RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 TRDNQ13061 729 aa16.96■□□□□ 0.31
LINC00887-202ENST00000414120 SWT1Q5T5J6 900 aaKnown RBP16.96■□□□□ 0.31
LINC00887-202ENST00000414120 RASSF4Q9H2L5 321 aa16.96■□□□□ 0.31
LINC00887-202ENST00000414120 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
LINC00887-202ENST00000414120 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
LINC00887-202ENST00000414120 PPP1R12AO14974 1030 aaPredicted RBP16.95■□□□□ 0.3
LINC00887-202ENST00000414120 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
LINC00887-202ENST00000414120 CHMP5Q9NZZ3 219 aa16.95■□□□□ 0.3
LINC00887-202ENST00000414120 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
LINC00887-202ENST00000414120 SYCP1Q15431 976 aa16.95■□□□□ 0.3
LINC00887-202ENST00000414120 FAM135AQ9P2D6 1515 aa16.94■□□□□ 0.3
LINC00887-202ENST00000414120 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
LINC00887-202ENST00000414120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
LINC00887-202ENST00000414120 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
LINC00887-202ENST00000414120 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
LINC00887-202ENST00000414120 PANK3Q9H999 370 aa16.94■□□□□ 0.3
LINC00887-202ENST00000414120 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
LINC00887-202ENST00000414120 EIF2AK4Q9P2K8 1649 aaKnown RBP16.94■□□□□ 0.3
LINC00887-202ENST00000414120 NBPF3Q9H094 633 aa16.93■□□□□ 0.3
LINC00887-202ENST00000414120 PZPP20742 1482 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 KLHL33A6NCF5 533 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-202ENST00000414120 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-202ENST00000414120 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 SETDB1Q15047 1291 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 MKL1Q969V6 931 aa16.92■□□□□ 0.3
LINC00887-202ENST00000414120 ABCC3O15438 1527 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 CCDC189A1A4V9 331 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 MTA1Q13330 715 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
LINC00887-202ENST00000414120 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
LINC00887-202ENST00000414120 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 C11orf91Q3C1V1 193 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 GAS2L3Q86XJ1 694 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 STK26Q9P289 416 aa16.91■□□□□ 0.3
LINC00887-202ENST00000414120 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
LINC00887-202ENST00000414120 CEP152O94986 1710 aa16.9■□□□□ 0.3
LINC00887-202ENST00000414120 CLTCQ00610 1675 aaKnown RBP16.9■□□□□ 0.3
LINC00887-202ENST00000414120 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
LINC00887-202ENST00000414120 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
LINC00887-202ENST00000414120 MPNDQ8N594 471 aa16.9■□□□□ 0.3
LINC00887-202ENST00000414120 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
LINC00887-202ENST00000414120 RNF17Q9BXT8 1623 aaKnown RBP16.89■□□□□ 0.29
LINC00887-202ENST00000414120 NRDCO43847 1150 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 GSCP56915 257 aaPredicted RBP16.89■□□□□ 0.29
LINC00887-202ENST00000414120 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
LINC00887-202ENST00000414120 NPATQ14207 1427 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 UNC13BO14795 1591 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 CCDC91Q7Z6B0 441 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 JMYQ8N9B5 988 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 USP19O94966 1318 aa16.89■□□□□ 0.29
LINC00887-202ENST00000414120 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
LINC00887-202ENST00000414120 LIG1P18858 919 aa16.88■□□□□ 0.29
LINC00887-202ENST00000414120 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
LINC00887-202ENST00000414120 TSHZ1Q6ZSZ6 1077 aa16.88■□□□□ 0.29
LINC00887-202ENST00000414120 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
LINC00887-202ENST00000414120 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
LINC00887-202ENST00000414120 MUM1L1Q5H9M0 696 aa16.87■□□□□ 0.29
LINC00887-202ENST00000414120 BORCS6Q96GS4 357 aa16.87■□□□□ 0.29
LINC00887-202ENST00000414120 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
LINC00887-202ENST00000414120 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
LINC00887-202ENST00000414120 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
LINC00887-202ENST00000414120 PNISRQ8TF01 805 aaKnown RBP16.87■□□□□ 0.29
LINC00887-202ENST00000414120 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
LINC00887-202ENST00000414120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.87■□□□□ 0.29
LINC00887-202ENST00000414120 FER1L4A9Z1Z3 1794 aa16.86■□□□□ 0.29
LINC00887-202ENST00000414120 CASQ1P31415 396 aa16.86■□□□□ 0.29
LINC00887-202ENST00000414120 RAD51AP2Q09MP3 1159 aa16.86■□□□□ 0.29
LINC00887-202ENST00000414120 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
LINC00887-202ENST00000414120 PAIP2Q9BPZ3 127 aaKnown RBP16.86■□□□□ 0.29
LINC00887-202ENST00000414120 CXorf56Q9H5V9 222 aa16.86■□□□□ 0.29
LINC00887-202ENST00000414120 DDX41Q9UJV9 622 aaKnown RBP16.86■□□□□ 0.29
LINC00887-202ENST00000414120 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
LINC00887-202ENST00000414120 SUFUQ9UMX1 484 aa16.85■□□□□ 0.29
LINC00887-202ENST00000414120 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
LINC00887-202ENST00000414120 NLRP1Q9C000 1473 aa16.85■□□□□ 0.29
LINC00887-202ENST00000414120 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
LINC00887-202ENST00000414120 REC8O95072 547 aa16.84■□□□□ 0.29
LINC00887-202ENST00000414120 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
LINC00887-202ENST00000414120 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
LINC00887-202ENST00000414120 PTPRMP28827 1452 aa16.84■□□□□ 0.29
LINC00887-202ENST00000414120 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.29
LINC00887-202ENST00000414120 CTAGE5O15320 804 aa16.83■□□□□ 0.28
LINC00887-202ENST00000414120 U2AF2P26368 475 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00887-202ENST00000414120 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
LINC00887-202ENST00000414120 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
LINC00887-202ENST00000414120 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.28
LINC00887-202ENST00000414120 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
LINC00887-202ENST00000414120 NEFHP12036 1026 aa16.82■□□□□ 0.28
LINC00887-202ENST00000414120 IDI1Q13907 227 aa16.82■□□□□ 0.28
LINC00887-202ENST00000414120 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
LINC00887-202ENST00000414120 PAXBP1Q9Y5B6 917 aa16.82■□□□□ 0.28
LINC00887-202ENST00000414120 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms