RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
C2CD3-204ENST00000414160 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
C2CD3-204ENST00000414160 ADGRB3O60242 1522 aa12.61□□□□□ -0.39
C2CD3-204ENST00000414160 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
C2CD3-204ENST00000414160 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
C2CD3-204ENST00000414160 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
C2CD3-204ENST00000414160 FYB1O15117 783 aa12.6□□□□□ -0.39
C2CD3-204ENST00000414160 COL3A1P02461 1466 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-204ENST00000414160 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-204ENST00000414160 ADAMTSL3P82987 1691 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 FER1L4A9Z1Z3 1794 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 RPGRIP1LQ68CZ1 1315 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
C2CD3-204ENST00000414160 VAMP4O75379 141 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 OFD1O75665 1012 aa12.59□□□□□ -0.39
C2CD3-204ENST00000414160 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
C2CD3-204ENST00000414160 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
C2CD3-204ENST00000414160 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.4
C2CD3-204ENST00000414160 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
C2CD3-204ENST00000414160 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
C2CD3-204ENST00000414160 CDC45O75419 566 aa12.58□□□□□ -0.4
C2CD3-204ENST00000414160 TSPYL6Q8N831 410 aa12.58□□□□□ -0.4
C2CD3-204ENST00000414160 GSPT1P15170 499 aaKnown RBP12.57□□□□□ -0.4
C2CD3-204ENST00000414160 ZNF445P59923 1031 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
C2CD3-204ENST00000414160 MCTP1Q6DN14 999 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 MED14O60244 1454 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 NPATQ14207 1427 aa12.57□□□□□ -0.4
C2CD3-204ENST00000414160 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 FCHSD2O94868 740 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 PKP1Q13835 747 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 MLECQ14165 292 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 CAVIN1Q6NZI2 390 aaKnown RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 LMBRD1Q9NUN5 540 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 MSNP26038 577 aaKnown RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
C2CD3-204ENST00000414160 STK26Q9P289 416 aa12.56□□□□□ -0.4
C2CD3-204ENST00000414160 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
C2CD3-204ENST00000414160 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
C2CD3-204ENST00000414160 PNPLA6Q8IY17 1366 aa12.55□□□□□ -0.4
C2CD3-204ENST00000414160 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
C2CD3-204ENST00000414160 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
C2CD3-204ENST00000414160 RABEP1Q15276 862 aa12.54□□□□□ -0.4
C2CD3-204ENST00000414160 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
C2CD3-204ENST00000414160 FBLN1P23142 703 aa12.54□□□□□ -0.4
C2CD3-204ENST00000414160 NUCB2P80303 420 aa12.54□□□□□ -0.4
C2CD3-204ENST00000414160 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
C2CD3-204ENST00000414160 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 ABCC4O15439 1325 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 PPLO60437 1756 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 PDLIM2Q96JY6 352 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
C2CD3-204ENST00000414160 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
C2CD3-204ENST00000414160 PTCH1Q13635 1447 aa12.52□□□□□ -0.4
C2CD3-204ENST00000414160 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.4
C2CD3-204ENST00000414160 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.41
C2CD3-204ENST00000414160 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
C2CD3-204ENST00000414160 TERF1P54274 439 aa12.52□□□□□ -0.41
C2CD3-204ENST00000414160 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
C2CD3-204ENST00000414160 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
C2CD3-204ENST00000414160 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
C2CD3-204ENST00000414160 ZDHHC9Q9Y397 364 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-204ENST00000414160 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
C2CD3-204ENST00000414160 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-204ENST00000414160 HMOX1P09601 288 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
C2CD3-204ENST00000414160 C3P01024 1663 aa12.51□□□□□ -0.41
C2CD3-204ENST00000414160 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
C2CD3-204ENST00000414160 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
C2CD3-204ENST00000414160 CHAMP1Q96JM3 812 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 GNAI1P63096 354 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
C2CD3-204ENST00000414160 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms