RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 LARP1Q6PKG0 1096 aaKnown RBP34.88■■■■□ 3.17
CPNE1-207ENST00000414664 SEPT12Q8IYM1 358 aa34.88■■■■□ 3.17
CPNE1-207ENST00000414664 AXIN2Q9Y2T1 843 aa34.88■■■■□ 3.17
CPNE1-207ENST00000414664 ABCC6O95255 1503 aa34.87■■■■□ 3.17
CPNE1-207ENST00000414664 FAM98CQ17RN3 349 aaKnown RBP34.87■■■■□ 3.17
CPNE1-207ENST00000414664 PANK3Q9H999 370 aa34.87■■■■□ 3.17
CPNE1-207ENST00000414664 CGNL1Q0VF96 1302 aa34.86■■■■□ 3.17
CPNE1-207ENST00000414664 KIF20BQ96Q89 1820 aa34.86■■■■□ 3.17
CPNE1-207ENST00000414664 A0A0G2JS52 829 aa34.85■■■■□ 3.17
CPNE1-207ENST00000414664 MYT1Q01538 1121 aa34.85■■■■□ 3.17
CPNE1-207ENST00000414664 USP35Q9P2H5 1018 aa34.83■■■■□ 3.17
CPNE1-207ENST00000414664 LTN1O94822 1766 aa34.82■■■■□ 3.17
CPNE1-207ENST00000414664 CRB1P82279 1406 aa34.81■■■■□ 3.16
CPNE1-207ENST00000414664 TCP11L2Q8N4U5 519 aa34.81■■■■□ 3.16
CPNE1-207ENST00000414664 THRAP3Q9Y2W1 955 aaKnown RBP34.81■■■■□ 3.16
CPNE1-207ENST00000414664 WDR17Q8IZU2 1322 aa34.81■■■■□ 3.16
CPNE1-207ENST00000414664 CSB-PGBD3P0DP91 1061 aa34.8■■■■□ 3.16
CPNE1-207ENST00000414664 TOM1L2Q6ZVM7 507 aa34.8■■■■□ 3.16
CPNE1-207ENST00000414664 BARGINQ6ZT62 677 aa34.79■■■■□ 3.16
CPNE1-207ENST00000414664 RGPD5Q99666 1765 aa34.78■■■■□ 3.16
CPNE1-207ENST00000414664 IP6K1Q92551 441 aa34.76■■■■□ 3.16
CPNE1-207ENST00000414664 MAP3K19Q56UN5 1328 aa34.76■■■■□ 3.15
CPNE1-207ENST00000414664 AMPHP49418 695 aa34.75■■■■□ 3.15
CPNE1-207ENST00000414664 CCDC7Q96M83 1385 aa34.74■■■■□ 3.15
CPNE1-207ENST00000414664 BLMP54132 1417 aaPredicted RBP34.74■■■■□ 3.15
CPNE1-207ENST00000414664 KRT27Q7Z3Y8 459 aa34.74■■■■□ 3.15
CPNE1-207ENST00000414664 FBLN1P23142 703 aa34.73■■■■□ 3.15
CPNE1-207ENST00000414664 UPF1Q92900 1129 aaKnown RBP eCLIP34.73■■■■□ 3.15
CPNE1-207ENST00000414664 KNSTRNQ9Y448 316 aa34.73■■■■□ 3.15
CPNE1-207ENST00000414664 BRWD3Q6RI45 1802 aa34.72■■■■□ 3.15
CPNE1-207ENST00000414664 CARD10Q9BWT7 1032 aa34.72■■■■□ 3.15
CPNE1-207ENST00000414664 THSD7AQ9UPZ6 1657 aa34.71■■■■□ 3.15
CPNE1-207ENST00000414664 ERBB3P21860 1342 aa34.71■■■■□ 3.15
CPNE1-207ENST00000414664 WASHC2AQ641Q2 1341 aa34.71■■■■□ 3.15
CPNE1-207ENST00000414664 ANKRD24Q8TF21 1146 aa34.7■■■■□ 3.15
CPNE1-207ENST00000414664 HOXC9P31274 260 aa34.69■■■■□ 3.14
CPNE1-207ENST00000414664 RRS1Q15050 365 aaKnown RBP34.69■■■■□ 3.14
CPNE1-207ENST00000414664 RTL1A6NKG5 1358 aa34.69■■■■□ 3.14
CPNE1-207ENST00000414664 NSD2O96028 1365 aa34.69■■■■□ 3.14
CPNE1-207ENST00000414664 ZEB1P37275 1124 aaPredicted RBP34.67■■■■□ 3.14
CPNE1-207ENST00000414664 CDCA7Q9BWT1 371 aaPredicted RBP34.65■■■■□ 3.14
CPNE1-207ENST00000414664 NLRP2Q9NX02 1062 aa34.65■■■■□ 3.14
CPNE1-207ENST00000414664 KIF24Q5T7B8 1368 aa34.64■■■■□ 3.14
CPNE1-207ENST00000414664 ANKRD26Q9UPS8 1709 aa34.64■■■■□ 3.14
CPNE1-207ENST00000414664 PDE3BQ13370 1112 aa34.62■■■■□ 3.13
CPNE1-207ENST00000414664 LTV1Q96GA3 475 aaPredicted RBP34.62■■■■□ 3.13
CPNE1-207ENST00000414664 CCDC125Q86Z20 511 aa34.6■■■■□ 3.13
CPNE1-207ENST00000414664 FLT4P35916 1363 aa34.6■■■■□ 3.13
CPNE1-207ENST00000414664 MORC1Q86VD1 984 aa34.58■■■■□ 3.13
CPNE1-207ENST00000414664 PARP4Q9UKK3 1724 aaKnown RBP34.57■■■■□ 3.12
CPNE1-207ENST00000414664 PER1O15534 1290 aaPredicted RBP34.56■■■■□ 3.12
CPNE1-207ENST00000414664 TNNT2P45379 298 aaPredicted RBP34.56■■■■□ 3.12
CPNE1-207ENST00000414664 AMER1Q5JTC6 1135 aaPredicted RBP34.56■■■■□ 3.12
CPNE1-207ENST00000414664 EMILIN1Q9Y6C2 1016 aa34.56■■■■□ 3.12
CPNE1-207ENST00000414664 INSRP06213 1382 aa34.56■■■■□ 3.12
CPNE1-207ENST00000414664 FAM208AQ9UK61 1670 aaKnown RBP34.56■■■■□ 3.12
CPNE1-207ENST00000414664 SMG6Q86US8 1419 aaKnown RBP34.55■■■■□ 3.12
CPNE1-207ENST00000414664 PPM1GO15355 546 aaPredicted RBP34.55■■■■□ 3.12
CPNE1-207ENST00000414664 DDB1Q16531 1140 aa34.55■■■■□ 3.12
CPNE1-207ENST00000414664 HSP90AB2PQ58FF8 381 aa34.54■■■■□ 3.12
CPNE1-207ENST00000414664 MAP2P11137 1827 aaKnown RBP34.53■■■■□ 3.12
CPNE1-207ENST00000414664 POLKQ9UBT6 870 aa34.53■■■■□ 3.12
CPNE1-207ENST00000414664 WNK3Q9BYP7 1800 aa34.53■■■■□ 3.12
CPNE1-207ENST00000414664 FAM196AQ6ZSG2 479 aa34.52■■■■□ 3.12
CPNE1-207ENST00000414664 DISP2A7MBM2 1401 aa34.51■■■■□ 3.12
CPNE1-207ENST00000414664 FAM182BQ5T319 152 aa34.51■■■■□ 3.12
CPNE1-207ENST00000414664 PEAK1Q9H792 1746 aa34.51■■■■□ 3.12
CPNE1-207ENST00000414664 IL2RBP14784 551 aa34.5■■■■□ 3.11
CPNE1-207ENST00000414664 EXOC5O00471 708 aa34.49■■■■□ 3.11
CPNE1-207ENST00000414664 SF3B2Q13435 895 aaKnown RBP34.49■■■■□ 3.11
CPNE1-207ENST00000414664 LRRC37A3O60309 1634 aa34.47■■■■□ 3.11
CPNE1-207ENST00000414664 EP400Q96L91 3159 aa34.45■■■■□ 3.11
CPNE1-207ENST00000414664 NPC1L1Q9UHC9 1359 aa34.45■■■■□ 3.11
CPNE1-207ENST00000414664 CC2D1BQ5T0F9 858 aaKnown RBP34.43■■■■□ 3.1
CPNE1-207ENST00000414664 NBPF6Q5VWK0 638 aa34.43■■■■□ 3.1
CPNE1-207ENST00000414664 NBPF4Q96M43 638 aa34.43■■■■□ 3.1
CPNE1-207ENST00000414664 RGPD2P0DJD1 1756 aa34.4■■■■□ 3.1
CPNE1-207ENST00000414664 OVOS2A0A0G2JMS6 1433 aa34.39■■■■□ 3.1
CPNE1-207ENST00000414664 TNS2Q63HR2 1409 aa34.39■■■■□ 3.1
CPNE1-207ENST00000414664 MARCH10Q8NA82 808 aaPredicted RBP34.37■■■■□ 3.09
CPNE1-207ENST00000414664 USHBP1Q8N6Y0 703 aa34.35■■■■□ 3.09
CPNE1-207ENST00000414664 RAPGEF4Q8WZA2 1011 aa34.35■■■■□ 3.09
CPNE1-207ENST00000414664 RGPD1P0DJD0 1748 aa34.35■■■■□ 3.09
CPNE1-207ENST00000414664 TRIM37O94972 964 aa34.34■■■■□ 3.09
CPNE1-207ENST00000414664 BAG6P46379 1132 aa34.33■■■■□ 3.09
CPNE1-207ENST00000414664 CNGB1Q14028 1251 aaPredicted RBP34.32■■■■□ 3.08
CPNE1-207ENST00000414664 EIF4A2Q14240 407 aaKnown RBP34.32■■■■□ 3.08
CPNE1-207ENST00000414664 TATP17735 454 aaPredicted RBP34.31■■■■□ 3.08
CPNE1-207ENST00000414664 BCL9O00512 1426 aa34.3■■■■□ 3.08
CPNE1-207ENST00000414664 EYA1Q99502 592 aa34.3■■■■□ 3.08
CPNE1-207ENST00000414664 DEFB132Q7Z7B7 95 aa34.28■■■■□ 3.08
CPNE1-207ENST00000414664 ZCRB1Q8TBF4 217 aaKnown RBP34.28■■■■□ 3.08
CPNE1-207ENST00000414664 MEGF6O75095 1541 aa34.27■■■■□ 3.08
CPNE1-207ENST00000414664 MTHFSP49914 203 aa34.27■■■■□ 3.08
CPNE1-207ENST00000414664 NCAPD2Q15021 1401 aa34.25■■■■□ 3.07
CPNE1-207ENST00000414664 DDX54Q8TDD1 881 aaKnown RBP34.25■■■■□ 3.07
CPNE1-207ENST00000414664 APBA3O96018 575 aa34.24■■■■□ 3.07
CPNE1-207ENST00000414664 TNS1Q9HBL0 1735 aaKnown RBP34.23■■■■□ 3.07
CPNE1-207ENST00000414664 BCL11BQ9C0K0 894 aaPredicted RBP34.21■■■■□ 3.07
CPNE1-207ENST00000414664 SBF2Q86WG5 1849 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms