 aaPredicted RBP29.76■■■□□ 2.35
CPNE1-211ENST00000420363 FAM196AQ6ZSG2 479 aa29.76■■■□□ 2.35
CPNE1-211ENST00000420363 NME9Q86XW9 330 aa29.76■■■□□ 2.35
CPNE1-211ENST00000420363 THSD7AQ9UPZ6 1657 aa29.75■■■□□ 2.35
CPNE1-211ENST00000420363 ARHGEF25Q86VW2 580 aa29.73■■■□□ 2.35
CPNE1-211ENST00000420363 KIF20BQ96Q89 1820 aa29.73■■■□□ 2.35
CPNE1-211ENST00000420363 LTN1O94822 1766 aa29.72■■■□□ 2.35
CPNE1-211ENST00000420363 PDE3BQ13370 1112 aa29.72■■■□□ 2.35
CPNE1-211ENST00000420363 LARP1Q6PKG0 1096 aaKnown RBP29.72■■■□□ 2.35
CPNE1-211ENST00000420363 BARGINQ6ZT62 677 aa29.72■■■□□ 2.35
CPNE1-211ENST00000420363 TRIM37O94972 964 aa29.71■■■□□ 2.35
CPNE1-211ENST00000420363 RGPD1P0DJD0 1748 aa29.69■■■□□ 2.34
CPNE1-211ENST00000420363 TCP11L2Q8N4U5 519 aa29.69■■■□□ 2.34
CPNE1-211ENST00000420363 ZBTB7CA1YPR0 619 aa29.67■■■□□ 2.34
CPNE1-211ENST00000420363 EZH2Q15910 746 aaKnown RBP29.67■■■□□ 2.34
CPNE1-211ENST00000420363 CRB1P82279 1406 aa29.66■■■□□ 2.34
CPNE1-211ENST00000420363 THRAP3Q9Y2W1 955 aaKnown RBP29.66■■■□□ 2.34
CPNE1-211ENST00000420363 RGPD5Q99666 1765 aa29.66■■■□□ 2.34
CPNE1-211ENST00000420363 DISP2A7MBM2 1401 aa29.65■■■□□ 2.34
CPNE1-211ENST00000420363 APBA3O96018 575 aa29.65■■■□□ 2.34
CPNE1-211ENST00000420363 SOX12O15370 315 aa29.64■■■□□ 2.34
CPNE1-211ENST00000420363 R3HDM1Q15032 1099 aaKnown RBP29.64■■■□□ 2.34
CPNE1-211ENST00000420363 COG3Q96JB2 828 aa29.64■■■□□ 2.34
CPNE1-211ENST00000420363 NSD3Q9BZ95 1437 aa29.63■■■□□ 2.33
CPNE1-211ENST00000420363 CAMKK2Q96RR4 588 aa29.63■■■□□ 2.33
CPNE1-211ENST00000420363 WNK3Q9BYP7 1800 aa29.61■■■□□ 2.33
CPNE1-211ENST00000420363 AXIN2Q9Y2T1 843 aa29.6■■■□□ 2.33
CPNE1-211ENST00000420363 WDR17Q8IZU2 1322 aa29.6■■■□□ 2.33
CPNE1-211ENST00000420363 PARP4Q9UKK3 1724 aaKnown RBP29.59■■■□□ 2.33
CPNE1-211ENST00000420363 FYB1O15117 783 aa29.59■■■□□ 2.33
CPNE1-211ENST00000420363 CARD14Q9BXL6 1004 aa29.58■■■□□ 2.33
CPNE1-211ENST00000420363 TNS1Q9HBL0 1735 aaKnown RBP29.57■■■□□ 2.32
CPNE1-211ENST00000420363 LRP5O75197 1615 aa29.57■■■□□ 2.32
CPNE1-211ENST00000420363 FAM208AQ9UK61 1670 aaKnown RBP29.56■■■□□ 2.32
CPNE1-211ENST00000420363 PARD3Q8TEW0 1356 aa29.55■■■□□ 2.32
CPNE1-211ENST00000420363 ANKRD26Q9UPS8 1709 aa29.55■■■□□ 2.32
CPNE1-211ENST00000420363 C11orf95C9JLR9 678 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-211ENST00000420363 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
CPNE1-211ENST00000420363 RTL1A6NKG5 1358 aa29.54■■■□□ 2.32
CPNE1-211ENST00000420363 ERBB3P21860 1342 aa29.53■■■□□ 2.32
CPNE1-211ENST00000420363 CGNL1Q0VF96 1302 aa29.53■■■□□ 2.32
CPNE1-211ENST00000420363 TOM1L2Q6ZVM7 507 aa29.53■■■□□ 2.32
CPNE1-211ENST00000420363 GGNBP2Q9H3C7 697 aa29.53■■■□□ 2.32
CPNE1-211ENST00000420363 LRRC37A3O60309 1634 aa29.51■■■□□ 2.31
CPNE1-211ENST00000420363 NBPF14Q5TI25 921 aa29.5■■■□□ 2.31
CPNE1-211ENST00000420363 CCDC7Q96M83 1385 aa29.5■■■□□ 2.31
CPNE1-211ENST00000420363 KIF7Q2M1P5 1343 aa29.49■■■□□ 2.31
CPNE1-211ENST00000420363 CARD10Q9BWT7 1032 aa29.49■■■□□ 2.31
CPNE1-211ENST00000420363 MAP3K19Q56UN5 1328 aa29.48■■■□□ 2.31
CPNE1-211ENST00000420363 CSB-PGBD3P0DP91 1061 aa29.48■■■□□ 2.31
CPNE1-211ENST00000420363 IP6K1Q92551 441 aa29.48■■■□□ 2.31
CPNE1-211ENST00000420363 KIF24Q5T7B8 1368 aa29.48■■■□□ 2.31
CPNE1-211ENST00000420363 DDB1Q16531 1140 aa29.47■■■□□ 2.31
CPNE1-211ENST00000420363 NSD2O96028 1365 aa29.46■■■□□ 2.31
CPNE1-211ENST00000420363 CDCA7Q9BWT1 371 aaPredicted RBP29.45■■■□□ 2.31
CPNE1-211ENST00000420363 PANK3Q9H999 370 aa29.45■■■□□ 2.31
CPNE1-211ENST00000420363 ANKRD24Q8TF21 1146 aa29.43■■■□□ 2.3
CPNE1-211ENST00000420363 PEAK1Q9H792 1746 aa29.42■■■□□ 2.3
CPNE1-211ENST00000420363 HOXC9P31274 260 aa29.42■■■□□ 2.3
CPNE1-211ENST00000420363 OVOS2A0A0G2JMS6 1433 aa29.42■■■□□ 2.3
CPNE1-211ENST00000420363 AMPHP49418 695 aa29.41■■■□□ 2.3
CPNE1-211ENST00000420363 FLT4P35916 1363 aa29.39■■■□□ 2.3
CPNE1-211ENST00000420363 RRS1Q15050 365 aaKnown RBP29.39■■■□□ 2.3
CPNE1-211ENST00000420363 FBLN1P23142 703 aa29.38■■■□□ 2.29
CPNE1-211ENST00000420363 TNS2Q63HR2 1409 aa29.37■■■□□ 2.29
CPNE1-211ENST00000420363 SMG6Q86US8 1419 aaKnown RBP29.37■■■□□ 2.29
CPNE1-211ENST00000420363 NLRP2Q9NX02 1062 aa29.36■■■□□ 2.29
CPNE1-211ENST00000420363 INSRP06213 1382 aa29.36■■■□□ 2.29
CPNE1-211ENST00000420363 MAP2P11137 1827 aaKnown RBP29.36■■■□□ 2.29
CPNE1-211ENST00000420363 PLSCR1O15162 318 aa29.35■■■□□ 2.29
CPNE1-211ENST00000420363 MARCH10Q8NA82 808 aaPredicted RBP29.35■■■□□ 2.29
CPNE1-211ENST00000420363 BCL11BQ9C0K0 894 aaPredicted RBP29.35■■■□□ 2.29
CPNE1-211ENST00000420363 RREB1Q92766 1687 aa29.34■■■□□ 2.29
CPNE1-211ENST00000420363 WASHC2AQ641Q2 1341 aa29.33■■■□□ 2.29
CPNE1-211ENST00000420363 RGPD2P0DJD1 1756 aa29.33■■■□□ 2.29
CPNE1-211ENST00000420363 EXOC5O00471 708 aa29.32■■■□□ 2.28
CPNE1-211ENST00000420363 KNSTRNQ9Y448 316 aa29.32■■■□□ 2.28
CPNE1-211ENST00000420363 NUP188Q5SRE5 1749 aa29.31■■■□□ 2.28
CPNE1-211ENST00000420363 BCL9O00512 1426 aa29.31■■■□□ 2.28
CPNE1-211ENST00000420363 IL2RBP14784 551 aa29.29■■■□□ 2.28
CPNE1-211ENST00000420363 PTF1AQ7RTS3 328 aa29.29■■■□□ 2.28
CPNE1-211ENST00000420363 EMILIN1Q9Y6C2 1016 aa29.29■■■□□ 2.28
CPNE1-211ENST00000420363 LTV1Q96GA3 475 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-211ENST00000420363 SPON1Q9HCB6 807 aa29.28■■■□□ 2.28
CPNE1-211ENST00000420363 SBF2Q86WG5 1849 aa29.27■■■□□ 2.28
CPNE1-211ENST00000420363 HSP90AB2PQ58FF8 381 aa29.26■■■□□ 2.27
CPNE1-211ENST00000420363 AMER1Q5JTC6 1135 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-211ENST00000420363 PPP1R1BQ9UD71 204 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-211ENST00000420363 KCNQ2O43526 872 aa29.25■■■□□ 2.27
CPNE1-211ENST00000420363 POLKQ9UBT6 870 aa29.24■■■□□ 2.27
CPNE1-211ENST00000420363 NCAPD2Q15021 1401 aa29.23■■■□□ 2.27
CPNE1-211ENST00000420363 PER1O15534 1290 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-211ENST00000420363 NPC1L1Q9UHC9 1359 aa29.23■■■□□ 2.27
CPNE1-211ENST00000420363 PROM2Q8N271 834 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms