RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 IL13P35225 146 aa17.79■□□□□ 0.44
RCC1-206ENST00000419074 PNISRQ8TF01 805 aaKnown RBP17.79■□□□□ 0.44
RCC1-206ENST00000419074 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
RCC1-206ENST00000419074 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
RCC1-206ENST00000419074 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
RCC1-206ENST00000419074 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
RCC1-206ENST00000419074 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
RCC1-206ENST00000419074 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
RCC1-206ENST00000419074 ANKRD24Q8TF21 1146 aa17.76■□□□□ 0.43
RCC1-206ENST00000419074 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
RCC1-206ENST00000419074 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
RCC1-206ENST00000419074 EVA1CP58658 441 aa17.74■□□□□ 0.43
RCC1-206ENST00000419074 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
RCC1-206ENST00000419074 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
RCC1-206ENST00000419074 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
RCC1-206ENST00000419074 U2AF1L5P0DN76 240 aaPredicted RBP17.73■□□□□ 0.43
RCC1-206ENST00000419074 U2AF1Q01081 240 aaKnown RBP eCLIP17.73■□□□□ 0.43
RCC1-206ENST00000419074 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
RCC1-206ENST00000419074 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
RCC1-206ENST00000419074 ADAMTS8Q9UP79 889 aa17.73■□□□□ 0.43
RCC1-206ENST00000419074 SHPRHQ149N8 1683 aa17.73■□□□□ 0.43
RCC1-206ENST00000419074 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
RCC1-206ENST00000419074 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
RCC1-206ENST00000419074 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
RCC1-206ENST00000419074 EYA1Q99502 592 aa17.72■□□□□ 0.43
RCC1-206ENST00000419074 ERBB3P21860 1342 aa17.72■□□□□ 0.43
RCC1-206ENST00000419074 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
RCC1-206ENST00000419074 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
RCC1-206ENST00000419074 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
RCC1-206ENST00000419074 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
RCC1-206ENST00000419074 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
RCC1-206ENST00000419074 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
RCC1-206ENST00000419074 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 ABCC6O95255 1503 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 FCHSD2O94868 740 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 LRP6O75581 1613 aa17.69■□□□□ 0.42
RCC1-206ENST00000419074 CAMTA1Q9Y6Y1 1673 aa17.68■□□□□ 0.42
RCC1-206ENST00000419074 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
RCC1-206ENST00000419074 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
RCC1-206ENST00000419074 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
RCC1-206ENST00000419074 HMOX1P09601 288 aa17.67■□□□□ 0.42
RCC1-206ENST00000419074 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
RCC1-206ENST00000419074 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
RCC1-206ENST00000419074 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
RCC1-206ENST00000419074 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
RCC1-206ENST00000419074 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
RCC1-206ENST00000419074 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
RCC1-206ENST00000419074 AEBP1Q8IUX7 1158 aa17.65■□□□□ 0.42
RCC1-206ENST00000419074 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
RCC1-206ENST00000419074 USP21Q9UK80 565 aa17.65■□□□□ 0.42
RCC1-206ENST00000419074 SLIT2O94813 1529 aa17.65■□□□□ 0.42
RCC1-206ENST00000419074 COL18A1P39060 1754 aa17.64■□□□□ 0.41
RCC1-206ENST00000419074 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
RCC1-206ENST00000419074 RUNDC1Q96C34 613 aa17.63■□□□□ 0.41
RCC1-206ENST00000419074 AFF2P51816 1311 aa17.63■□□□□ 0.41
RCC1-206ENST00000419074 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
RCC1-206ENST00000419074 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
RCC1-206ENST00000419074 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
RCC1-206ENST00000419074 VPS72Q15906 364 aa17.62■□□□□ 0.41
RCC1-206ENST00000419074 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
RCC1-206ENST00000419074 LTN1O94822 1766 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 NEFMP07197 916 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 KDRP35968 1356 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 CRB1P82279 1406 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
RCC1-206ENST00000419074 RAPGEF4Q8WZA2 1011 aa17.6■□□□□ 0.41
RCC1-206ENST00000419074 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
RCC1-206ENST00000419074 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
RCC1-206ENST00000419074 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
RCC1-206ENST00000419074 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
RCC1-206ENST00000419074 THRAP3Q9Y2W1 955 aaKnown RBP17.59■□□□□ 0.41
RCC1-206ENST00000419074 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
RCC1-206ENST00000419074 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
RCC1-206ENST00000419074 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
RCC1-206ENST00000419074 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
RCC1-206ENST00000419074 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
RCC1-206ENST00000419074 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
RCC1-206ENST00000419074 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
RCC1-206ENST00000419074 PLEKHO1Q53GL0 409 aaPredicted RBP17.57■□□□□ 0.4
RCC1-206ENST00000419074 ZNF772Q68DY9 489 aaPredicted RBP17.57■□□□□ 0.4
RCC1-206ENST00000419074 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
RCC1-206ENST00000419074 APAF1O14727 1248 aa17.56■□□□□ 0.4
RCC1-206ENST00000419074 IL2RBP14784 551 aa17.56■□□□□ 0.4
RCC1-206ENST00000419074 AMOTQ4VCS5 1084 aa17.55■□□□□ 0.4
RCC1-206ENST00000419074 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
RCC1-206ENST00000419074 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
RCC1-206ENST00000419074 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
RCC1-206ENST00000419074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
RCC1-206ENST00000419074 MTHFSDQ2M296 383 aaKnown RBP17.54■□□□□ 0.4
RCC1-206ENST00000419074 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
RCC1-206ENST00000419074 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
RCC1-206ENST00000419074 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
RCC1-206ENST00000419074 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
RCC1-206ENST00000419074 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
RCC1-206ENST00000419074 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
RCC1-206ENST00000419074 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
RCC1-206ENST00000419074 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms