RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
DDB1-202ENST00000414411 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
DDB1-202ENST00000414411 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDB1-202ENST00000414411 SOX12O15370 315 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 MTHFSP49914 203 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
DDB1-202ENST00000414411 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
DDB1-202ENST00000414411 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
DDB1-202ENST00000414411 CPDO75976 1380 aa13.34□□□□□ -0.27
DDB1-202ENST00000414411 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
DDB1-202ENST00000414411 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
DDB1-202ENST00000414411 FKBP8Q14318 412 aa13.33□□□□□ -0.28
DDB1-202ENST00000414411 ZC3H6P61129 1189 aaKnown RBP13.33□□□□□ -0.28
DDB1-202ENST00000414411 LTN1O94822 1766 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 INSRP06213 1382 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 NEFLP07196 543 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
DDB1-202ENST00000414411 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
DDB1-202ENST00000414411 PEAK1Q9H792 1746 aa13.31□□□□□ -0.28
DDB1-202ENST00000414411 IP6K1Q92551 441 aa13.31□□□□□ -0.28
DDB1-202ENST00000414411 COL18A1P39060 1754 aa13.3□□□□□ -0.28
DDB1-202ENST00000414411 FAM83GA6ND36 823 aa13.3□□□□□ -0.28
DDB1-202ENST00000414411 HOXC9P31274 260 aa13.3□□□□□ -0.28
DDB1-202ENST00000414411 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
DDB1-202ENST00000414411 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
DDB1-202ENST00000414411 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
DDB1-202ENST00000414411 AMPHP49418 695 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 HSP90AB2PQ58FF8 381 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 FLT4P35916 1363 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
DDB1-202ENST00000414411 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
DDB1-202ENST00000414411 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
DDB1-202ENST00000414411 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
DDB1-202ENST00000414411 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
DDB1-202ENST00000414411 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
DDB1-202ENST00000414411 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
DDB1-202ENST00000414411 ABCC6O95255 1503 aa13.27□□□□□ -0.28
DDB1-202ENST00000414411 LRP6O75581 1613 aa13.27□□□□□ -0.28
DDB1-202ENST00000414411 ADAMTS2O95450 1211 aa13.27□□□□□ -0.29
DDB1-202ENST00000414411 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.29
DDB1-202ENST00000414411 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 CFAP53Q96M91 514 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
DDB1-202ENST00000414411 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
DDB1-202ENST00000414411 IL13P35225 146 aa13.25□□□□□ -0.29
DDB1-202ENST00000414411 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
DDB1-202ENST00000414411 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
DDB1-202ENST00000414411 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
DDB1-202ENST00000414411 PNISRQ8TF01 805 aaKnown RBP13.24□□□□□ -0.29
DDB1-202ENST00000414411 ERBB3P21860 1342 aa13.23□□□□□ -0.29
DDB1-202ENST00000414411 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
DDB1-202ENST00000414411 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
DDB1-202ENST00000414411 SLIT2O94813 1529 aa13.22□□□□□ -0.29
DDB1-202ENST00000414411 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
DDB1-202ENST00000414411 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.29
DDB1-202ENST00000414411 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.3
DDB1-202ENST00000414411 NGLY1Q96IV0 654 aa13.21□□□□□ -0.3
DDB1-202ENST00000414411 EYA1Q99502 592 aa13.21□□□□□ -0.3
DDB1-202ENST00000414411 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 C8orf37Q96NL8 207 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 RGPD1P0DJD0 1748 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
DDB1-202ENST00000414411 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
DDB1-202ENST00000414411 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
DDB1-202ENST00000414411 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
DDB1-202ENST00000414411 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
DDB1-202ENST00000414411 EVA1CP58658 441 aa13.18□□□□□ -0.3
DDB1-202ENST00000414411 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
DDB1-202ENST00000414411 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
DDB1-202ENST00000414411 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
DDB1-202ENST00000414411 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
DDB1-202ENST00000414411 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
DDB1-202ENST00000414411 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
DDB1-202ENST00000414411 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
DDB1-202ENST00000414411 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
DDB1-202ENST00000414411 KDRP35968 1356 aa13.17□□□□□ -0.3
DDB1-202ENST00000414411 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
DDB1-202ENST00000414411 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■■□□□ 11.4
DDB1-202ENST00000414411 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDB1-202ENST00000414411 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
DDB1-202ENST00000414411 FCHSD2O94868 740 aa13.16□□□□□ -0.3
DDB1-202ENST00000414411 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
DDB1-202ENST00000414411 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms