RNA–Protein interactions for RNA: ENST00000415906.1

LPP-202, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 2

Gene LPP, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-202ENST00000415906 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
LPP-202ENST00000415906 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
LPP-202ENST00000415906 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
LPP-202ENST00000415906 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
LPP-202ENST00000415906 EP400Q96L91 3159 aa12.51□□□□□ -0.41
LPP-202ENST00000415906 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
LPP-202ENST00000415906 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
LPP-202ENST00000415906 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
LPP-202ENST00000415906 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
LPP-202ENST00000415906 TULP4Q9NRJ4 1543 aa12.5□□□□□ -0.41
LPP-202ENST00000415906 EIF3AQ14152 1382 aaKnown RBP12.49□□□□□ -0.41
LPP-202ENST00000415906 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
LPP-202ENST00000415906 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
LPP-202ENST00000415906 MARF1Q9Y4F3 1742 aaKnown RBP12.48□□□□□ -0.41
LPP-202ENST00000415906 VPS72Q15906 364 aa12.48□□□□□ -0.41
LPP-202ENST00000415906 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
LPP-202ENST00000415906 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
LPP-202ENST00000415906 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
LPP-202ENST00000415906 GLI3P10071 1580 aa12.47□□□□□ -0.41
LPP-202ENST00000415906 ATP7BP35670 1465 aa12.46□□□□□ -0.41
LPP-202ENST00000415906 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
LPP-202ENST00000415906 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.41
LPP-202ENST00000415906 BTG4Q9NY30 223 aa12.46□□□□□ -0.41
LPP-202ENST00000415906 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
LPP-202ENST00000415906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■□□□□ 10.8
LPP-202ENST00000415906 TRPM3Q9HCF6 1732 aaPredicted RBP12.45□□□□□ -0.42
LPP-202ENST00000415906 ACEP12821 1306 aa12.44□□□□□ -0.42
LPP-202ENST00000415906 NEUROD1Q13562 356 aa12.44□□□□□ -0.42
LPP-202ENST00000415906 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
LPP-202ENST00000415906 ABCA3Q99758 1704 aa12.43□□□□□ -0.42
LPP-202ENST00000415906 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.43□□□□□ -0.42
LPP-202ENST00000415906 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
LPP-202ENST00000415906 CENPJQ9HC77 1338 aaPredicted RBP12.42□□□□□ -0.42
LPP-202ENST00000415906 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 A0A0G2JS52 829 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
LPP-202ENST00000415906 MYT1Q01538 1121 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 CHRNA2Q15822 529 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
LPP-202ENST00000415906 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
LPP-202ENST00000415906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
LPP-202ENST00000415906 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
LPP-202ENST00000415906 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
LPP-202ENST00000415906 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
LPP-202ENST00000415906 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
LPP-202ENST00000415906 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
LPP-202ENST00000415906 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
LPP-202ENST00000415906 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
LPP-202ENST00000415906 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.43
LPP-202ENST00000415906 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
LPP-202ENST00000415906 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
LPP-202ENST00000415906 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
LPP-202ENST00000415906 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
LPP-202ENST00000415906 SPATA31A5Q5VU36 1347 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 SPATA31A7Q8IWB4 1347 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
LPP-202ENST00000415906 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
LPP-202ENST00000415906 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 CABP1Q9NZU7 370 aa12.38□□□□□ -0.43
LPP-202ENST00000415906 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
LPP-202ENST00000415906 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
LPP-202ENST00000415906 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
LPP-202ENST00000415906 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
LPP-202ENST00000415906 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
LPP-202ENST00000415906 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
LPP-202ENST00000415906 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
LPP-202ENST00000415906 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
LPP-202ENST00000415906 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
LPP-202ENST00000415906 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
LPP-202ENST00000415906 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
LPP-202ENST00000415906 USP35Q9P2H5 1018 aa12.35□□□□□ -0.43
LPP-202ENST00000415906 SPATA31A1Q5TZJ5 1347 aa12.35□□□□□ -0.43
LPP-202ENST00000415906 GCP02774 474 aa12.34□□□□□ -0.43
LPP-202ENST00000415906 EVA1CP58658 441 aa12.34□□□□□ -0.43
LPP-202ENST00000415906 USP19O94966 1318 aa12.34□□□□□ -0.43
LPP-202ENST00000415906 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 RGL2O15211 777 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 SOX12O15370 315 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 LARP1Q6PKG0 1096 aaKnown RBP12.33□□□□□ -0.44
LPP-202ENST00000415906 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
LPP-202ENST00000415906 NLRP6P59044 892 aa12.32□□□□□ -0.44
LPP-202ENST00000415906 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
LPP-202ENST00000415906 PHRF1Q9P1Y6 1649 aaKnown RBP12.32□□□□□ -0.44
LPP-202ENST00000415906 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
LPP-202ENST00000415906 USP6P35125 1406 aa12.31□□□□□ -0.44
LPP-202ENST00000415906 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
LPP-202ENST00000415906 CPDO75976 1380 aa12.3□□□□□ -0.44
LPP-202ENST00000415906 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
LPP-202ENST00000415906 TRPM1Q7Z4N2 1603 aa12.3□□□□□ -0.44
LPP-202ENST00000415906 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
LPP-202ENST00000415906 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
LPP-202ENST00000415906 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
LPP-202ENST00000415906 BAG6P46379 1132 aa12.29□□□□□ -0.44
LPP-202ENST00000415906 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms