RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 FMN2Q9NZ56 1722 aa26.6■■□□□ 1.85
FAM3A-208ENST00000419205 IGHDP01880 384 aa26.6■■□□□ 1.85
FAM3A-208ENST00000419205 SMC4Q9NTJ3 1288 aa26.59■■□□□ 1.85
FAM3A-208ENST00000419205 TNNQ9UQP3 1299 aa26.59■■□□□ 1.85
FAM3A-208ENST00000419205 ADAMTSL3P82987 1691 aa26.59■■□□□ 1.85
FAM3A-208ENST00000419205 RGPD1P0DJD0 1748 aa26.59■■□□□ 1.85
FAM3A-208ENST00000419205 SSH1Q8WYL5 1049 aa26.58■■□□□ 1.85
FAM3A-208ENST00000419205 IPO9Q96P70 1041 aaKnown RBP26.58■■□□□ 1.85
FAM3A-208ENST00000419205 LMOD3Q0VAK6 560 aa26.57■■□□□ 1.84
FAM3A-208ENST00000419205 MVPQ14764 893 aaKnown RBP26.57■■□□□ 1.84
FAM3A-208ENST00000419205 ERICH6Q7L0X2 663 aa26.57■■□□□ 1.84
FAM3A-208ENST00000419205 DZIP1LQ8IYY4 767 aaKnown RBP26.57■■□□□ 1.84
FAM3A-208ENST00000419205 PMFBP1Q8TBY8 1022 aa26.57■■□□□ 1.84
FAM3A-208ENST00000419205 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
FAM3A-208ENST00000419205 ALDH1L2Q3SY69 923 aa26.56■■□□□ 1.84
FAM3A-208ENST00000419205 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
FAM3A-208ENST00000419205 EIF4A2Q14240 407 aaKnown RBP26.54■■□□□ 1.84
FAM3A-208ENST00000419205 IFT57Q9NWB7 429 aa26.54■■□□□ 1.84
FAM3A-208ENST00000419205 KIF16BQ96L93 1317 aa26.54■■□□□ 1.84
FAM3A-208ENST00000419205 PIK3C2AO00443 1686 aa26.53■■□□□ 1.84
FAM3A-208ENST00000419205 USP54Q70EL1 1684 aa26.53■■□□□ 1.84
FAM3A-208ENST00000419205 KCNA6P17658 529 aa26.53■■□□□ 1.84
FAM3A-208ENST00000419205 FTSJ3Q8IY81 847 aaKnown RBP26.53■■□□□ 1.84
FAM3A-208ENST00000419205 ZNF853P0CG23 659 aa26.53■■□□□ 1.84
FAM3A-208ENST00000419205 GNAI1P63096 354 aa26.53■■□□□ 1.84
FAM3A-208ENST00000419205 NOP58Q9Y2X3 529 aaKnown RBP26.53■■□□□ 1.84
FAM3A-208ENST00000419205 BRPF1P55201 1214 aaPredicted RBP26.52■■□□□ 1.84
FAM3A-208ENST00000419205 ATF7IPQ6VMQ6 1270 aa26.52■■□□□ 1.84
FAM3A-208ENST00000419205 TRIM27P14373 513 aa26.51■■□□□ 1.83
FAM3A-208ENST00000419205 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
FAM3A-208ENST00000419205 PCDHB15Q9Y5E8 787 aa26.51■■□□□ 1.83
FAM3A-208ENST00000419205 NGDNQ8NEJ9 315 aaKnown RBP26.5■■□□□ 1.83
FAM3A-208ENST00000419205 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
FAM3A-208ENST00000419205 IPO8O15397 1037 aaKnown RBP26.49■■□□□ 1.83
FAM3A-208ENST00000419205 ANKLE2Q86XL3 938 aa26.49■■□□□ 1.83
FAM3A-208ENST00000419205 NOB1Q9ULX3 412 aaKnown RBP26.48■■□□□ 1.83
FAM3A-208ENST00000419205 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
FAM3A-208ENST00000419205 RGS3P49796 1198 aa26.47■■□□□ 1.83
FAM3A-208ENST00000419205 THUMPD2Q9BTF0 503 aaKnown RBP26.47■■□□□ 1.83
FAM3A-208ENST00000419205 SBNO1A3KN83 1393 aa26.47■■□□□ 1.83
FAM3A-208ENST00000419205 MARF1Q9Y4F3 1742 aaKnown RBP26.47■■□□□ 1.83
FAM3A-208ENST00000419205 C8orf34Q49A92 452 aa26.46■■□□□ 1.83
FAM3A-208ENST00000419205 CFAP44Q96MT7 982 aa26.46■■□□□ 1.83
FAM3A-208ENST00000419205 DDX19BQ9UMR2 479 aa26.46■■□□□ 1.83
FAM3A-208ENST00000419205 LAS1LQ9Y4W2 734 aaKnown RBP26.46■■□□□ 1.83
FAM3A-208ENST00000419205 ARHGEF10O15013 1369 aa26.46■■□□□ 1.83
FAM3A-208ENST00000419205 SULT6B1Q6IMI4 303 aa26.46■■□□□ 1.83
FAM3A-208ENST00000419205 RWDD1Q9H446 243 aaPredicted RBP26.46■■□□□ 1.83
FAM3A-208ENST00000419205 HSP90AB2PQ58FF8 381 aa26.45■■□□□ 1.82
FAM3A-208ENST00000419205 MAP3K19Q56UN5 1328 aa26.45■■□□□ 1.82
FAM3A-208ENST00000419205 FLT4P35916 1363 aa26.44■■□□□ 1.82
FAM3A-208ENST00000419205 MBIPQ9NS73 344 aa26.44■■□□□ 1.82
FAM3A-208ENST00000419205 VAMP4O75379 141 aa26.43■■□□□ 1.82
FAM3A-208ENST00000419205 AEBP1Q8IUX7 1158 aa26.43■■□□□ 1.82
FAM3A-208ENST00000419205 NPM2Q86SE8 214 aaKnown RBP26.43■■□□□ 1.82
FAM3A-208ENST00000419205 ZBTB47Q9UFB7 747 aaPredicted RBP26.42■■□□□ 1.82
FAM3A-208ENST00000419205 KIF24Q5T7B8 1368 aa26.4■■□□□ 1.82
FAM3A-208ENST00000419205 PAK3O75914 559 aaPredicted RBP26.4■■□□□ 1.82
FAM3A-208ENST00000419205 ITPRIPQ8IWB1 547 aa26.4■■□□□ 1.82
FAM3A-208ENST00000419205 ARHGAP45Q92619 1136 aa26.4■■□□□ 1.82
FAM3A-208ENST00000419205 TMEM57Q8N5G2 664 aa26.38■■□□□ 1.81
FAM3A-208ENST00000419205 MRPL50Q8N5N7 158 aaKnown RBP26.38■■□□□ 1.81
FAM3A-208ENST00000419205 FAM83GA6ND36 823 aa26.38■■□□□ 1.81
FAM3A-208ENST00000419205 KDRP35968 1356 aa26.38■■□□□ 1.81
FAM3A-208ENST00000419205 HDAC1Q13547 482 aaPredicted RBP26.37■■□□□ 1.81
FAM3A-208ENST00000419205 TSPYL6Q8N831 410 aa26.37■■□□□ 1.81
FAM3A-208ENST00000419205 TWISTNBQ3B726 338 aaPredicted RBP26.35■■□□□ 1.81
FAM3A-208ENST00000419205 ZBTB40Q9NUA8 1239 aa26.35■■□□□ 1.81
FAM3A-208ENST00000419205 ADGRL3Q9HAR2 1447 aa26.35■■□□□ 1.81
FAM3A-208ENST00000419205 SOX12O15370 315 aa26.35■■□□□ 1.81
FAM3A-208ENST00000419205 NLRP6P59044 892 aa26.34■■□□□ 1.81
FAM3A-208ENST00000419205 PDZRN3Q9UPQ7 1066 aa26.34■■□□□ 1.81
FAM3A-208ENST00000419205 IGSF1Q8N6C5 1336 aa26.33■■□□□ 1.81
FAM3A-208ENST00000419205 DCTN1Q14203 1278 aa26.33■■□□□ 1.81
FAM3A-208ENST00000419205 DDRGK1Q96HY6 314 aa26.33■■□□□ 1.81
FAM3A-208ENST00000419205 NPHP4O75161 1426 aaPredicted RBP26.33■■□□□ 1.81
FAM3A-208ENST00000419205 AMPHP49418 695 aa26.33■■□□□ 1.8
FAM3A-208ENST00000419205 C8orf58Q8NAV2 365 aa26.33■■□□□ 1.8
FAM3A-208ENST00000419205 PHF8Q9UPP1 1060 aa26.31■■□□□ 1.8
FAM3A-208ENST00000419205 CHL1O00533 1208 aa26.3■■□□□ 1.8
FAM3A-208ENST00000419205 CHMP4BQ9H444 224 aaKnown RBP26.3■■□□□ 1.8
FAM3A-208ENST00000419205 KIAA0232Q92628 1395 aa26.3■■□□□ 1.8
FAM3A-208ENST00000419205 NWD1Q149M9 1564 aa26.29■■□□□ 1.8
FAM3A-208ENST00000419205 CRB1P82279 1406 aa26.29■■□□□ 1.8
FAM3A-208ENST00000419205 HAP1P54257 671 aaPredicted RBP26.29■■□□□ 1.8
FAM3A-208ENST00000419205 ABCC4O15439 1325 aa26.29■■□□□ 1.8
FAM3A-208ENST00000419205 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
FAM3A-208ENST00000419205 ABTB2Q8N961 1025 aa26.28■■□□□ 1.8
FAM3A-208ENST00000419205 EYA1Q99502 592 aa26.28■■□□□ 1.8
FAM3A-208ENST00000419205 ELL2O00472 640 aaPredicted RBP26.27■■□□□ 1.8
FAM3A-208ENST00000419205 HOXC9P31274 260 aa26.26■■□□□ 1.79
FAM3A-208ENST00000419205 SMC5Q8IY18 1101 aa26.26■■□□□ 1.79
FAM3A-208ENST00000419205 LTN1O94822 1766 aa26.26■■□□□ 1.79
FAM3A-208ENST00000419205 MCM10Q7L590 875 aa26.25■■□□□ 1.79
FAM3A-208ENST00000419205 API5Q9BZZ5 524 aaKnown RBP26.25■■□□□ 1.79
FAM3A-208ENST00000419205 LRRC37A3O60309 1634 aa26.25■■□□□ 1.79
FAM3A-208ENST00000419205 MTHFSDQ2M296 383 aaKnown RBP26.24■■□□□ 1.79
FAM3A-208ENST00000419205 GAS2L2Q8NHY3 880 aa26.24■■□□□ 1.79
FAM3A-208ENST00000419205 ZBTB7BO15156 539 aaPredicted RBP26.23■■□□□ 1.79
FAM3A-208ENST00000419205 NFAT5O94916 1531 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms