RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 GNAI3P08754 354 aa20.63■□□□□ 0.89
SYNGAP1-202ENST00000418600 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.898e-7■■■■□ 22
SYNGAP1-202ENST00000418600 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
SYNGAP1-202ENST00000418600 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
SYNGAP1-202ENST00000418600 KCNA6P17658 529 aa20.63■□□□□ 0.89
SYNGAP1-202ENST00000418600 ANO2Q9NQ90 1003 aa20.63■□□□□ 0.89
SYNGAP1-202ENST00000418600 CPLX1O14810 134 aa20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 GPATCH8Q9UKJ3 1502 aaKnown RBP20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 TRAPPC8Q9Y2L5 1435 aa20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 TWISTNBQ3B726 338 aaPredicted RBP20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 TMEM132AQ24JP5 1023 aa20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 RALYLQ86SE5 291 aaKnown RBP20.62■□□□□ 0.89
SYNGAP1-202ENST00000418600 ZKSCAN1P17029 563 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 PTMSP20962 102 aa20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 RNF20Q5VTR2 975 aa20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 BTG4Q9NY30 223 aa20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 SF3A1Q15459 793 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 ERC1Q8IUD2 1116 aa20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 CREBRFQ8IUR6 639 aa20.61■□□□□ 0.89
SYNGAP1-202ENST00000418600 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
SYNGAP1-202ENST00000418600 CCDC7Q96M83 1385 aa20.6■□□□□ 0.89
SYNGAP1-202ENST00000418600 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
SYNGAP1-202ENST00000418600 TPM4P67936 248 aa20.59■□□□□ 0.89
SYNGAP1-202ENST00000418600 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
SYNGAP1-202ENST00000418600 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
SYNGAP1-202ENST00000418600 NAIPQ13075 1403 aa20.59■□□□□ 0.89
SYNGAP1-202ENST00000418600 RXRBP28702 533 aa20.59■□□□□ 0.89
SYNGAP1-202ENST00000418600 C6orf229H3BNL8 230 aa20.58■□□□□ 0.89
SYNGAP1-202ENST00000418600 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
SYNGAP1-202ENST00000418600 IL2RBP14784 551 aa20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 CDCA7Q9BWT1 371 aaPredicted RBP20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 R3HCC1Q9Y3T6 440 aaKnown RBP20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 SART3Q15020 963 aaKnown RBP20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 RAI14Q9P0K7 980 aa20.58■□□□□ 0.88
SYNGAP1-202ENST00000418600 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 TCP11L2Q8N4U5 519 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 SLAIN2Q9P270 581 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 TSPOAP1O95153 1857 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 TTC21AQ8NDW8 1320 aa20.57■□□□□ 0.88
SYNGAP1-202ENST00000418600 NEO1Q92859 1461 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 APBA3O96018 575 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 SRCIN1Q9C0H9 1055 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 CSPP1Q1MSJ5 1256 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 DRC7Q8IY82 874 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 NINLQ9Y2I6 1382 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 ST18O60284 1047 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 FSD1Q9BTV5 496 aa20.56■□□□□ 0.88
SYNGAP1-202ENST00000418600 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-202ENST00000418600 MYO1BO43795 1136 aa20.55■□□□□ 0.88
SYNGAP1-202ENST00000418600 CLASRPQ8N2M8 674 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-202ENST00000418600 NAP1L5Q96NT1 182 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-202ENST00000418600 COG6Q9Y2V7 657 aa20.54■□□□□ 0.88
SYNGAP1-202ENST00000418600 SIL1Q9H173 461 aa20.54■□□□□ 0.88
SYNGAP1-202ENST00000418600 WWC3Q9ULE0 1092 aa20.54■□□□□ 0.88
SYNGAP1-202ENST00000418600 SURF6O75683 361 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-202ENST00000418600 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 NACAP1Q9BZK3 213 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 ZSCAN25Q6NSZ9 544 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 CRACR2BQ8N4Y2 399 aaPredicted RBP20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 CCDC47Q96A33 483 aaKnown RBP20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 CEP89Q96ST8 783 aa20.53■□□□□ 0.88
SYNGAP1-202ENST00000418600 GPR162Q16538 588 aa20.52■□□□□ 0.88
SYNGAP1-202ENST00000418600 FCHSD2O94868 740 aa20.52■□□□□ 0.88
SYNGAP1-202ENST00000418600 TBX22Q9Y458 520 aa20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 MCTP1Q6DN14 999 aa20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 NF2P35240 595 aa20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
SYNGAP1-202ENST00000418600 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 MSNP26038 577 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 SLF2Q8IX21 1173 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 GNAI2P04899 355 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 METTL24Q5JXM2 366 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 QTRT2Q9H974 415 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 LRP2BPQ9P2M1 347 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
SYNGAP1-202ENST00000418600 CEP126Q9P2H0 1117 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 JDP2Q8WYK2 163 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 TPD52L1Q16890 204 aaPredicted RBP20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 MYD88Q99836 296 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
SYNGAP1-202ENST00000418600 C11orf95C9JLR9 678 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms