RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 FHAD1B1AJZ9 1412 aa9.05□□□□□ -0.96
LINC00342-201ENST00000412393 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
LINC00342-201ENST00000412393 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
LINC00342-201ENST00000412393 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
LINC00342-201ENST00000412393 GDF11O95390 407 aa9.03□□□□□ -0.96
LINC00342-201ENST00000412393 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
LINC00342-201ENST00000412393 CEP170Q5SW79 1584 aa9.03□□□□□ -0.96
LINC00342-201ENST00000412393 SOBPA7XYQ1 873 aa9.02□□□□□ -0.97
LINC00342-201ENST00000412393 RASSF7Q02833 373 aa9.02□□□□□ -0.97
LINC00342-201ENST00000412393 LYPD8Q6UX82 237 aa9.02□□□□□ -0.97
LINC00342-201ENST00000412393 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
LINC00342-201ENST00000412393 NUP160Q12769 1436 aa9.01□□□□□ -0.97
LINC00342-201ENST00000412393 MEIOBQ8N635 442 aa9.01□□□□□ -0.97
LINC00342-201ENST00000412393 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
LINC00342-201ENST00000412393 BMP2P12643 396 aa9□□□□□ -0.97
LINC00342-201ENST00000412393 CTHP32929 405 aa9□□□□□ -0.97
LINC00342-201ENST00000412393 PLCB2Q00722 1185 aa9□□□□□ -0.97
LINC00342-201ENST00000412393 BPHLQ86WA6 291 aaPredicted RBP9□□□□□ -0.97
LINC00342-201ENST00000412393 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
LINC00342-201ENST00000412393 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
LINC00342-201ENST00000412393 IGHA1P01876 353 aa8.99□□□□□ -0.97
LINC00342-201ENST00000412393 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
LINC00342-201ENST00000412393 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
LINC00342-201ENST00000412393 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
LINC00342-201ENST00000412393 SHROOM2Q13796 1616 aa8.98□□□□□ -0.97
LINC00342-201ENST00000412393 KIF27Q86VH2 1401 aa8.98□□□□□ -0.97
LINC00342-201ENST00000412393 ARID5BQ14865 1188 aa8.98□□□□□ -0.97
LINC00342-201ENST00000412393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.98□□□□□ -0.97
LINC00342-201ENST00000412393 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
LINC00342-201ENST00000412393 CUL7Q14999 1698 aa8.97□□□□□ -0.97
LINC00342-201ENST00000412393 NDUFV2P19404 249 aa8.97□□□□□ -0.97
LINC00342-201ENST00000412393 GRM5P41594 1212 aa8.97□□□□□ -0.97
LINC00342-201ENST00000412393 ADAMTS8Q9UP79 889 aa8.97□□□□□ -0.97
LINC00342-201ENST00000412393 ERCC6L2Q5T890 1561 aa8.97□□□□□ -0.97
LINC00342-201ENST00000412393 NR3C2P08235 984 aa8.96□□□□□ -0.98
LINC00342-201ENST00000412393 ARMC2Q8NEN0 867 aa8.96□□□□□ -0.98
LINC00342-201ENST00000412393 NANOS1Q8WY41 292 aaKnown RBP8.96□□□□□ -0.98
LINC00342-201ENST00000412393 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
LINC00342-201ENST00000412393 F12P00748 615 aaPredicted RBP8.95□□□□□ -0.98
LINC00342-201ENST00000412393 FOXK2Q01167 660 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 AGERQ15109 404 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 FOXJ1Q92949 421 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 EMILIN1Q9Y6C2 1016 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 DNMT3AQ9Y6K1 912 aaPredicted RBP8.95□□□□□ -0.98
LINC00342-201ENST00000412393 IGF1RP08069 1367 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
LINC00342-201ENST00000412393 PRPF38BQ5VTL8 546 aaKnown RBP8.93□□□□□ -0.98
LINC00342-201ENST00000412393 KANK3Q6NY19 840 aa8.93□□□□□ -0.98
LINC00342-201ENST00000412393 PRG4Q92954 1404 aaPredicted RBP8.92□□□□□ -0.98
LINC00342-201ENST00000412393 AMHR2Q16671 573 aa8.92□□□□□ -0.98
LINC00342-201ENST00000412393 TRMT44Q8IYL2 757 aaKnown RBP8.92□□□□□ -0.98
LINC00342-201ENST00000412393 CNTNAP3BQ96NU0 1288 aa8.92□□□□□ -0.98
LINC00342-201ENST00000412393 C1QTNF2Q9BXJ5 285 aa8.92□□□□□ -0.98
LINC00342-201ENST00000412393 CNTNAP3Q9BZ76 1288 aa8.92□□□□□ -0.98
LINC00342-201ENST00000412393 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
LINC00342-201ENST00000412393 TTLL8A6PVC2 850 aa8.91□□□□□ -0.98
LINC00342-201ENST00000412393 KRT76Q01546 638 aa8.91□□□□□ -0.98
LINC00342-201ENST00000412393 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
LINC00342-201ENST00000412393 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
LINC00342-201ENST00000412393 CARMIL1Q5VZK9 1371 aa8.9□□□□□ -0.98
LINC00342-201ENST00000412393 NBPF14Q5TI25 921 aa8.9□□□□□ -0.98
LINC00342-201ENST00000412393 SVOPQ8N4V2 548 aa8.9□□□□□ -0.98
LINC00342-201ENST00000412393 MAP10Q9P2G4 905 aa8.9□□□□□ -0.98
LINC00342-201ENST00000412393 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.99
LINC00342-201ENST00000412393 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
LINC00342-201ENST00000412393 PTSQ03393 145 aa8.89□□□□□ -0.99
LINC00342-201ENST00000412393 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
LINC00342-201ENST00000412393 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
LINC00342-201ENST00000412393 CFAP99D6REC4 459 aa8.88□□□□□ -0.99
LINC00342-201ENST00000412393 ZNF385CQ66K41 422 aaPredicted RBP8.88□□□□□ -0.99
LINC00342-201ENST00000412393 SH3RF1Q7Z6J0 888 aa8.88□□□□□ -0.99
LINC00342-201ENST00000412393 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
LINC00342-201ENST00000412393 SCARF2Q96GP6 870 aaPredicted RBP8.88□□□□□ -0.99
LINC00342-201ENST00000412393 BEGAINQ9BUH8 593 aa8.88□□□□□ -0.99
LINC00342-201ENST00000412393 FSHRP23945 695 aa8.87□□□□□ -0.99
LINC00342-201ENST00000412393 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
LINC00342-201ENST00000412393 CCDC116Q8IYX3 515 aa8.87□□□□□ -0.99
LINC00342-201ENST00000412393 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
LINC00342-201ENST00000412393 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
LINC00342-201ENST00000412393 HRCP23327 699 aa8.86□□□□□ -0.99
LINC00342-201ENST00000412393 VASH1Q7L8A9 365 aaPredicted RBP8.86□□□□□ -0.99
LINC00342-201ENST00000412393 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
LINC00342-201ENST00000412393 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
LINC00342-201ENST00000412393 SPINT1O43278 529 aa8.85□□□□□ -0.99
LINC00342-201ENST00000412393 ARHGEF15O94989 841 aa8.85□□□□□ -0.99
LINC00342-201ENST00000412393 MARSP56192 900 aaKnown RBP8.84□□□□□ -0.99
LINC00342-201ENST00000412393 IQGAP2Q13576 1575 aa8.84□□□□□ -0.99
LINC00342-201ENST00000412393 GPAT2Q6NUI2 795 aa8.84□□□□□ -0.99
LINC00342-201ENST00000412393 Q6ZVU0 165 aa8.84□□□□□ -0.99
LINC00342-201ENST00000412393 KIF13AQ9H1H9 1805 aa8.84□□□□□ -0.99
LINC00342-201ENST00000412393 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
LINC00342-201ENST00000412393 SLC35F4A4IF30 521 aa8.83□□□□□ -1
LINC00342-201ENST00000412393 IRS1P35568 1242 aa8.83□□□□□ -1
LINC00342-201ENST00000412393 SH3BP5LQ7L8J4 393 aa8.83□□□□□ -1
LINC00342-201ENST00000412393 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
LINC00342-201ENST00000412393 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
LINC00342-201ENST00000412393 CTTNBP2Q8WZ74 1663 aa8.82□□□□□ -1
LINC00342-201ENST00000412393 ITGA6P23229 1130 aa8.82□□□□□ -1
LINC00342-201ENST00000412393 TUSC1Q2TAM9 212 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms