RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
RFC4-204ENST00000417876 NCOA4Q13772 614 aa9.24□□□□□ -0.93
RFC4-204ENST00000417876 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
RFC4-204ENST00000417876 KCTD17Q8N5Z5 321 aa9.24□□□□□ -0.93
RFC4-204ENST00000417876 CCDC85AQ96PX6 553 aaPredicted RBP9.24□□□□□ -0.93
RFC4-204ENST00000417876 HCSTQ9UBK5 93 aa9.24□□□□□ -0.93
RFC4-204ENST00000417876 MKRN1Q9UHC7 482 aaKnown RBP9.24□□□□□ -0.93
RFC4-204ENST00000417876 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
RFC4-204ENST00000417876 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
RFC4-204ENST00000417876 BPHLQ86WA6 291 aaPredicted RBP9.23□□□□□ -0.93
RFC4-204ENST00000417876 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
RFC4-204ENST00000417876 AGERQ15109 404 aa9.22□□□□□ -0.93
RFC4-204ENST00000417876 C1QTNF2Q9BXJ5 285 aa9.22□□□□□ -0.93
RFC4-204ENST00000417876 SKOR1P84550 965 aa9.21□□□□□ -0.94
RFC4-204ENST00000417876 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
RFC4-204ENST00000417876 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
RFC4-204ENST00000417876 PDE4CQ08493 712 aa9.2□□□□□ -0.94
RFC4-204ENST00000417876 TMEM164Q5U3C3 297 aa9.2□□□□□ -0.94
RFC4-204ENST00000417876 ZNF592Q92610 1267 aa9.2□□□□□ -0.94
RFC4-204ENST00000417876 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
RFC4-204ENST00000417876 TRIM32Q13049 653 aa9.19□□□□□ -0.94
RFC4-204ENST00000417876 PTK7Q13308 1070 aa9.19□□□□□ -0.94
RFC4-204ENST00000417876 MAP7D1Q3KQU3 841 aa9.19□□□□□ -0.94
RFC4-204ENST00000417876 PPP1R18Q6NYC8 613 aa9.19□□□□□ -0.94
RFC4-204ENST00000417876 ANKLE1Q8NAG6 615 aa9.19□□□□□ -0.94
RFC4-204ENST00000417876 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
RFC4-204ENST00000417876 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 ESPNB1AK53 854 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L21D6R901 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 CLDN10P78369 228 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 EMID1Q96A84 441 aaPredicted RBP9.18□□□□□ -0.94
RFC4-204ENST00000417876 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
RFC4-204ENST00000417876 LZTS3O60299 673 aaPredicted RBP9.17□□□□□ -0.94
RFC4-204ENST00000417876 BRD1O95696 1058 aa9.17□□□□□ -0.94
RFC4-204ENST00000417876 RASA1P20936 1047 aa9.17□□□□□ -0.94
RFC4-204ENST00000417876 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
RFC4-204ENST00000417876 ATP5J2-PTCD1G3V325 749 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 ZBTB7BO15156 539 aaPredicted RBP9.16□□□□□ -0.94
RFC4-204ENST00000417876 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
RFC4-204ENST00000417876 DKK1O94907 266 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 EML3Q32P44 896 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 SLC10A4Q96EP9 437 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
RFC4-204ENST00000417876 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
RFC4-204ENST00000417876 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
RFC4-204ENST00000417876 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
RFC4-204ENST00000417876 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
RFC4-204ENST00000417876 LARP1Q6PKG0 1096 aaKnown RBP9.14□□□□□ -0.95
RFC4-204ENST00000417876 LIAT1Q6ZQX7 453 aa9.14□□□□□ -0.95
RFC4-204ENST00000417876 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
RFC4-204ENST00000417876 DPYDQ12882 1025 aa9.13□□□□□ -0.95
RFC4-204ENST00000417876 PHLDB3Q6NSJ2 640 aa9.13□□□□□ -0.95
RFC4-204ENST00000417876 ANKMY2Q8IV38 441 aa9.13□□□□□ -0.95
RFC4-204ENST00000417876 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
RFC4-204ENST00000417876 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
RFC4-204ENST00000417876 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
RFC4-204ENST00000417876 GGCXP38435 758 aa9.12□□□□□ -0.95
RFC4-204ENST00000417876 RPIAP49247 311 aa9.12□□□□□ -0.95
RFC4-204ENST00000417876 WNT7BP56706 349 aa9.12□□□□□ -0.95
RFC4-204ENST00000417876 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
RFC4-204ENST00000417876 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
RFC4-204ENST00000417876 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
RFC4-204ENST00000417876 RAB15P59190 212 aa9.11□□□□□ -0.95
RFC4-204ENST00000417876 KCNA1Q09470 495 aa9.11□□□□□ -0.95
RFC4-204ENST00000417876 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
RFC4-204ENST00000417876 FAM200AQ8TCP9 573 aa9.11□□□□□ -0.95
RFC4-204ENST00000417876 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
RFC4-204ENST00000417876 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
RFC4-204ENST00000417876 GTF2IP78347 998 aa9.1□□□□□ -0.95
RFC4-204ENST00000417876 INTS6LQ5JSJ4 861 aaKnown RBP9.1□□□□□ -0.95
RFC4-204ENST00000417876 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
RFC4-204ENST00000417876 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 GRM5P41594 1212 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 SCTRP47872 440 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
RFC4-204ENST00000417876 MAP4K5Q9Y4K4 846 aa9.09□□□□□ -0.95
RFC4-204ENST00000417876 SIAH2O43255 324 aa9.08□□□□□ -0.96
RFC4-204ENST00000417876 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
RFC4-204ENST00000417876 SIX5Q8N196 739 aa9.08□□□□□ -0.96
RFC4-204ENST00000417876 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
RFC4-204ENST00000417876 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
RFC4-204ENST00000417876 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
RFC4-204ENST00000417876 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
RFC4-204ENST00000417876 SSFA2P28290 1259 aa9.07□□□□□ -0.96
RFC4-204ENST00000417876 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms