RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 RLBP1P12271 317 aa22.57■■□□□ 1.2
CROCCP2-202ENST00000412962 PEAK1Q9H792 1746 aa22.57■■□□□ 1.2
CROCCP2-202ENST00000412962 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
CROCCP2-202ENST00000412962 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
CROCCP2-202ENST00000412962 SOX12O15370 315 aa22.56■■□□□ 1.2
CROCCP2-202ENST00000412962 PAK3O75914 559 aaPredicted RBP22.56■■□□□ 1.2
CROCCP2-202ENST00000412962 CHD2O14647 1828 aaKnown RBP22.56■■□□□ 1.2
CROCCP2-202ENST00000412962 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
CROCCP2-202ENST00000412962 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
CROCCP2-202ENST00000412962 DLG5Q8TDM6 1919 aa22.54■■□□□ 1.2
CROCCP2-202ENST00000412962 SETD1BQ9UPS6 1966 aaKnown RBP22.54■■□□□ 1.2
CROCCP2-202ENST00000412962 PDE4AP27815 886 aa22.54■■□□□ 1.2
CROCCP2-202ENST00000412962 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
CROCCP2-202ENST00000412962 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
CROCCP2-202ENST00000412962 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
CROCCP2-202ENST00000412962 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
CROCCP2-202ENST00000412962 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
CROCCP2-202ENST00000412962 NBR1Q14596 966 aa22.52■■□□□ 1.2
CROCCP2-202ENST00000412962 HSP90AB2PQ58FF8 381 aa22.51■■□□□ 1.19
CROCCP2-202ENST00000412962 CALD1Q05682 793 aaKnown RBP22.51■■□□□ 1.19
CROCCP2-202ENST00000412962 AEBP1Q8IUX7 1158 aa22.51■■□□□ 1.19
CROCCP2-202ENST00000412962 IGHDP01880 384 aa22.5■■□□□ 1.19
CROCCP2-202ENST00000412962 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
CROCCP2-202ENST00000412962 SULT6B1Q6IMI4 303 aa22.5■■□□□ 1.19
CROCCP2-202ENST00000412962 BACH2Q9BYV9 841 aa22.5■■□□□ 1.19
CROCCP2-202ENST00000412962 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
CROCCP2-202ENST00000412962 MAP3K19Q56UN5 1328 aa22.49■■□□□ 1.19
CROCCP2-202ENST00000412962 LMOD3Q0VAK6 560 aa22.49■■□□□ 1.19
CROCCP2-202ENST00000412962 DZIP1LQ8IYY4 767 aaKnown RBP22.49■■□□□ 1.19
CROCCP2-202ENST00000412962 RGPD1P0DJD0 1748 aa22.48■■□□□ 1.19
CROCCP2-202ENST00000412962 AAMPQ13685 434 aa22.48■■□□□ 1.19
CROCCP2-202ENST00000412962 RBM33Q96EV2 1170 aaKnown RBP22.47■■□□□ 1.19
CROCCP2-202ENST00000412962 IFT57Q9NWB7 429 aa22.47■■□□□ 1.19
CROCCP2-202ENST00000412962 MVPQ14764 893 aaKnown RBP22.47■■□□□ 1.19
CROCCP2-202ENST00000412962 TRIM27P14373 513 aa22.46■■□□□ 1.19
CROCCP2-202ENST00000412962 ANP32AP39687 249 aaKnown RBP22.46■■□□□ 1.19
CROCCP2-202ENST00000412962 GNAI1P63096 354 aa22.46■■□□□ 1.19
CROCCP2-202ENST00000412962 SBNO1A3KN83 1393 aa22.45■■□□□ 1.18
CROCCP2-202ENST00000412962 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
CROCCP2-202ENST00000412962 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
CROCCP2-202ENST00000412962 FLT4P35916 1363 aa22.45■■□□□ 1.18
CROCCP2-202ENST00000412962 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.18
CROCCP2-202ENST00000412962 NLRP6P59044 892 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 ATF7IPQ6VMQ6 1270 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 RGS3P49796 1198 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 ALDH1L2Q3SY69 923 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 MBIPQ9NS73 344 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 PCDHB15Q9Y5E8 787 aa22.44■■□□□ 1.18
CROCCP2-202ENST00000412962 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
CROCCP2-202ENST00000412962 MARF1Q9Y4F3 1742 aaKnown RBP22.43■■□□□ 1.18
CROCCP2-202ENST00000412962 DCTN1Q14203 1278 aa22.43■■□□□ 1.18
CROCCP2-202ENST00000412962 NUTM2GQ5VZR2 741 aa22.43■■□□□ 1.18
CROCCP2-202ENST00000412962 AMPHP49418 695 aa22.42■■□□□ 1.18
CROCCP2-202ENST00000412962 RTN4Q9NQC3 1192 aaKnown RBP22.42■■□□□ 1.18
CROCCP2-202ENST00000412962 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 ADGRL3Q9HAR2 1447 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 CFAP44Q96MT7 982 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 PHF8Q9UPP1 1060 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 ZNF428Q96B54 188 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
CROCCP2-202ENST00000412962 USP54Q70EL1 1684 aa22.4■■□□□ 1.18
CROCCP2-202ENST00000412962 ABTB2Q8N961 1025 aa22.4■■□□□ 1.18
CROCCP2-202ENST00000412962 IPO8O15397 1037 aaKnown RBP22.39■■□□□ 1.18
CROCCP2-202ENST00000412962 TSPYL6Q8N831 410 aa22.39■■□□□ 1.18
CROCCP2-202ENST00000412962 VAMP4O75379 141 aa22.39■■□□□ 1.17
CROCCP2-202ENST00000412962 ITPRIPQ8IWB1 547 aa22.39■■□□□ 1.17
CROCCP2-202ENST00000412962 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.38■■□□□ 1.17
CROCCP2-202ENST00000412962 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
CROCCP2-202ENST00000412962 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
CROCCP2-202ENST00000412962 ELL2O00472 640 aaPredicted RBP22.37■■□□□ 1.17
CROCCP2-202ENST00000412962 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
CROCCP2-202ENST00000412962 TMEM57Q8N5G2 664 aa22.36■■□□□ 1.17
CROCCP2-202ENST00000412962 BRPF1P55201 1214 aaPredicted RBP22.36■■□□□ 1.17
CROCCP2-202ENST00000412962 IL27Q8NEV9 243 aa22.36■■□□□ 1.17
CROCCP2-202ENST00000412962 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
CROCCP2-202ENST00000412962 TWISTNBQ3B726 338 aaPredicted RBP22.35■■□□□ 1.17
CROCCP2-202ENST00000412962 FAM161AQ3B820 660 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 MCM10Q7L590 875 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 C8orf58Q8NAV2 365 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 KDRP35968 1356 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 IGSF1Q8N6C5 1336 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 ESCO1Q5FWF5 840 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 MRPL50Q8N5N7 158 aaKnown RBP22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 EYA1Q99502 592 aa22.34■■□□□ 1.17
CROCCP2-202ENST00000412962 HOXC9P31274 260 aa22.33■■□□□ 1.17
CROCCP2-202ENST00000412962 KIF24Q5T7B8 1368 aa22.33■■□□□ 1.17
CROCCP2-202ENST00000412962 C8orf34Q49A92 452 aa22.33■■□□□ 1.16
CROCCP2-202ENST00000412962 NWD1Q149M9 1564 aa22.32■■□□□ 1.16
CROCCP2-202ENST00000412962 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
CROCCP2-202ENST00000412962 FOXO3O43524 673 aa22.3■■□□□ 1.16
CROCCP2-202ENST00000412962 PSME1Q06323 249 aa22.3■■□□□ 1.16
CROCCP2-202ENST00000412962 LTN1O94822 1766 aa22.29■■□□□ 1.16
CROCCP2-202ENST00000412962 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
CROCCP2-202ENST00000412962 CHL1O00533 1208 aa22.28■■□□□ 1.16
CROCCP2-202ENST00000412962 ARHGAP45Q92619 1136 aa22.28■■□□□ 1.16
CROCCP2-202ENST00000412962 ZBTB40Q9NUA8 1239 aa22.28■■□□□ 1.16
CROCCP2-202ENST00000412962 PDZRN3Q9UPQ7 1066 aa22.27■■□□□ 1.16
CROCCP2-202ENST00000412962 CRB1P82279 1406 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms